Cow genome map
Conread name: | Emb1-C0005191_I18 |
Conread position: | 1-323 |
Cow position: | chr15:32480953-32480647 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 233 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 85, 26 |
Conread position: | 1-601 |
Cow position: | chr15:328360-328926 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 96 |
Conread position: | 1-673 |
Cow position: | chr15:6156020-6155347 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 87 |
Conread position: | 1-680 |
Cow position: | chr15:6553923-6553224 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 240 |
Conread position: | 2-664 |
Cow position: | chr15:56415-57072 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 83 |
Conread position: | 5-371 |
Cow position: | chr15:24794299-24794639 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 259 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 81, 38 |
Conread position: | 5-396 |
Cow position: | chr15:17292376-17292753 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 116 |
Conread position: | 17-674 |
Cow position: | chr15:36626345-36625674 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 104 |
Conread position: | 45-679 |
Cow position: | chr15:5980334-5980950 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 76 |
Conread position: | 48-670 |
Cow position: | chr15:32693538-32694157 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 35 |
Conread position: | 126-668 |
Cow position: | chr15:8099515-8100061 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 107 |
Conread position: | 133-644 |
Cow position: | chr15:9429983-9430507 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 99 |
Conread position: | 135-664 |
Cow position: | chr15:17080163-17079623 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 99 |
Conread position: | 136-485 |
Cow position: | chr15:32673503-32673166 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 9 |
Conread position: | 136-602 |
Cow position: | chr15:30811047-30811490 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 19 |
Conread position: | 136-664 |
Cow position: | chr15:3009811-3009266 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 98 |
Conread position: | 139-679 |
Cow position: | chr15:13674577-13675104 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 140-679 |
Cow position: | chr15:444656-445207 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 14 |
Conread position: | 141-280 |
Cow position: | chr15:17218351-17218210 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 92 |
Conread position: | 141-287 |
Cow position: | chr15:42320371-42320226 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 59, 13 |
Conread position: | 141-300 |
Cow position: | chr15:51216644-51216800 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 130 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-348 |
Cow position: | chr15:7260685-7260882 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 13 |
Conread position: | 141-390 |
Cow position: | chr15:4385323-4385565 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 141-390 |
Cow position: | chr15:12421109-12420861 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 11 |
Conread position: | 141-396 |
Cow position: | chr15:35753541-35753282 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-471 |
Cow position: | chr15:42936764-42937092 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-602 |
Cow position: | chr15:36970974-36971433 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-663 |
Cow position: | chr15:4671486-4672020 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 92 |
Conread position: | 141-664 |
Cow position: | chr15:1519100-1518567 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-664 |
Cow position: | chr15:1772548-1773085 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-664 |
Cow position: | chr15:3888925-3889465 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 89 |
Conread position: | 141-664 |
Cow position: | chr15:18267937-18267400 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-679 |
Cow position: | chr15:315804-315257 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:524805-524257 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:2076703-2077260 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 7 |
Conread position: | 141-679 |
Cow position: | chr15:3261278-3260716 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 141-679 |
Cow position: | chr15:4922206-4922751 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 141-679 |
Cow position: | chr15:6471869-6471328 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-679 |
Cow position: | chr15:7837300-7837852 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:7934381-7934931 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 141-679 |
Cow position: | chr15:8750478-8751004 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 141-679 |
Cow position: | chr15:10888667-10889216 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 141-679 |
Cow position: | chr15:15347064-15346512 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr15:18332773-18332227 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:19737997-19737447 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:32494331-32493785 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr15:32720687-32720143 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 142-669 |
Cow position: | chr15:24295149-24295690 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 92 |
Conread position: | 142-669 |
Cow position: | chr15:31358941-31359469 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 142-679 |
Cow position: | chr15:1237737-1238280 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 53 |
Conread position: | 142-679 |
Cow position: | chr15:4651418-4651954 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 30 |
Conread position: | 142-679 |
Cow position: | chr15:14582301-14581758 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 89 |
Conread position: | 142-679 |
Cow position: | chr15:18576769-18577313 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 21 |
Conread position: | 142-679 |
Cow position: | chr15:21665691-21665144 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 143-344 |
Cow position: | chr15:4765263-4765464 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 157 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 48, 9 |
Conread position: | 146-668 |
Cow position: | chr15:7544940-7545454 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 34 |
Conread position: | 151-679 |
Cow position: | chr15:28490085-28489546 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 74 |
Conread position: | 151-679 |
Cow position: | chr15:35647603-35647066 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 81 |
Conread position: | 151-679 |
Cow position: | chr15:44828858-44829403 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 74 |
Conread position: | 151-679 |
Cow position: | chr15:53137158-53136618 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 31 |
Conread position: | 156-591 |
Cow position: | chr15:1764158-1764592 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 70 |
Conread position: | 156-601 |
Cow position: | chr15:7894167-7893725 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 156-668 |
Cow position: | chr15:4812671-4813190 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 68 |
Conread position: | 156-672 |
Cow position: | chr15:4961710-4962229 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 67 |
Conread position: | 156-679 |
Cow position: | chr15:44069989-44070530 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 158-601 |
Cow position: | chr15:24717162-24717602 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 12 |
Conread position: | 159-601 |
Cow position: | chr15:37392562-37393008 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 65 |
Conread position: | 159-680 |
Cow position: | chr15:4685669-4686201 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 19 |
Conread position: | 163-667 |
Cow position: | chr15:2762755-2763256 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 346 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 29, 70 |
Conread position: | 167-602 |
Cow position: | chr15:6078827-6079269 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 66 |
Conread position: | 196-679 |
Cow position: | chr15:1782329-1782825 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 32 |
Conread position: | 219-670 |
Cow position: | chr15:1667840-1668318 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 11 |
Conread position: | 223-601 |
Cow position: | chr15:31862421-31862047 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 144 |
Conread position: | 223-671 |
Cow position: | chr15:47772281-47772741 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 298 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 47, 38 |
Conread position: | 247-679 |
Cow position: | chr15:17218103-17217657 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 117 |
Conread position: | 270-679 |
Cow position: | chr15:9003940-9003520 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 126 |
Conread position: | 273-602 |
Cow position: | chr15:2589317-2588973 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 213 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 15, 86 |
Conread position: | 276-679 |
Cow position: | chr15:8811833-8811422 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 120 |
Conread position: | 279-669 |
Cow position: | chr15:6592436-6592026 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 113 |
Conread position: | 322-602 |
Cow position: | chr15:7260834-7261113 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 199 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 122, 17 |
Conread position: | 322-679 |
Cow position: | chr15:9912920-9913295 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 265 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 125, 66 |
Conread position: | 387-679 |
Cow position: | chr15:2214605-2214292 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 221 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 59, 297 |
Conread position: | 391-679 |
Cow position: | chr15:4386058-4386362 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 403-679 |
Cow position: | chr15:35753005-35752716 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 214 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 44, 66 |
Conread position: | 407-679 |
Cow position: | chr15:51217918-51218206 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 214 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 413-679 |
Cow position: | chr15:2016890-2017171 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 198 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 33, 43 |
Conread position: | 421-679 |
Cow position: | chr15:1300476-1300204 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 189 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 24, 90 |
Conread position: | 423-679 |
Cow position: | chr15:36668069-36668349 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 189 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 430-679 |
Cow position: | chr15:6368617-6368356 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 175 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 7, 20 |
Show alignments to all cow chromosomes.