Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 25-679 |
| Cow position: | chr19:4386012-4386665 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 96 |
| Conread position: | 130-678 |
| Cow position: | chr19:39698931-39699503 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 381 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 133-347 |
| Cow position: | chr19:189904-190119 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 136-567 |
| Cow position: | chr19:172696-173133 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 141-558 |
| Cow position: | chr19:204455-204876 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-567 |
| Cow position: | chr19:5729328-5729752 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-569 |
| Cow position: | chr19:20105203-20105635 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-600 |
| Cow position: | chr19:893109-892647 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-664 |
| Cow position: | chr19:773088-773627 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr19:5901003-5900473 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-668 |
| Cow position: | chr19:3138435-3138963 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 141-673 |
| Cow position: | chr19:438943-438400 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-674 |
| Cow position: | chr19:40851939-40851410 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 141-679 |
| Cow position: | chr19:341718-342263 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:2273887-2273341 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:12773612-12774159 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:28581162-28580617 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:32203642-32204188 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 141-679 |
| Cow position: | chr19:33873925-33874470 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:33942100-33942651 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:39391007-39391553 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 141-679 |
| Cow position: | chr19:40887249-40886700 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 142-558 |
| Cow position: | chr19:7488809-7489229 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-664 |
| Cow position: | chr19:32211582-32211046 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 142-674 |
| Cow position: | chr19:39185046-39184499 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 156-474 |
| Cow position: | chr19:55927514-55927209 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 159-679 |
| Cow position: | chr19:32182566-32182036 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 30 |
| Conread position: | 172-680 |
| Cow position: | chr19:5653165-5652678 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 191-679 |
| Cow position: | chr19:7069879-7070353 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 195-668 |
| Cow position: | chr19:28406155-28405674 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 35 |
| Conread position: | 286-601 |
| Cow position: | chr19:347682-347370 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 239, 42 |
| Conread position: | 338-601 |
| Cow position: | chr19:40816878-40816612 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 340-664 |
| Cow position: | chr19:32193705-32194043 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 359-597 |
| Cow position: | chr19:39002348-39002105 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 392-601 |
| Cow position: | chr19:190116-190334 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 394-679 |
| Cow position: | chr19:9707386-9707089 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 183 |
| Conread position: | 447-664 |
| Cow position: | chr19:6548805-6549037 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.