Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               5-664
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 90
               

               Conread position:
               17-672
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 86
               

               Conread position:
               135-679
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               136-332
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               136-579
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               136-664
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               140-602
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               141-288
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-395
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               141-660
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 21
               

               Conread position:
               141-663
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               141-671
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-672
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-672
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-281
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               142-668
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 55
               

               Conread position:
               143-679
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               154-679
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               156-679
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               191-674
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               227, 30
               

               Conread position:
               201-664
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 27
               

               Conread position:
               223-602
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 78
               

               Conread position:
               236-602
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 140
               

               Conread position:
               246-672
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               156, 56
               

               Conread position:
               255-602
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 69
               

               Conread position:
               277-679
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 119
               

               Conread position:
               283-601
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               167, 84
               

               Conread position:
               313-585
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               166, 83
               

               Conread position:
               313-664
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 44
               

               Conread position:
               337-679
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               422-603
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               443-679
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 71
               
Show alignments to all cow chromosomes.