Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-679 |
| Cow position: | chr14:48254372-48253711 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 53 |
| Conread position: | 2-261 |
| Cow position: | chr14:44130848-44131101 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 36-679 |
| Cow position: | chr14:45189803-45189179 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 64-591 |
| Cow position: | chr14:48704541-48705082 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 122-664 |
| Cow position: | chr14:12610475-12611035 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 188 |
| Conread position: | 140-675 |
| Cow position: | chr14:33237091-33237621 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 141-287 |
| Cow position: | chr14:29047855-29047709 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-298 |
| Cow position: | chr14:45917697-45917853 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-422 |
| Cow position: | chr14:38531684-38531412 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 141-437 |
| Cow position: | chr14:50138646-50138934 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-506 |
| Cow position: | chr14:50110622-50110987 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-507 |
| Cow position: | chr14:30735211-30734854 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-664 |
| Cow position: | chr14:9045614-9046160 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 141-664 |
| Cow position: | chr14:23257407-23257938 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-672 |
| Cow position: | chr14:16273250-16272703 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 141-679 |
| Cow position: | chr14:5529116-5529671 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:7472414-7472957 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:11154111-11153558 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:12743017-12742467 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:13779009-13779539 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:17001007-17000459 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:17685451-17685999 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 141-679 |
| Cow position: | chr14:20782511-20783059 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr14:32446847-32447393 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 141-679 |
| Cow position: | chr14:44377855-44378398 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 141-679 |
| Cow position: | chr14:48970730-48971278 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 142-446 |
| Cow position: | chr14:44686097-44686398 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-507 |
| Cow position: | chr14:29777450-29777083 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-663 |
| Cow position: | chr14:44226448-44226983 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 142-664 |
| Cow position: | chr14:30584906-30584371 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 142-669 |
| Cow position: | chr14:48825347-48825873 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 142-679 |
| Cow position: | chr14:19328216-19327667 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 142-679 |
| Cow position: | chr14:44287197-44286651 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 151-670 |
| Cow position: | chr14:15276170-15275641 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 151-679 |
| Cow position: | chr14:5511885-5512424 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 151-679 |
| Cow position: | chr14:13621082-13620551 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 151-679 |
| Cow position: | chr14:22031359-22030846 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 151-679 |
| Cow position: | chr14:44581425-44581952 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 154-678 |
| Cow position: | chr14:45206376-45206924 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 156-668 |
| Cow position: | chr14:45161165-45161680 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 160-663 |
| Cow position: | chr14:44551963-44552464 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 184-660 |
| Cow position: | chr14:27977448-27977942 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 191-679 |
| Cow position: | chr14:33401792-33402285 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 39 |
| Conread position: | 195-602 |
| Cow position: | chr14:23901392-23901803 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 33 |
| Conread position: | 206-679 |
| Cow position: | chr14:190081-190567 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 23 |
| Conread position: | 234-679 |
| Cow position: | chr14:12899246-12899695 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 77 |
| Conread position: | 240-672 |
| Cow position: | chr14:46392373-46391939 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 127 |
| Conread position: | 251-679 |
| Cow position: | chr14:16919551-16919117 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 52 |
| Conread position: | 252-679 |
| Cow position: | chr14:16343989-16343549 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 37 |
| Conread position: | 267-679 |
| Cow position: | chr14:17760690-17760280 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 58 |
| Conread position: | 275-679 |
| Cow position: | chr14:44288966-44288555 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 298-664 |
| Cow position: | chr14:38815494-38815121 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 211, 76 |
| Conread position: | 341-601 |
| Cow position: | chr14:2294523-2294787 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 359-679 |
| Cow position: | chr14:11561749-11561430 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 180, 37 |
| Conread position: | 391-674 |
| Cow position: | chr14:37224487-37224786 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 394-679 |
| Cow position: | chr14:35365951-35365658 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 128, 55 |
| Conread position: | 395-675 |
| Cow position: | chr14:46401088-46401376 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 50, 153 |
| Conread position: | 403-664 |
| Cow position: | chr14:40341364-40341636 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 407-679 |
| Cow position: | chr14:33488730-33489006 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 104 |
| Conread position: | 416-679 |
| Cow position: | chr14:9514936-9514683 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 440-679 |
| Cow position: | chr14:44689401-44689654 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 447-679 |
| Cow position: | chr14:33677416-33677663 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 523-679 |
| Cow position: | chr14:40169277-40169118 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 8 |
Show alignments to all cow chromosomes.