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Cow genome map

           
Conread name:
           
Emb1-C0005189_M18
        

               
Conread position:
               
4-286
               

               
Cow position:
               
chr7:12212850-12212541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr7:25703462-25703123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr7:40321245-40321690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 346
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr7:34554016-34554471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr7:19616942-19616721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr7:43784384-43784620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr7:40311579-40311288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr7:41445119-41445429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr7:62361631-62361913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr7:48443999-48443674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr7:45748075-45747712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr7:19230744-19230371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
5-404
               

               
Cow position:
               
chr7:42244939-42244521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 171
               

               
Conread position:
               
5-443
               

               
Cow position:
               
chr7:34568958-34569398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
5-443
               

               
Cow position:
               
chr7:37951940-37952405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
5-455
               

               
Cow position:
               
chr7:25415154-25415620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr7:20176944-20176458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr7:25860431-25859977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr7:64573303-64572835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 350
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr7:34223449-34223799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr7:38060673-38060249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr7:33719811-33720260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr7:45658625-45658379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr7:44496790-44496470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
7-457
               

               
Cow position:
               
chr7:52383213-52382732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr7:39930057-39930407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr7:69066458-69066838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 172
               

               
Conread position:
               
8-393
               

               
Cow position:
               
chr7:8776959-8777379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 383
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr7:27283439-27283861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 177
               

               
Conread position:
               
8-457
               

               
Cow position:
               
chr7:25195296-25195775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
8-457
               

               
Cow position:
               
chr7:25223362-25223828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr7:53786198-53785815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
10-214
               

               
Cow position:
               
chr7:26838427-26838630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
11-207
               

               
Cow position:
               
chr7:29346173-29345967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr7:25867742-25867527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr7:20827852-20827639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr7:40991474-40991771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr7:40405615-40405949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
11-393
               

               
Cow position:
               
chr7:14459152-14458756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 180
               

               
Conread position:
               
11-401
               

               
Cow position:
               
chr7:20164-20586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr7:16022064-16022517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr7:37455085-37455550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 369
               

               
Conread position:
               
13-331
               

               
Cow position:
               
chr7:20147566-20147233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr7:17756804-17757145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr7:52718866-52718463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr7:52724405-52724608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
14-329
               

               
Cow position:
               
chr7:64229129-64228787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
15-457
               

               
Cow position:
               
chr7:59688312-59688761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr7:60748955-60749185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
17-359
               

               
Cow position:
               
chr7:31881457-31881800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr7:50371871-50372237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
19-391
               

               
Cow position:
               
chr7:64948892-64949273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
19-404
               

               
Cow position:
               
chr7:33298649-33298255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
216, 43
               

               
Conread position:
               
21-325
               

               
Cow position:
               
chr7:43658235-43658566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
21-457
               

               
Cow position:
               
chr7:14520264-14519817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
22-210
               

               
Cow position:
               
chr7:18872987-18873183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr7:42460209-42460410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
22-360
               

               
Cow position:
               
chr7:67819895-67820257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr7:16917835-16918197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
22-368
               

               
Cow position:
               
chr7:11870055-11869691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
22-398
               

               
Cow position:
               
chr7:66894766-66894368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 338
               

               
Conread position:
               
22-416
               

               
Cow position:
               
chr7:38081930-38082349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
22-427
               

               
Cow position:
               
chr7:1558510-1558935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
22-441
               

               
Cow position:
               
chr7:2172531-2172980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
22-443
               

               
Cow position:
               
chr7:9146420-9146858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 171
               

               
Conread position:
               
22-451
               

               
Cow position:
               
chr7:21240334-21239908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 316
               

               
Conread position:
               
22-452
               

               
Cow position:
               
chr7:47513915-47513467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
22-457
               

               
Cow position:
               
chr7:42335126-42335545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
23-316
               

               
Cow position:
               
chr7:39518076-39518385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
23-402
               

               
Cow position:
               
chr7:30932201-30931800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
23-448
               

               
Cow position:
               
chr7:39164163-39164609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr7:23472046-23471855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr7:26888188-26887994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
24-207
               

               
Cow position:
               
chr7:40571044-40571239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr7:20081287-20081092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr7:210838-211060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr7:27127589-27127367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
24-247
               

               
Cow position:
               
chr7:3728867-3729099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 219
               

               
Conread position:
               
24-303
               

               
Cow position:
               
chr7:53361600-53361313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-325
               

               
Cow position:
               
chr7:9074836-9075153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr7:39939515-39939841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr7:53097375-53097696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr7:22624329-22623981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
24-360
               

               
Cow position:
               
chr7:11176929-11176588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr7:40894297-40894684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr7:53988837-53989192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chr7:6154759-6155123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 231
               

               
Conread position:
               
24-370
               

               
Cow position:
               
chr7:6057906-6058278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
24-385
               

               
Cow position:
               
chr7:37718332-37718695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
24-393
               

               
Cow position:
               
chr7:42296293-42295904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
24-394
               

               
Cow position:
               
chr7:14536495-14536108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
24-404
               

               
Cow position:
               
chr7:59843979-59843568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
24-415
               

               
Cow position:
               
chr7:57259254-57258827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
24-443
               

               
Cow position:
               
chr7:18388622-18388187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 369
               

               
Conread position:
               
24-451
               

               
Cow position:
               
chr7:32914888-32915345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:1721192-1720740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:9136615-9137075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:29474469-29474882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:32894477-32894014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:34422485-34422028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:40008594-40009053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 370
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:44454489-44454042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:48722129-48721680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:58967051-58967495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr7:60483646-60483207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
25-354
               

               
Cow position:
               
chr7:21649878-21650234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
25-443
               

               
Cow position:
               
chr7:17782895-17782483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
25-457
               

               
Cow position:
               
chr7:40067435-40067905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 439
               

               
Conread position:
               
25-457
               

               
Cow position:
               
chr7:40953085-40952620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
27-148
               

               
Cow position:
               
chr7:38144879-38144755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
27-167
               

               
Cow position:
               
chr7:43484780-43484634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
27-250
               

               
Cow position:
               
chr7:27603776-27603540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
27-359
               

               
Cow position:
               
chr7:36830442-36830791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
27-361
               

               
Cow position:
               
chr7:65122123-65122474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 284
               

               
Conread position:
               
27-382
               

               
Cow position:
               
chr7:26632032-26631655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 327
               

               
Conread position:
               
27-408
               

               
Cow position:
               
chr7:25512341-25511928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr7:15566553-15566949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
27-441
               

               
Cow position:
               
chr7:63112992-63112570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
27-457
               

               
Cow position:
               
chr7:17816538-17816999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
27-457
               

               
Cow position:
               
chr7:52294914-52295342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 152
               

               
Conread position:
               
28-288
               

               
Cow position:
               
chr7:65818675-65818398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr7:39169682-39170128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 364
               

               
Conread position:
               
29-273
               

               
Cow position:
               
chr7:16220344-16220080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
29-323
               

               
Cow position:
               
chr7:4418685-4418360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
29-358
               

               
Cow position:
               
chr7:45592821-45593167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
29-359
               

               
Cow position:
               
chr7:7507343-7507689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
29-366
               

               
Cow position:
               
chr7:28563601-28563244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
29-368
               

               
Cow position:
               
chr7:10122495-10122841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr7:19982057-19981692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
29-439
               

               
Cow position:
               
chr7:39149718-39150158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 346
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr7:30276514-30276963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr7:33697754-33698178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr7:26911655-26911217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 319
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr7:13593559-13594000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr7:34433497-34433054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr7:47775651-47776089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 219
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr7:48020218-48020650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr7:10069924-10069743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr7:28584032-28584216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr7:41299645-41299463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr7:38613776-38613592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
31-233
               

               
Cow position:
               
chr7:63085345-63085559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr7:53034529-53034312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr7:23619302-23619073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
31-249
               

               
Cow position:
               
chr7:42431607-42431846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
31-279
               

               
Cow position:
               
chr7:39529220-39528940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
31-281
               

               
Cow position:
               
chr7:35652296-35652019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
31-286
               

               
Cow position:
               
chr7:33804760-33805028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
31-292
               

               
Cow position:
               
chr7:53612929-53613208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
31-297
               

               
Cow position:
               
chr7:39161495-39161783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
31-309
               

               
Cow position:
               
chr7:58427879-58428160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
31-313
               

               
Cow position:
               
chr7:64236506-64236198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr7:14076487-14076177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr7:44590063-44589753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
31-347
               

               
Cow position:
               
chr7:19267586-19267242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
31-353
               

               
Cow position:
               
chr7:2884127-2884471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
31-355
               

               
Cow position:
               
chr7:68867892-68868231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
31-360
               

               
Cow position:
               
chr7:58170524-58170880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
31-361
               

               
Cow position:
               
chr7:32711197-32710843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 291
               

               
Conread position:
               
31-361
               

               
Cow position:
               
chr7:35893194-35893558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
31-361
               

               
Cow position:
               
chr7:49648146-49648499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
31-431
               

               
Cow position:
               
chr7:23568957-23568539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
31-431
               

               
Cow position:
               
chr7:45157916-45158327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr7:6706080-6706512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 356
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr7:39103643-39103227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
31-447
               

               
Cow position:
               
chr7:10551185-10550739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
31-451
               

               
Cow position:
               
chr7:16667372-16667790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:15755666-15755219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:31694833-31694406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:33385717-33386141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:40693677-40694122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:51319583-51320067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:52776970-52776537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 318
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr7:66748741-66748307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
32-205
               

               
Cow position:
               
chr7:11160217-11160032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
32-206
               

               
Cow position:
               
chr7:39147581-39147763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr7:25393074-25393259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr7:27136281-27136471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 146
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr7:28090025-28090202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr7:205539-205804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
32-365
               

               
Cow position:
               
chr7:37142580-37142227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 236
               

               
Conread position:
               
32-380
               

               
Cow position:
               
chr7:40566858-40567223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
32-388
               

               
Cow position:
               
chr7:39451346-39450978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
32-442
               

               
Cow position:
               
chr7:47932011-47931585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr7:42223162-42222716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 337
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr7:43109747-43109312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr7:58302161-58301715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
33-242
               

               
Cow position:
               
chr7:67433711-67433922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr7:12202126-12201731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr7:32221805-32221948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr7:12994950-12995130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
35-286
               

               
Cow position:
               
chr7:26915101-26915375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
35-293
               

               
Cow position:
               
chr7:44095154-44094869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr7:19096243-19095957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr7:3283152-3283497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr7:3311632-3311979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr7:59245750-59246095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr7:25445188-25445537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr7:39903891-39904237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
35-393
               

               
Cow position:
               
chr7:44596902-44596534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
35-394
               

               
Cow position:
               
chr7:20537150-20537535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
35-397
               

               
Cow position:
               
chr7:600131-600494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
35-400
               

               
Cow position:
               
chr7:48406713-48406319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 363
               

               
Conread position:
               
35-437
               

               
Cow position:
               
chr7:14450142-14450538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr7:19798145-19797717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr7:42894238-42894667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
35-443
               

               
Cow position:
               
chr7:63968414-63967974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
35-456
               

               
Cow position:
               
chr7:46823455-46823897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 322
               

               
Conread position:
               
35-457
               

               
Cow position:
               
chr7:11066263-11066696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 323
               

               
Conread position:
               
35-457
               

               
Cow position:
               
chr7:15569832-15570262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
35-457
               

               
Cow position:
               
chr7:29509741-29510174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
37-457
               

               
Cow position:
               
chr7:41315649-41315200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr7:6041780-6041946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr7:40709899-40710096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr7:39401745-39401967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
38-248
               

               
Cow position:
               
chr7:61551702-61551916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
38-249
               

               
Cow position:
               
chr7:20415513-20415287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 211
               

               
Conread position:
               
38-293
               

               
Cow position:
               
chr7:49942632-49942363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
38-297
               

               
Cow position:
               
chr7:10115688-10115413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
38-298
               

               
Cow position:
               
chr7:39042394-39042668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr7:24778321-24778005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
38-360
               

               
Cow position:
               
chr7:2896551-2896901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr7:15855518-15855189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr7:24220462-24220810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr7:45927364-45927033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr7:59558372-59558041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 176
               

               
Conread position:
               
38-363
               

               
Cow position:
               
chr7:12408450-12408097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
38-390
               

               
Cow position:
               
chr7:4130000-4129615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr7:14542261-14541881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr7:11783628-11783226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
38-443
               

               
Cow position:
               
chr7:3026933-3026507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 325
               

               
Conread position:
               
38-457
               

               
Cow position:
               
chr7:41293957-41293524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 335
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr7:63946780-63946416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
39-398
               

               
Cow position:
               
chr7:38696639-38697015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr7:3336758-3336372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
40-359
               

               
Cow position:
               
chr7:62102386-62102733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 343
               

               
Conread position:
               
40-393
               

               
Cow position:
               
chr7:18248018-18247661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
41-410
               

               
Cow position:
               
chr7:44986451-44986838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
41-457
               

               
Cow position:
               
chr7:33280196-33279763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
42-248
               

               
Cow position:
               
chr7:14712399-14712186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
43-303
               

               
Cow position:
               
chr7:40303468-40303190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
43-361
               

               
Cow position:
               
chr7:256012-255677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 271
               

               
Conread position:
               
43-361
               

               
Cow position:
               
chr7:4892663-4893001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
14, 278
               

               
Conread position:
               
43-457
               

               
Cow position:
               
chr7:23205836-23205403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
43-457
               

               
Cow position:
               
chr7:58863084-58862651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
43-457
               

               
Cow position:
               
chr7:68173358-68172932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr7:11872801-11872464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
44-398
               

               
Cow position:
               
chr7:50066316-50065943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
46-365
               

               
Cow position:
               
chr7:59075651-59075996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
46-400
               

               
Cow position:
               
chr7:1761517-1761906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
48-400
               

               
Cow position:
               
chr7:35286828-35286467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
48-447
               

               
Cow position:
               
chr7:39444801-39444404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
51-360
               

               
Cow position:
               
chr7:52536444-52536112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
52-444
               

               
Cow position:
               
chr7:30156151-30155741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 317
               

               
Conread position:
               
53-435
               

               
Cow position:
               
chr7:48714656-48715058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 305
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr7:41879692-41879409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
54-361
               

               
Cow position:
               
chr7:32079268-32079593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
54-383
               

               
Cow position:
               
chr7:11011883-11011521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 190
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr7:59168087-59168424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
154, 69
               

               
Conread position:
               
54-440
               

               
Cow position:
               
chr7:62602993-62603386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
54-447
               

               
Cow position:
               
chr7:39144499-39144905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 317
               

               
Conread position:
               
54-450
               

               
Cow position:
               
chr7:26737530-26737125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
54-456
               

               
Cow position:
               
chr7:14029145-14029530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr7:249696-249280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr7:37697613-37698033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 306
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr7:39094105-39093698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr7:55688388-55687957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
91, 106
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr7:64135655-64135243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 326
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr7:11715517-11715725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr7:14174595-14174276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr7:34084437-34084041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
70, 291
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr7:67872995-67873421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 312
               

               
Conread position:
               
60-456
               

               
Cow position:
               
chr7:51039247-51039656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
62-329
               

               
Cow position:
               
chr7:47414083-47414367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
62-331
               

               
Cow position:
               
chr7:24932596-24932311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 261
               

               
Conread position:
               
68-391
               

               
Cow position:
               
chr7:9926887-9926567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
68-457
               

               
Cow position:
               
chr7:39129769-39129376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr7:59941446-59941698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
70-318
               

               
Cow position:
               
chr7:32372684-32372951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
70-398
               

               
Cow position:
               
chr7:56347991-56347648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr7:61790529-61790210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr7:11422466-11422717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
75-329
               

               
Cow position:
               
chr7:63914031-63913779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 209
               

               
Conread position:
               
76-347
               

               
Cow position:
               
chr7:40051928-40051639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
76-457
               

               
Cow position:
               
chr7:41464294-41464712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 335
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr7:24146477-24146649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
84-325
               

               
Cow position:
               
chr7:46106047-46105781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
84-361
               

               
Cow position:
               
chr7:1375986-1376276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
84-455
               

               
Cow position:
               
chr7:20220000-20219619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
84-457
               

               
Cow position:
               
chr7:9800192-9800604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
84-457
               

               
Cow position:
               
chr7:53763746-53763366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
85-400
               

               
Cow position:
               
chr7:31497558-31497885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
85-457
               

               
Cow position:
               
chr7:31503690-31504074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr7:24564778-24564566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
87-283
               

               
Cow position:
               
chr7:44942301-44942510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 29
               

               
Conread position:
               
88-450
               

               
Cow position:
               
chr7:46051498-46051876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
89-297
               

               
Cow position:
               
chr7:40335883-40336109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
91-359
               

               
Cow position:
               
chr7:23251706-23251426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
91-457
               

               
Cow position:
               
chr7:22651980-22651582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
56, 170
               

               
Conread position:
               
94-315
               

               
Cow position:
               
chr7:1463731-1463965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
94-364
               

               
Cow position:
               
chr7:5212624-5212331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr7:43055849-43055635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr7:23090273-23089947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
96-443
               

               
Cow position:
               
chr7:57660311-57659952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
97-457
               

               
Cow position:
               
chr7:29088310-29088674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
100-443
               

               
Cow position:
               
chr7:2579389-2579027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 298
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr7:34214455-34214763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
102-443
               

               
Cow position:
               
chr7:68315104-68315451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
108-361
               

               
Cow position:
               
chr7:34412411-34412136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 204
               

               
Conread position:
               
111-409
               

               
Cow position:
               
chr7:21122389-21122075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 233
               

               
Conread position:
               
111-409
               

               
Cow position:
               
chr7:58923266-58923582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr7:55085527-55085879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 240
               

               
Conread position:
               
116-457
               

               
Cow position:
               
chr7:43940381-43940713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
119-300
               

               
Cow position:
               
chr7:68909064-68909259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
119-457
               

               
Cow position:
               
chr7:23636582-23636935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 228
               

               
Conread position:
               
121-398
               

               
Cow position:
               
chr7:14524362-14524653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
121-425
               

               
Cow position:
               
chr7:34974197-34974507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
122-360
               

               
Cow position:
               
chr7:68516796-68516550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
122-447
               

               
Cow position:
               
chr7:5853242-5853582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
125-361
               

               
Cow position:
               
chr7:58351077-58350824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
137-457
               

               
Cow position:
               
chr7:13067056-13067385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 214
               

               
Conread position:
               
138-443
               

               
Cow position:
               
chr7:50900789-50900464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 206
               

               
Conread position:
               
138-455
               

               
Cow position:
               
chr7:32945972-32946289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
138-457
               

               
Cow position:
               
chr7:20051566-20051243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
142-325
               

               
Cow position:
               
chr7:51638665-51638466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr7:32910447-32910679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr7:51063193-51063520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
148-317
               

               
Cow position:
               
chr7:22938311-22938482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr7:12358173-12357957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
156-457
               

               
Cow position:
               
chr7:40308600-40308292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 217
               

               
Conread position:
               
159-457
               

               
Cow position:
               
chr7:36774285-36774628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
159-457
               

               
Cow position:
               
chr7:69132871-69133183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
163-442
               

               
Cow position:
               
chr7:29682525-29682240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 188
               

               
Conread position:
               
165-388
               

               
Cow position:
               
chr7:39823672-39823437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
165-408
               

               
Cow position:
               
chr7:57518007-57518259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
166-416
               

               
Cow position:
               
chr7:53606397-53606126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
166-456
               

               
Cow position:
               
chr7:2816197-2816504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr7:24460885-24461194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
168-367
               

               
Cow position:
               
chr7:63679005-63679220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
168-457
               

               
Cow position:
               
chr7:68857661-68857360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 184
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr7:52758407-52758612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
175-438
               

               
Cow position:
               
chr7:4811957-4812221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
180-452
               

               
Cow position:
               
chr7:65325806-65325534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
202-329
               

               
Cow position:
               
chr7:13218172-13218043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
202-363
               

               
Cow position:
               
chr7:18947776-18947602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
202-399
               

               
Cow position:
               
chr7:11549634-11549836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 167
               

               
Conread position:
               
202-414
               

               
Cow position:
               
chr7:25867519-25867306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr7:62953484-62953721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:168699-168433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 176
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:8089130-8089387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:29505082-29505337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:38429742-38429492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:39838910-39838638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 207
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:50566230-50565969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr7:54054557-54054822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
204-398
               

               
Cow position:
               
chr7:24928049-24927851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
204-457
               

               
Cow position:
               
chr7:9161696-9161445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
214-457
               

               
Cow position:
               
chr7:43084862-43085102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 106
               

               
Conread position:
               
215-448
               

               
Cow position:
               
chr7:25393285-25393514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr7:39947263-39947043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
221-446
               

               
Cow position:
               
chr7:23677916-23678140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
223-435
               

               
Cow position:
               
chr7:19414461-19414247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
232-443
               

               
Cow position:
               
chr7:58330826-58330617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
233-443
               

               
Cow position:
               
chr7:39800752-39800535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
245-457
               

               
Cow position:
               
chr7:53652999-53653220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr7:57066789-57066609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
250-402
               

               
Cow position:
               
chr7:48563452-48563301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
250-457
               

               
Cow position:
               
chr7:9861741-9861529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
250-457
               

               
Cow position:
               
chr7:11015704-11015924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
250-457
               

               
Cow position:
               
chr7:63300222-63300424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
116, 98
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr7:42431885-42432102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr7:51685039-51685240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr7:58800194-58800395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
266-457
               

               
Cow position:
               
chr7:59149546-59149738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
268-442
               

               
Cow position:
               
chr7:32549367-32549200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
269-457
               

               
Cow position:
               
chr7:51007047-51007235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
270-456
               

               
Cow position:
               
chr7:35754716-35754899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
271-457
               

               
Cow position:
               
chr7:5906677-5906860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
272-457
               

               
Cow position:
               
chr7:4060309-4060497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr7:54090540-54090712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
283-457
               

               
Cow position:
               
chr7:7476058-7475881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 48
               
Show alignments to all cow chromosomes.