Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-665 |
| Cow position: | chr18:29073396-29074021 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 431 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 504, 40 |
| Conread position: | 1-679 |
| Cow position: | chr18:28973530-28972844 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 118 |
| Conread position: | 3-674 |
| Cow position: | chr18:30849304-30848636 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 436 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 140-663 |
| Cow position: | chr18:33269317-33269845 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 141-390 |
| Cow position: | chr18:37505555-37505801 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-601 |
| Cow position: | chr18:33336359-33336829 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 141-664 |
| Cow position: | chr18:11274618-11274081 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr18:33953087-33952556 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr18:51342174-51342710 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 141-664 |
| Cow position: | chr18:55088433-55087900 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-674 |
| Cow position: | chr18:36508827-36509377 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr18:14130885-14131433 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr18:32652693-32653257 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 255 |
| Conread position: | 141-679 |
| Cow position: | chr18:40478877-40479428 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr18:41840330-41839762 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr18:51462592-51462049 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-679 |
| Cow position: | chr18:52651412-52651952 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr18:54023631-54023094 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 11 |
| Conread position: | 142-452 |
| Cow position: | chr18:27987557-27987871 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-679 |
| Cow position: | chr18:14416471-14417025 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 142-679 |
| Cow position: | chr18:16088641-16089180 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 142-679 |
| Cow position: | chr18:16176123-16175576 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 142-679 |
| Cow position: | chr18:23798139-23798689 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 142-679 |
| Cow position: | chr18:27837823-27837270 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-679 |
| Cow position: | chr18:54171044-54170496 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 151-678 |
| Cow position: | chr18:54271010-54271534 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 154-679 |
| Cow position: | chr18:25351254-25351796 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 162-679 |
| Cow position: | chr18:25363733-25364245 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 170-675 |
| Cow position: | chr18:19406028-19405530 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 171-663 |
| Cow position: | chr18:16079187-16079691 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 325-607 |
| Cow position: | chr18:40725984-40725698 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 121, 42 |
| Conread position: | 389-674 |
| Cow position: | chr18:51481622-51481919 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 391-679 |
| Cow position: | chr18:37506697-37507001 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 414-675 |
| Cow position: | chr18:32768418-32768694 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 471-679 |
| Cow position: | chr18:27988008-27988231 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.