Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               1-601
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               1-673
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               1-680
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 240
               

               Conread position:
               2-664
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 83
               

               Conread position:
               5-371
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               81, 38
               

               Conread position:
               5-396
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 116
               

               Conread position:
               17-674
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               45-679
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               48-670
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               126-668
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               133-644
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               135-664
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               136-485
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               136-602
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               136-664
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               139-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               140-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               141-280
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 92
               

               Conread position:
               141-287
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               141-300
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-348
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-396
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-471
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-663
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 92
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-669
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 92
               

               Conread position:
               142-669
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 53
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               143-344
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               146-668
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               156-591
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               156-601
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               156-668
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               156-679
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               158-601
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               159-601
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               159-680
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               163-667
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               346
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               167-602
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               196-679
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 32
               

               Conread position:
               219-670
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               223-601
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 144
               

               Conread position:
               223-671
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               247-679
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 117
               

               Conread position:
               270-679
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 126
               

               Conread position:
               273-602
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               276-679
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 120
               

               Conread position:
               279-669
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               322-602
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               322-679
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               125, 66
               

               Conread position:
               387-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 297
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               407-679
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               413-679
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               421-679
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               423-679
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               430-679
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 20
               
Show alignments to all cow chromosomes.