Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 54
               

               Conread position:
               5-669
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               36-679
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 48
               

               Conread position:
               45-674
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               67-679
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               129-600
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               134-679
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               141-316
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-429
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-595
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-601
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               141-662
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-680
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               142-354
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-668
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               142-672
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               148-390
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 77
               

               Conread position:
               148-679
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               151-503
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               214, 38
               

               Conread position:
               151-669
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               151-680
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               360
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               152-679
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               156-278
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               156-668
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 154
               

               Conread position:
               157-679
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               157-679
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               158-677
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               159-679
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               186-663
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               195-664
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 35
               

               Conread position:
               195-679
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 33
               

               Conread position:
               204-667
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 107
               

               Conread position:
               212-602
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               330, 43
               

               Conread position:
               213-668
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 17
               

               Conread position:
               223-679
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 173
               

               Conread position:
               225-602
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               219, 82
               

               Conread position:
               250-674
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 9
               

               Conread position:
               267-675
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 58
               

               Conread position:
               290-679
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               157, 12
               

               Conread position:
               298-679
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 70
               

               Conread position:
               326-601
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               330-679
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               337-679
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               381-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               385-679
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               400-664
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               403-667
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               420-665
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               422-679
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               433-668
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               436-668
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               469-679
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 0
               
Show alignments to all cow chromosomes.