Cow genome map

Conread name: Emb1-C0005191_I18

Conread position: 1-679
Cow position:
Alignm length: 710
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 245

Conread position: 1-679
Cow position:
Alignm length: 696
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 94

Conread position: 5-444
Cow position:
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 5-601
Cow position:
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 213

Conread position: 5-678
Cow position:
Alignm length: 685
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 23

Conread position: 5-679
Cow position:
Alignm length: 689
Alignm identity: 450
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 502, 20

Conread position: 20-679
Cow position:
Alignm length: 683
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 87

Conread position: 112-664
Cow position:
Alignm length: 569
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 29

Conread position: 125-679
Cow position:
Alignm length: 579
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 136-423
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 88

Conread position: 136-664
Cow position:
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 136-664
Cow position:
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 10

Conread position: 136-679
Cow position:
Alignm length: 563
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 136-679
Cow position:
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 97

Conread position: 138-679
Cow position:
Alignm length: 561
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 139-672
Cow position:
Alignm length: 550
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 13

Conread position: 140-664
Cow position:
Alignm length: 551
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 141-261
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 11

Conread position: 141-261
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 11

Conread position: 141-386
Cow position:
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-390
Cow position:
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-444
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-459
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 141-469
Cow position:
Alignm length: 335
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 60

Conread position: 141-475
Cow position:
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-595
Cow position:
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 141-597
Cow position:
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 84

Conread position: 141-600
Cow position:
Alignm length: 470
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-602
Cow position:
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-660
Cow position:
Alignm length: 538
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-664
Cow position:
Alignm length: 543
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-664
Cow position:
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-664
Cow position:
Alignm length: 541
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 88

Conread position: 141-664
Cow position:
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 13

Conread position: 141-664
Cow position:
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 141-664
Cow position:
Alignm length: 544
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-669
Cow position:
Alignm length: 549
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-672
Cow position:
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 141-674
Cow position:
Alignm length: 552
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-674
Cow position:
Alignm length: 549
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 56

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 554
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 141-679
Cow position:
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 560
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 22

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 21

Conread position: 141-679
Cow position:
Alignm length: 554
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 557
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 141-679
Cow position:
Alignm length: 555
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 554
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 555
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 141-679
Cow position:
Alignm length: 557
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 556
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 141-679
Cow position:
Alignm length: 558
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 141-679
Cow position:
Alignm length: 560
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 141-680
Cow position:
Alignm length: 559
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 142-360
Cow position:
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 10

Conread position: 142-664
Cow position:
Alignm length: 541
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 83

Conread position: 142-674
Cow position:
Alignm length: 550
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 142-679
Cow position:
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 83

Conread position: 142-679
Cow position:
Alignm length: 546
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 52

Conread position: 142-679
Cow position:
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 83

Conread position: 142-679
Cow position:
Alignm length: 559
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 83

Conread position: 149-679
Cow position:
Alignm length: 550
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 85

Conread position: 151-679
Cow position:
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 98

Conread position: 151-679
Cow position:
Alignm length: 551
Alignm identity: 365
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 81

Conread position: 151-679
Cow position:
Alignm length: 561
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 151-679
Cow position:
Alignm length: 545
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 153-390
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 154-679
Cow position:
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 155-679
Cow position:
Alignm length: 544
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 77

Conread position: 156-571
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 76

Conread position: 157-679
Cow position:
Alignm length: 537
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 157-679
Cow position:
Alignm length: 541
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 158-529
Cow position:
Alignm length: 379
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 147

Conread position: 158-675
Cow position:
Alignm length: 527
Alignm identity: 339
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 32, 67

Conread position: 159-665
Cow position:
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 172-679
Cow position:
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 176-679
Cow position:
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 214

Conread position: 179-679
Cow position:
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 192-679
Cow position:
Alignm length: 497
Alignm identity: 321
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 258, 36

Conread position: 207-601
Cow position:
Alignm length: 401
Alignm identity: 277
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 304, 30

Conread position: 216-679
Cow position:
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 183

Conread position: 246-674
Cow position:
Alignm length: 453
Alignm identity: 306
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 98

Conread position: 267-679
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 22

Conread position: 274-679
Cow position:
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 23

Conread position: 277-668
Cow position:
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 51

Conread position: 280-679
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 286-668
Cow position:
Alignm length: 399
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 160, 110

Conread position: 310-672
Cow position:
Alignm length: 374
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 48

Conread position: 318-597
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 78

Conread position: 322-679
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 124, 27

Conread position: 337-679
Cow position:
Alignm length: 355
Alignm identity: 241
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 174, 23

Conread position: 341-664
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 26

Conread position: 341-679
Cow position:
Alignm length: 360
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 359-602
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 37

Conread position: 361-582
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 35

Conread position: 366-668
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 378-664
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 66, 102

Conread position: 394-679
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 69

Conread position: 403-668
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 58

Conread position: 403-679
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 418-679
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 44

Conread position: 443-679
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 66

Conread position: 475-679
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 16

Conread position: 488-679
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.