Cow genome map
Conread name: | Emb1-C0005191_I18 |
Conread position: | 1-286 |
Cow position: | chr2:81256623-81256893 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 85, 120 |
Conread position: | 1-679 |
Cow position: | chr2:12224495-12223827 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 54 |
Conread position: | 5-669 |
Cow position: | chr2:5485154-5484518 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 62 |
Conread position: | 36-679 |
Cow position: | chr2:38373264-38373870 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 48 |
Conread position: | 45-674 |
Cow position: | chr2:3835112-3834481 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 72 |
Conread position: | 67-679 |
Cow position: | chr2:66308245-66307623 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 75 |
Conread position: | 129-600 |
Cow position: | chr2:50323134-50323587 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 20 |
Conread position: | 134-679 |
Cow position: | chr2:11729793-11730313 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 91 |
Conread position: | 141-316 |
Cow position: | chr2:44091235-44091410 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 134 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 53, 13 |
Conread position: | 141-429 |
Cow position: | chr2:42671052-42670769 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 11 |
Conread position: | 141-595 |
Cow position: | chr2:28620090-28619638 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 141-601 |
Cow position: | chr2:14777886-14777443 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 91 |
Conread position: | 141-662 |
Cow position: | chr2:41172605-41173136 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 141-664 |
Cow position: | chr2:2412862-2412326 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-664 |
Cow position: | chr2:14823056-14823563 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 22 |
Conread position: | 141-664 |
Cow position: | chr2:57335130-57335667 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-664 |
Cow position: | chr2:59413747-59413214 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-668 |
Cow position: | chr2:31297731-31298258 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 141-674 |
Cow position: | chr2:36980315-36980861 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:282752-282204 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:8118477-8119027 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:10186294-10185740 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 141-679 |
Cow position: | chr2:10268719-10268172 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:10732830-10732287 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 141-679 |
Cow position: | chr2:11159186-11158633 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:16900190-16900738 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:19011281-19011831 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:41657117-41657661 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 303, 11 |
Conread position: | 141-679 |
Cow position: | chr2:65938511-65937967 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr2:80293013-80292475 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-680 |
Cow position: | chr2:22077718-22078269 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 142-354 |
Cow position: | chr2:39421512-39421725 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 52, 80 |
Conread position: | 142-664 |
Cow position: | chr2:9907846-9908384 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 83 |
Conread position: | 142-668 |
Cow position: | chr2:49604873-49605417 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 91 |
Conread position: | 142-672 |
Cow position: | chr2:47038479-47037943 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 12 |
Conread position: | 142-679 |
Cow position: | chr2:13045766-13045228 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 142-679 |
Cow position: | chr2:28793192-28793736 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 82 |
Conread position: | 142-679 |
Cow position: | chr2:44991357-44990818 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 94 |
Conread position: | 142-679 |
Cow position: | chr2:53329694-53330247 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 91 |
Conread position: | 148-390 |
Cow position: | chr2:28650288-28650043 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 186 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 44, 77 |
Conread position: | 148-679 |
Cow position: | chr2:32066139-32065595 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 84 |
Conread position: | 151-503 |
Cow position: | chr2:53498406-53498059 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 257 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 214, 38 |
Conread position: | 151-669 |
Cow position: | chr2:24146807-24147341 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 81 |
Conread position: | 151-680 |
Cow position: | chr2:81751164-81750632 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 360 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 41, 28 |
Conread position: | 152-679 |
Cow position: | chr2:34051121-34051653 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 50 |
Conread position: | 156-278 |
Cow position: | chr2:50983276-50983152 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 105 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 36, 69 |
Conread position: | 156-668 |
Cow position: | chr2:7902968-7903512 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 154 |
Conread position: | 157-679 |
Cow position: | chr2:50077552-50078085 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 75 |
Conread position: | 157-679 |
Cow position: | chr2:74857183-74857707 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 14 |
Conread position: | 158-677 |
Cow position: | chr2:69139883-69140414 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 341 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 37, 11 |
Conread position: | 159-679 |
Cow position: | chr2:36053044-36052523 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 72 |
Conread position: | 186-663 |
Cow position: | chr2:1690955-1691445 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 47 |
Conread position: | 195-664 |
Cow position: | chr2:41150615-41151073 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 35 |
Conread position: | 195-679 |
Cow position: | chr2:15576843-15576356 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 33 |
Conread position: | 204-667 |
Cow position: | chr2:47810845-47811318 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 107 |
Conread position: | 212-602 |
Cow position: | chr2:767442-767080 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 269 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 330, 43 |
Conread position: | 213-668 |
Cow position: | chr2:51617270-51617723 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 17 |
Conread position: | 223-679 |
Cow position: | chr2:365043-364573 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 173 |
Conread position: | 225-602 |
Cow position: | chr2:573616-573973 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 264 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 219, 82 |
Conread position: | 250-674 |
Cow position: | chr2:12480023-12479593 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 9 |
Conread position: | 267-675 |
Cow position: | chr2:1113307-1113721 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 58 |
Conread position: | 290-679 |
Cow position: | chr2:43960792-43961179 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 288 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 157, 12 |
Conread position: | 298-679 |
Cow position: | chr2:6961618-6962002 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 70 |
Conread position: | 326-601 |
Cow position: | chr2:32655788-32656068 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 201 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 125, 67 |
Conread position: | 330-679 |
Cow position: | chr2:5862590-5862222 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 252 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 37, 19 |
Conread position: | 337-679 |
Cow position: | chr2:1109783-1109440 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 234 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 108, 65 |
Conread position: | 381-679 |
Cow position: | chr2:52062717-52063030 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 193 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 67, 55 |
Conread position: | 385-679 |
Cow position: | chr2:50983117-50982813 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 221 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 61, 77 |
Conread position: | 391-679 |
Cow position: | chr2:28649416-28649113 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 56, 165 |
Conread position: | 400-664 |
Cow position: | chr2:2356250-2355970 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 196 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 403-667 |
Cow position: | chr2:78762847-78763125 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 199 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 44, 98 |
Conread position: | 403-679 |
Cow position: | chr2:24924756-24925048 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 208 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 420-665 |
Cow position: | chr2:20902139-20901874 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 187 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 422-679 |
Cow position: | chr2:42670493-42670220 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 433-668 |
Cow position: | chr2:45964893-45964642 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 173 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 436-668 |
Cow position: | chr2:5904092-5903844 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 177 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 469-679 |
Cow position: | chr2:81257434-81257657 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.