Cow genome map

Conread name: Emb1-C0005189_M18

Conread position: 4-359
Cow position: chr23:5389416-5389799 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 172

Conread position: 4-437
Cow position: chr23:4968804-4968363 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 76

Conread position: 5-409
Cow position: chr23:25358448-25358863 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 181

Conread position: 5-457
Cow position: chr23:533948-534412 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 12

Conread position: 6-355
Cow position: chr23:20388920-20388554 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 92

Conread position: 8-399
Cow position: chr23:29034032-29034449 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 170

Conread position: 8-443
Cow position: chr23:21445845-21446283 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 29

Conread position: 8-457
Cow position: chr23:11380538-11380045 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 340
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 76, 479

Conread position: 9-438
Cow position: chr23:13555707-13555259 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 135

Conread position: 9-457
Cow position: chr23:9874396-9874846 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 317
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 13

Conread position: 11-361
Cow position: chr23:29346036-29345666 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 165

Conread position: 11-387
Cow position: chr23:9652744-9652364 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 50, 113

Conread position: 11-402
Cow position: chr23:26948913-26949334 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 388

Conread position: 11-443
Cow position: chr23:29242665-29243102 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 320
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 28, 306

Conread position: 11-443
Cow position: chr23:33711494-33711932 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 305
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 19, 44

Conread position: 11-456
Cow position: chr23:3967824-3967368 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 107

Conread position: 11-457
Cow position: chr23:26795181-26794727 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 13-323
Cow position: chr23:1647356-1647678 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 22

Conread position: 13-359
Cow position: chr23:29271842-29272215 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 178

Conread position: 19-390
Cow position: chr23:6592962-6592580 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 20-238
Cow position: chr23:25531713-25531483 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 52

Conread position: 21-325
Cow position: chr23:27996866-27997190 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 21-332
Cow position: chr23:28053010-28053339 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 220

Conread position: 21-443
Cow position: chr23:3247321-3247759 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 98

Conread position: 22-454
Cow position: chr23:22804456-22804906 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 332

Conread position: 22-457
Cow position: chr23:344444-343992 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 155

Conread position: 24-161
Cow position: chr23:27529555-27529412 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 24-170
Cow position: chr23:37692590-37692739 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 24-210
Cow position: chr23:26741714-26741527 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 105

Conread position: 24-229
Cow position: chr23:14896067-14895854 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 163

Conread position: 24-327
Cow position: chr23:31601722-31601387 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 24-329
Cow position: chr23:10085447-10085120 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 31, 132

Conread position: 24-351
Cow position: chr23:18322683-18322334 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 227

Conread position: 24-360
Cow position: chr23:3262763-3262396 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 86

Conread position: 24-388
Cow position: chr23:39752850-39753237 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 153

Conread position: 24-393
Cow position: chr23:6995233-6994854 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 37

Conread position: 24-394
Cow position: chr23:1924097-1923708 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 155

Conread position: 24-399
Cow position: chr23:33601784-33601404 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 24-443
Cow position: chr23:186907-187349 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 156

Conread position: 24-457
Cow position: chr23:4972522-4972951 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 95

Conread position: 24-457
Cow position: chr23:9734155-9734606 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 36

Conread position: 24-457
Cow position: chr23:21336753-21336283 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 24-457
Cow position: chr23:22298280-22297844 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 24-457
Cow position: chr23:29471379-29470955 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 283
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 30

Conread position: 24-457
Cow position: chr23:29626150-29626612 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 150

Conread position: 24-457
Cow position: chr23:38455449-38454977 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 25-312
Cow position: chr23:6720539-6720236 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 93

Conread position: 25-416
Cow position: chr23:7596594-7596198 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 25-443
Cow position: chr23:13520193-13520619 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 56

Conread position: 27-272
Cow position: chr23:33233166-33232903 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 138, 81

Conread position: 27-456
Cow position: chr23:5162167-5162627 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 119

Conread position: 27-457
Cow position: chr23:41472352-41472811 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 33

Conread position: 28-321
Cow position: chr23:1803534-1803840 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 33

Conread position: 28-388
Cow position: chr23:15287394-15287016 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 325

Conread position: 29-212
Cow position: chr23:30656423-30656243 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 13

Conread position: 29-357
Cow position: chr23:19002327-19001970 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 287

Conread position: 29-382
Cow position: chr23:20171319-20171697 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 23

Conread position: 29-443
Cow position: chr23:26986533-26986097 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 84

Conread position: 29-457
Cow position: chr23:13511474-13511940 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 74

Conread position: 29-457
Cow position: chr23:25864941-25864508 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 138

Conread position: 29-457
Cow position: chr23:34356399-34356827 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 57

Conread position: 30-379
Cow position: chr23:31970778-31970413 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 69

Conread position: 30-397
Cow position: chr23:6172920-6172546 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 142

Conread position: 30-445
Cow position: chr23:20057125-20056710 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 30-457
Cow position: chr23:1337563-1337121 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 47

Conread position: 31-136
Cow position: chr23:13674174-13674067 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 67

Conread position: 31-206
Cow position: chr23:39309372-39309189 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 31-286
Cow position: chr23:587138-587411 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 244

Conread position: 31-320
Cow position: chr23:4608639-4608324 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 139

Conread position: 31-329
Cow position: chr23:5870440-5870127 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 30, 219

Conread position: 31-359
Cow position: chr23:20752756-20753107 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 29, 324

Conread position: 31-361
Cow position: chr23:39775474-39775829 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 31-405
Cow position: chr23:22396698-22396306 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 16

Conread position: 31-406
Cow position: chr23:14739193-14739590 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 141

Conread position: 31-409
Cow position: chr23:30662881-30662491 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 93, 19

Conread position: 31-442
Cow position: chr23:34315223-34314784 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 16

Conread position: 31-443
Cow position: chr23:10852795-10853217 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 31-443
Cow position: chr23:36172291-36172705 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 85

Conread position: 31-447
Cow position: chr23:1536071-1536494 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 297
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 274

Conread position: 31-457
Cow position: chr23:37065580-37066042 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 378

Conread position: 32-347
Cow position: chr23:10014289-10014618 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 78

Conread position: 32-367
Cow position: chr23:19636519-19636154 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 255

Conread position: 32-437
Cow position: chr23:4529148-4528695 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 428

Conread position: 34-303
Cow position: chr23:1670663-1670938 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 26, 84

Conread position: 35-299
Cow position: chr23:19979201-19978922 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 35-347
Cow position: chr23:15710329-15709983 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 24, 54

Conread position: 35-361
Cow position: chr23:26632547-26632907 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 141

Conread position: 35-361
Cow position: chr23:27563962-27563603 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 35-375
Cow position: chr23:40526221-40525873 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 33

Conread position: 35-397
Cow position: chr23:24509450-24509820 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 25, 45

Conread position: 35-443
Cow position: chr23:8293248-8293680 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 25, 133

Conread position: 35-443
Cow position: chr23:16583162-16582737 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 108

Conread position: 35-450
Cow position: chr23:24562122-24561734 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 100

Conread position: 35-455
Cow position: chr23:31493625-31494051 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 285
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 21, 107

Conread position: 35-457
Cow position: chr23:2282427-2282002 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 20, 51

Conread position: 35-457
Cow position: chr23:4579288-4578848 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 300
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 137

Conread position: 37-457
Cow position: chr23:39302464-39302880 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 119

Conread position: 38-279
Cow position: chr23:38854984-38854723 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 45

Conread position: 38-329
Cow position: chr23:18796941-18796636 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 182

Conread position: 38-356
Cow position: chr23:4562638-4562983 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 16

Conread position: 38-457
Cow position: chr23:14164650-14164190 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 38-457
Cow position: chr23:21789021-21788583 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 304
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 320

Conread position: 39-329
Cow position: chr23:8005991-8006309 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 39-416
Cow position: chr23:38208462-38208874 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 362

Conread position: 40-457
Cow position: chr23:18402534-18402077 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 43-183
Cow position: chr23:22574306-22574163 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 125

Conread position: 43-298
Cow position: chr23:670375-670650 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 134

Conread position: 43-361
Cow position: chr23:16700284-16699939 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 44-371
Cow position: chr23:13599098-13599452 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 141

Conread position: 46-456
Cow position: chr23:1885418-1884988 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 309

Conread position: 47-457
Cow position: chr23:22530658-22530251 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 127

Conread position: 48-457
Cow position: chr23:1398276-1397824 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 195

Conread position: 48-457
Cow position: chr23:25675923-25675511 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 12, 32

Conread position: 54-210
Cow position: chr23:11080850-11081005 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 95, 62

Conread position: 54-212
Cow position: chr23:7484848-7485009 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 59

Conread position: 54-269
Cow position: chr23:37992758-37992983 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 54-285
Cow position: chr23:35254469-35254227 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 134

Conread position: 54-329
Cow position: chr23:416929-417213 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 122

Conread position: 54-356
Cow position: chr23:5603502-5603187 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 85, 126

Conread position: 54-361
Cow position: chr23:27544601-27544930 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 123

Conread position: 54-366
Cow position: chr23:6223769-6224080 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 152, 84

Conread position: 54-399
Cow position: chr23:25378425-25378787 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 11

Conread position: 54-456
Cow position: chr23:15742868-15743276 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 56

Conread position: 55-457
Cow position: chr23:10416653-10416242 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 89, 300

Conread position: 57-401
Cow position: chr23:24704052-24704426 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 5

Conread position: 58-273
Cow position: chr23:14189785-14189556 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 9

Conread position: 59-219
Cow position: chr23:4421203-4421042 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 127, 80

Conread position: 59-319
Cow position: chr23:3955193-3955469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 58

Conread position: 60-457
Cow position: chr23:4499361-4498946 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 277
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 59

Conread position: 61-438
Cow position: chr23:5723319-5723702 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 258

Conread position: 63-455
Cow position: chr23:16690284-16689881 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 267
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 309

Conread position: 67-288
Cow position: chr23:1068531-1068295 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 104

Conread position: 72-211
Cow position: chr23:4523192-4523045 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 72-409
Cow position: chr23:40648941-40648588 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 108

Conread position: 73-399
Cow position: chr23:18296595-18296940 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 311

Conread position: 78-404
Cow position: chr23:1742150-1742493 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 37

Conread position: 78-420
Cow position: chr23:23409539-23409890 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 54

Conread position: 82-456
Cow position: chr23:1189106-1188735 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 221

Conread position: 84-285
Cow position: chr23:39028583-39028798 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 57

Conread position: 84-388
Cow position: chr23:3191325-3190997 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 57

Conread position: 85-443
Cow position: chr23:36017942-36018335 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 85-457
Cow position: chr23:40443665-40444042 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 39, 263

Conread position: 87-351
Cow position: chr23:30999377-30999657 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 87

Conread position: 88-329
Cow position: chr23:38973649-38973913 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 53

Conread position: 91-347
Cow position: chr23:19371265-19370986 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 89

Conread position: 91-402
Cow position: chr23:1636088-1636407 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 50

Conread position: 95-328
Cow position: chr23:33569945-33570199 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 84

Conread position: 97-443
Cow position: chr23:39813321-39813672 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 69

Conread position: 98-404
Cow position: chr23:4104219-4104533 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 8

Conread position: 103-443
Cow position: chr23:1759089-1759417 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 130

Conread position: 105-455
Cow position: chr23:3282295-3281926 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 63

Conread position: 106-457
Cow position: chr23:12334032-12334408 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 13

Conread position: 108-457
Cow position: chr23:1743631-1743972 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 74

Conread position: 111-329
Cow position: chr23:1921395-1921161 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 28

Conread position: 111-440
Cow position: chr23:39083286-39083620 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 9

Conread position: 115-325
Cow position: chr23:40844483-40844712 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 82

Conread position: 116-423
Cow position: chr23:33622317-33621997 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 239

Conread position: 116-457
Cow position: chr23:1767661-1768037 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 61

Conread position: 116-457
Cow position: chr23:18416211-18415871 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 23

Conread position: 119-457
Cow position: chr23:1655730-1656080 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 10

Conread position: 121-383
Cow position: chr23:19774614-19774892 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 45

Conread position: 125-441
Cow position: chr23:4327850-4327523 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 121

Conread position: 125-457
Cow position: chr23:12091519-12091174 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 124

Conread position: 138-438
Cow position: chr23:33153331-33153021 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 27

Conread position: 138-457
Cow position: chr23:37895-38216 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 145, 67

Conread position: 138-457
Cow position: chr23:799809-799480 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 93

Conread position: 138-457
Cow position: chr23:35239204-35239537 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 201

Conread position: 141-457
Cow position: chr23:5437137-5436815 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 230

Conread position: 144-456
Cow position: chr23:30950824-30951162 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 21

Conread position: 150-443
Cow position: chr23:11081128-11081428 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 182

Conread position: 154-457
Cow position: chr23:3890692-3890386 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 172

Conread position: 161-361
Cow position: chr23:24480070-24479860 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 22

Conread position: 163-443
Cow position: chr23:1701053-1701344 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 192

Conread position: 163-457
Cow position: chr23:307340-307644 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 75

Conread position: 165-437
Cow position: chr23:306409-306689 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 73

Conread position: 165-443
Cow position: chr23:3245031-3244745 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 181

Conread position: 165-457
Cow position: chr23:5436756-5436454 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 44, 215

Conread position: 172-383
Cow position: chr23:6035333-6035552 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 200

Conread position: 202-328
Cow position: chr23:19173424-19173299 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 202-399
Cow position: chr23:20002184-20002384 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 138

Conread position: 202-457
Cow position: chr23:769624-769355 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 146

Conread position: 202-457
Cow position: chr23:3522680-3522929 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 121

Conread position: 202-457
Cow position: chr23:16780620-16780370 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 31

Conread position: 214-457
Cow position: chr23:35929898-35930134 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 37

Conread position: 217-409
Cow position: chr23:3244522-3244315 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 217-438
Cow position: chr23:26283669-26283894 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 8

Conread position: 218-457
Cow position: chr23:4877302-4877557 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 144

Conread position: 229-422
Cow position: chr23:29479848-29480038 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 141

Conread position: 234-361
Cow position: chr23:30655843-30655711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 235-443
Cow position: chr23:24701112-24700907 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 46

Conread position: 246-457
Cow position: chr23:22238843-22238634 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 112

Conread position: 250-443
Cow position: chr23:35656395-35656579 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 8

Conread position: 250-452
Cow position: chr23:25938404-25938194 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 250-457
Cow position: chr23:57181-56969 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 93

Conread position: 250-457
Cow position: chr23:28529965-28529765 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 43

Conread position: 253-413
Cow position: chr23:4241652-4241487 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 253-443
Cow position: chr23:3234796-3234608 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 89

Conread position: 256-457
Cow position: chr23:32621272-32621474 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 109

Conread position: 258-457
Cow position: chr23:13674041-13673827 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 262-457
Cow position: chr23:3835600-3835395 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 262-457
Cow position: chr23:21423762-21423952 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 104

Conread position: 270-457
Cow position: chr23:23114060-23114266 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 122

Conread position: 276-457
Cow position: chr23:19179367-19179183 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 56

Conread position: 291-457
Cow position: chr23:29972415-29972585 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 77

Conread position: 305-457
Cow position: chr23:19739524-19739376 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 137, 26

Show alignments to all cow chromosomes.