Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-679 |
| Cow position: | chr1:5502260-5502963 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 245 |
| Conread position: | 1-679 |
| Cow position: | chr1:91892794-91892122 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 94 |
| Conread position: | 5-444 |
| Cow position: | chr1:31403168-31402745 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 116 |
| Conread position: | 5-601 |
| Cow position: | chr1:33712399-33713004 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 213 |
| Conread position: | 5-678 |
| Cow position: | chr1:17941454-17940802 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 23 |
| Conread position: | 5-679 |
| Cow position: | chr1:22905115-22905751 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 450 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 502, 20 |
| Conread position: | 20-679 |
| Cow position: | chr1:68607199-68606545 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 112-664 |
| Cow position: | chr1:9258912-9259460 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 125-679 |
| Cow position: | chr1:48246265-48246833 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 136-423 |
| Cow position: | chr1:9382114-9381823 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 136-664 |
| Cow position: | chr1:82912704-82912156 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 136-664 |
| Cow position: | chr1:85792121-85792660 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 136-679 |
| Cow position: | chr1:15026801-15027357 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 136-679 |
| Cow position: | chr1:72186439-72185885 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 138-679 |
| Cow position: | chr1:6194681-6195231 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 139-672 |
| Cow position: | chr1:67287271-67287810 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 140-664 |
| Cow position: | chr1:17012295-17011752 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 141-261 |
| Cow position: | chr1:72981718-72981838 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-261 |
| Cow position: | chr1:85780329-85780209 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-386 |
| Cow position: | chr1:58883617-58883373 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-390 |
| Cow position: | chr1:86698767-86698521 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-444 |
| Cow position: | chr1:69403431-69403732 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-459 |
| Cow position: | chr1:17036114-17035797 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-469 |
| Cow position: | chr1:60424912-60424587 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 141-475 |
| Cow position: | chr1:97226260-97225933 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-595 |
| Cow position: | chr1:34692671-34693104 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 141-597 |
| Cow position: | chr1:33851728-33852191 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 141-600 |
| Cow position: | chr1:79456522-79456061 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-602 |
| Cow position: | chr1:59209706-59209239 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-660 |
| Cow position: | chr1:89426018-89426550 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr1:44044227-44044764 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr1:53198994-53199519 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr1:60339747-60340281 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 141-664 |
| Cow position: | chr1:66999473-66999992 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 13 |
| Conread position: | 141-664 |
| Cow position: | chr1:69766907-69767436 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr1:71562128-71561591 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-669 |
| Cow position: | chr1:39544215-39544753 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-672 |
| Cow position: | chr1:29362741-29363283 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 141-674 |
| Cow position: | chr1:8825500-8826039 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-674 |
| Cow position: | chr1:76752202-76751658 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:3385570-3385028 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:11860792-11860256 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 56 |
| Conread position: | 141-679 |
| Cow position: | chr1:12061764-12061217 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:24651730-24652272 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:30534573-30534024 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:31397135-31397688 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-679 |
| Cow position: | chr1:33551375-33551923 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 141-679 |
| Cow position: | chr1:42736902-42737454 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:55777029-55777580 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 141-679 |
| Cow position: | chr1:56143887-56143340 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:58336286-58336834 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:62244195-62243647 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:65386777-65387316 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:69921987-69921438 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:72081228-72081763 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:73070605-73070062 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:76545090-76544539 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:82923728-82923191 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:88131222-88131770 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:93854972-93855513 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:94660123-94660671 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr1:99913868-99914422 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 141-680 |
| Cow position: | chr1:28873525-28874078 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 142-360 |
| Cow position: | chr1:85882444-85882663 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 142-664 |
| Cow position: | chr1:25179583-25179048 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-674 |
| Cow position: | chr1:26518435-26517896 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 142-679 |
| Cow position: | chr1:21999507-21998958 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-679 |
| Cow position: | chr1:31365639-31365101 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 52 |
| Conread position: | 142-679 |
| Cow position: | chr1:40574657-40575210 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 142-679 |
| Cow position: | chr1:63605329-63604777 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 149-679 |
| Cow position: | chr1:43570953-43570419 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 151-679 |
| Cow position: | chr1:22843099-22843637 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 151-679 |
| Cow position: | chr1:29609211-29608690 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 365 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 151-679 |
| Cow position: | chr1:52358819-52358262 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 151-679 |
| Cow position: | chr1:102434580-102434044 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 153-390 |
| Cow position: | chr1:57366667-57366430 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 154-679 |
| Cow position: | chr1:25550421-25550958 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 155-679 |
| Cow position: | chr1:49973728-49973191 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 156-571 |
| Cow position: | chr1:89481249-89481646 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 157-679 |
| Cow position: | chr1:23052253-23052759 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 157-679 |
| Cow position: | chr1:57568395-57568929 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 158-529 |
| Cow position: | chr1:85747036-85746668 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 147 |
| Conread position: | 158-675 |
| Cow position: | chr1:71741303-71740803 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 339 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 159-665 |
| Cow position: | chr1:55156539-55156019 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 172-679 |
| Cow position: | chr1:24443846-24443334 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 176-679 |
| Cow position: | chr1:76621205-76620687 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 214 |
| Conread position: | 179-679 |
| Cow position: | chr1:79110980-79111485 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 192-679 |
| Cow position: | chr1:88375271-88374808 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 258, 36 |
| Conread position: | 207-601 |
| Cow position: | chr1:58200974-58200601 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 304, 30 |
| Conread position: | 216-679 |
| Cow position: | chr1:57662539-57663021 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 183 |
| Conread position: | 246-674 |
| Cow position: | chr1:18139901-18139463 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 267-679 |
| Cow position: | chr1:85779878-85779450 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 274-679 |
| Cow position: | chr1:72984085-72984499 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 23 |
| Conread position: | 277-668 |
| Cow position: | chr1:72038970-72038584 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 51 |
| Conread position: | 280-679 |
| Cow position: | chr1:63502417-63502825 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 286-668 |
| Cow position: | chr1:98785300-98785689 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 160, 110 |
| Conread position: | 310-672 |
| Cow position: | chr1:18241898-18241530 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 318-597 |
| Cow position: | chr1:49495603-49495319 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 78 |
| Conread position: | 322-679 |
| Cow position: | chr1:98659278-98658911 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 337-679 |
| Cow position: | chr1:59647949-59648288 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 174, 23 |
| Conread position: | 341-664 |
| Cow position: | chr1:61309867-61310202 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 341-679 |
| Cow position: | chr1:27178825-27178466 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-602 |
| Cow position: | chr1:88269574-88269326 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 361-582 |
| Cow position: | chr1:58178298-58178076 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 366-668 |
| Cow position: | chr1:38416559-38416862 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 378-664 |
| Cow position: | chr1:30283020-30282719 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 394-679 |
| Cow position: | chr1:102781596-102781299 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 403-668 |
| Cow position: | chr1:57657593-57657871 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 403-679 |
| Cow position: | chr1:99019307-99019013 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 418-679 |
| Cow position: | chr1:31402738-31402467 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 443-679 |
| Cow position: | chr1:57697410-57697169 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 475-679 |
| Cow position: | chr1:74286012-74285793 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 488-679 |
| Cow position: | chr1:56193377-56193174 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.