Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-674
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 27
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               140-655
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               141-287
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-422
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-454
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-601
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 13
               

               Conread position:
               141-665
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 81
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               149-665
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               151-664
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               156-651
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               157-678
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               164-601
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               168-601
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               191-663
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               201-601
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               201-668
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 27
               

               Conread position:
               207-679
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 22
               

               Conread position:
               278-662
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 118
               

               Conread position:
               291-668
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 105
               

               Conread position:
               333-679
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               355-679
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               378-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               385-668
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               390-668
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 198
               

               Conread position:
               391-640
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               403-672
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 88
               

               Conread position:
               433-604
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               455-674
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.