Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 53
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               36-679
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               64-591
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               122-664
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 188
               

               Conread position:
               140-675
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               141-287
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-298
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-422
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-437
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-506
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-507
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-672
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               142-446
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-507
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-663
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-669
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               151-670
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               154-678
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               156-668
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               160-663
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               184-660
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               191-679
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 39
               

               Conread position:
               195-602
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 33
               

               Conread position:
               206-679
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 23
               

               Conread position:
               234-679
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 77
               

               Conread position:
               240-672
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 127
               

               Conread position:
               251-679
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 52
               

               Conread position:
               252-679
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 37
               

               Conread position:
               267-679
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 58
               

               Conread position:
               275-679
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               298-664
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               211, 76
               

               Conread position:
               341-601
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               106, 55
               

               Conread position:
               359-679
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               180, 37
               

               Conread position:
               391-674
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               394-679
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               395-675
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               50, 153
               

               Conread position:
               403-664
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               407-679
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               416-679
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               440-679
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               447-679
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 148
               

               Conread position:
               523-679
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 8
               
Show alignments to all cow chromosomes.