• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Emb1-C0005189_M18
        

               
Conread position:
               
2-329
               

               
Cow position:
               
chr28:25070835-25071187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr28:16450977-16450759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr28:27428470-27428723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr28:5366414-5366079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr28:25806311-25806785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
5-438
               

               
Cow position:
               
chr28:23793578-23793144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
5-443
               

               
Cow position:
               
chr28:29434702-29434235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr28:20124504-20124969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr28:24996866-24996430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr28:13176957-13176584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr28:28076677-28076390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
11-394
               

               
Cow position:
               
chr28:25796843-25797251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 246
               

               
Conread position:
               
11-410
               

               
Cow position:
               
chr28:4841670-4841234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr28:19026274-19025856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
13-210
               

               
Cow position:
               
chr28:34150804-34150594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr28:11827225-11827466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 231
               

               
Conread position:
               
16-360
               

               
Cow position:
               
chr28:13865579-13865943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
16-457
               

               
Cow position:
               
chr28:14657432-14657904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 251
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr28:11451734-11451493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr28:32300627-32300256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr28:16253120-16252813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
19-329
               

               
Cow position:
               
chr28:10682083-10681757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
21-359
               

               
Cow position:
               
chr28:23675881-23676241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
21-385
               

               
Cow position:
               
chr28:7865065-7865452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
21-457
               

               
Cow position:
               
chr28:7698244-7697791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
21-457
               

               
Cow position:
               
chr28:25701121-25700682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 63
               

               
Conread position:
               
22-314
               

               
Cow position:
               
chr28:18717387-18717077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
22-335
               

               
Cow position:
               
chr28:26269067-26269398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
22-410
               

               
Cow position:
               
chr28:31110267-31109857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 337
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr28:13371428-13371244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr28:23530604-23530798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr28:17738339-17738137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr28:22304594-22304790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr28:24603919-24604133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr28:16441127-16441341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
24-280
               

               
Cow position:
               
chr28:9390625-9390348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr28:5792442-5792776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr28:7549322-7548990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr28:25762769-25763091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr28:26151760-26152083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr28:7228643-7228285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
24-365
               

               
Cow position:
               
chr28:3144150-3143769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
24-386
               

               
Cow position:
               
chr28:3914450-3914841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 360
               

               
Conread position:
               
24-387
               

               
Cow position:
               
chr28:18591010-18591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
24-388
               

               
Cow position:
               
chr28:21598513-21598124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
24-393
               

               
Cow position:
               
chr28:3408477-3408084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 209
               

               
Conread position:
               
24-393
               

               
Cow position:
               
chr28:5817587-5817978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
24-400
               

               
Cow position:
               
chr28:5771106-5771504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
24-400
               

               
Cow position:
               
chr28:24966128-24966525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
24-410
               

               
Cow position:
               
chr28:6971599-6971198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
24-423
               

               
Cow position:
               
chr28:15601004-15601431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
24-441
               

               
Cow position:
               
chr28:9426602-9426182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
24-441
               

               
Cow position:
               
chr28:16211357-16210931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr28:21868192-21868629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr28:24672013-24672440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr28:25727121-25727545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr28:30293850-30293413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 262
               

               
Conread position:
               
24-456
               

               
Cow position:
               
chr28:21363498-21363927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr28:2961082-2960628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr28:26743362-26743819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 229
               

               
Conread position:
               
25-286
               

               
Cow position:
               
chr28:4022125-4022409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr28:17316599-17316903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr28:7144529-7144842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 284
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr28:5203943-5204333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 134
               

               
Conread position:
               
25-457
               

               
Cow position:
               
chr28:10616210-10615762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
26-457
               

               
Cow position:
               
chr28:27218062-27218513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
27-303
               

               
Cow position:
               
chr28:17287967-17288254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr28:21502138-21502454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
27-363
               

               
Cow position:
               
chr28:11786965-11786610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr28:5931096-5931476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
27-438
               

               
Cow position:
               
chr28:25399633-25400043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
28-167
               

               
Cow position:
               
chr28:19564849-19564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
29-248
               

               
Cow position:
               
chr28:7590438-7590202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-325
               

               
Cow position:
               
chr28:13267525-13267853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-325
               

               
Cow position:
               
chr28:26533287-26533607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 228
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr28:16085070-16085432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
29-393
               

               
Cow position:
               
chr28:23410579-23410192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr28:26684860-26685260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
29-456
               

               
Cow position:
               
chr28:4308153-4307706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr28:4057732-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
31-143
               

               
Cow position:
               
chr28:12593382-12593494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
31-274
               

               
Cow position:
               
chr28:26784720-26784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
31-286
               

               
Cow position:
               
chr28:15375079-15374802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr28:12942132-12942440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr28:2800990-2801294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr28:5826695-5827035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
31-361
               

               
Cow position:
               
chr28:616150-616486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
31-371
               

               
Cow position:
               
chr28:14933709-14934072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
29, 221
               

               
Conread position:
               
31-383
               

               
Cow position:
               
chr28:23007981-23007609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
31-409
               

               
Cow position:
               
chr28:7684930-7684557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
31-413
               

               
Cow position:
               
chr28:20313022-20313426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr28:12964324-12964754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr28:16919417-16919002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
31-444
               

               
Cow position:
               
chr28:6059726-6059288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 349
               

               
Conread position:
               
32-371
               

               
Cow position:
               
chr28:3078930-3078568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr28:5236852-5236407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 325
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr28:34229977-34230419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 321
               

               
Conread position:
               
33-457
               

               
Cow position:
               
chr28:750976-751416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
35-267
               

               
Cow position:
               
chr28:10879526-10879763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr28:19222846-19222580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 204
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr28:18462861-18462557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
35-321
               

               
Cow position:
               
chr28:15263974-15263657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
35-363
               

               
Cow position:
               
chr28:26922613-26922261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
35-371
               

               
Cow position:
               
chr28:22500730-22500385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
35-404
               

               
Cow position:
               
chr28:7268185-7267801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
35-441
               

               
Cow position:
               
chr28:2898746-2899168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 219
               

               
Conread position:
               
35-441
               

               
Cow position:
               
chr28:26103466-26103868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 306
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr28:8408487-8408930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
38-328
               

               
Cow position:
               
chr28:10529729-10529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
38-400
               

               
Cow position:
               
chr28:4938592-4938940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
38-443
               

               
Cow position:
               
chr28:19222391-19221971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
38-457
               

               
Cow position:
               
chr28:28766156-28765715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
19, 330
               

               
Conread position:
               
39-153
               

               
Cow position:
               
chr28:1537459-1537582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
39-394
               

               
Cow position:
               
chr28:21354979-21355363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
39-457
               

               
Cow position:
               
chr28:4282737-4282301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 158
               

               
Conread position:
               
40-457
               

               
Cow position:
               
chr28:16109700-16110156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 191
               

               
Conread position:
               
42-400
               

               
Cow position:
               
chr28:25249113-25249488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
43-443
               

               
Cow position:
               
chr28:22332308-22332703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
43-446
               

               
Cow position:
               
chr28:23459906-23460319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
91, 200
               

               
Conread position:
               
43-457
               

               
Cow position:
               
chr28:1837755-1838184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
44-457
               

               
Cow position:
               
chr28:26220021-26220468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
45-400
               

               
Cow position:
               
chr28:9636696-9636319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
46-452
               

               
Cow position:
               
chr28:18354556-18354130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
47-457
               

               
Cow position:
               
chr28:9285615-9285189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr28:21380641-21380956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
48-443
               

               
Cow position:
               
chr28:34430663-34430251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 335
               

               
Conread position:
               
48-457
               

               
Cow position:
               
chr28:12951198-12951604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
51-335
               

               
Cow position:
               
chr28:18278585-18278291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
52-347
               

               
Cow position:
               
chr28:25282974-25283285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
53-202
               

               
Cow position:
               
chr28:31142197-31142041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
54-443
               

               
Cow position:
               
chr28:9099707-9100101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr28:10053566-10053144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 315
               

               
Conread position:
               
55-206
               

               
Cow position:
               
chr28:13447482-13447626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
55-457
               

               
Cow position:
               
chr28:8347508-8347922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 303
               

               
Conread position:
               
57-206
               

               
Cow position:
               
chr28:2888205-2888360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr28:4016306-4016711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr28:5144746-5144326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 295
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr28:11818184-11817758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
60-440
               

               
Cow position:
               
chr28:18625001-18625406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
69, 332
               

               
Conread position:
               
61-457
               

               
Cow position:
               
chr28:5188622-5188242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
72-457
               

               
Cow position:
               
chr28:5437301-5436898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
75-406
               

               
Cow position:
               
chr28:4090251-4089914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
84-295
               

               
Cow position:
               
chr28:25459328-25459564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
84-443
               

               
Cow position:
               
chr28:4138867-4138495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
84-457
               

               
Cow position:
               
chr28:4158754-4159152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
84-457
               

               
Cow position:
               
chr28:10844921-10845290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
85-457
               

               
Cow position:
               
chr28:5224516-5224892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
87-442
               

               
Cow position:
               
chr28:4881440-4881072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 301
               

               
Conread position:
               
90-457
               

               
Cow position:
               
chr28:26982938-26982548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
34, 270
               

               
Conread position:
               
92-229
               

               
Cow position:
               
chr28:22279382-22279245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
92-371
               

               
Cow position:
               
chr28:23724645-23724344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
94-286
               

               
Cow position:
               
chr28:118243-118029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
95-443
               

               
Cow position:
               
chr28:11829129-11828787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
96-443
               

               
Cow position:
               
chr28:21046744-21046417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
96-457
               

               
Cow position:
               
chr28:11866855-11866480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
98-457
               

               
Cow position:
               
chr28:2752684-2752288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
101-298
               

               
Cow position:
               
chr28:28903847-28903630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr28:18186379-18186656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
104-392
               

               
Cow position:
               
chr28:25728028-25728331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
105-457
               

               
Cow position:
               
chr28:20409216-20409579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
106-303
               

               
Cow position:
               
chr28:9928455-9928253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
107-457
               

               
Cow position:
               
chr28:4643939-4643582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 246
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr28:32174466-32174784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
121-438
               

               
Cow position:
               
chr28:1538012-1538335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 220
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr28:2774909-2775115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr28:32365693-32365949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
123-457
               

               
Cow position:
               
chr28:13527051-13527386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
138-394
               

               
Cow position:
               
chr28:4355410-4355678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
138-410
               

               
Cow position:
               
chr28:27161468-27161179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
138-457
               

               
Cow position:
               
chr28:9812145-9812471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
138-457
               

               
Cow position:
               
chr28:19262727-19262396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
139-457
               

               
Cow position:
               
chr28:7009112-7008793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
142-457
               

               
Cow position:
               
chr28:3449165-3449497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
145-457
               

               
Cow position:
               
chr28:10495408-10495112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
163-457
               

               
Cow position:
               
chr28:18370122-18369825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
165-457
               

               
Cow position:
               
chr28:3011385-3011079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 184
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr28:11307612-11307330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
177-438
               

               
Cow position:
               
chr28:24706810-24707075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
183-457
               

               
Cow position:
               
chr28:19564318-19564047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
194-410
               

               
Cow position:
               
chr28:8147939-8147718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
194-443
               

               
Cow position:
               
chr28:25195636-25195894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
202-361
               

               
Cow position:
               
chr28:30865351-30865522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
202-421
               

               
Cow position:
               
chr28:3161021-3160793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr28:17012359-17012117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
203-438
               

               
Cow position:
               
chr28:7437526-7437299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
203-456
               

               
Cow position:
               
chr28:5867665-5867927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
204-426
               

               
Cow position:
               
chr28:4823541-4823766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
205-457
               

               
Cow position:
               
chr28:7350593-7350838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
208-457
               

               
Cow position:
               
chr28:20759763-20759505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 168
               

               
Conread position:
               
209-457
               

               
Cow position:
               
chr28:4873409-4873136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr28:20397430-20397196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 161
               

               
Conread position:
               
213-397
               

               
Cow position:
               
chr28:8149682-8149491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
223-443
               

               
Cow position:
               
chr28:5235835-5236046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
243-457
               

               
Cow position:
               
chr28:11398819-11398606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
244-457
               

               
Cow position:
               
chr28:5630077-5630287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
244-457
               

               
Cow position:
               
chr28:18770063-18770275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr28:17739813-17740013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
255-457
               

               
Cow position:
               
chr28:19039029-19038830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
257-438
               

               
Cow position:
               
chr28:32179689-32179875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
262-443
               

               
Cow position:
               
chr28:8827162-8827336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
262-457
               

               
Cow position:
               
chr28:24064898-24064704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
263-442
               

               
Cow position:
               
chr28:9384289-9384120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
263-457
               

               
Cow position:
               
chr28:8259626-8259820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
270-443
               

               
Cow position:
               
chr28:3137548-3137725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr28:8716376-8716192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr28:19024444-19024638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
278-457
               

               
Cow position:
               
chr28:5245370-5245547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
282-457
               

               
Cow position:
               
chr28:11827705-11827876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 57
               
Show alignments to all cow chromosomes.