Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               3-675
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 60
               

               Conread position:
               5-679
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 234
               

               Conread position:
               10-390
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               25-390
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               29-390
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               127-669
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               141-428
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               141-485
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-600
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-654
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-429
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-429
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-663
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-666
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 257
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-678
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               151-384
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               151-644
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               154-679
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               156-507
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               156-635
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               169-655
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               170-679
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               186-668
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 35
               

               Conread position:
               285-679
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 24
               

               Conread position:
               334-679
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               385-668
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               412-664
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               416-664
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               418-679
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               421-679
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               422-600
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               427-674
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               428-679
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 251
               

               Conread position:
               443-669
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 7
               
Show alignments to all cow chromosomes.