Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-654 |
| Cow position: | chr22:2395753-2395073 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 93 |
| Conread position: | 1-674 |
| Cow position: | chr22:11032032-11032687 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 9 |
| Conread position: | 1-679 |
| Cow position: | chr22:21589604-21590283 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 2-664 |
| Cow position: | chr22:537374-538031 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 3-279 |
| Cow position: | chr22:1322403-1322661 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 112 |
| Conread position: | 5-343 |
| Cow position: | chr22:1269510-1269194 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 78, 90 |
| Conread position: | 6-607 |
| Cow position: | chr22:3306119-3305547 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 136-668 |
| Cow position: | chr22:326779-326235 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 95 |
| Conread position: | 136-679 |
| Cow position: | chr22:20240458-20239896 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 140-679 |
| Cow position: | chr22:39469122-39468575 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 141-327 |
| Cow position: | chr22:37132821-37133007 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-330 |
| Cow position: | chr22:525295-525104 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 141-444 |
| Cow position: | chr22:17328338-17328037 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-590 |
| Cow position: | chr22:44369231-44368779 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-660 |
| Cow position: | chr22:10909440-10908910 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr22:5232887-5232361 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr22:14629812-14630349 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr22:18027674-18028212 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr22:27309382-27308845 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr22:35671961-35671424 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-672 |
| Cow position: | chr22:3277961-3277421 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-679 |
| Cow position: | chr22:560303-559765 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr22:19143290-19142744 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr22:31334636-31334090 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr22:34168732-34169284 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr22:36861132-36860590 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr22:44934378-44934915 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 142-461 |
| Cow position: | chr22:48004936-48005253 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 142-593 |
| Cow position: | chr22:5940891-5940459 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 142-621 |
| Cow position: | chr22:35906994-35906537 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-664 |
| Cow position: | chr22:694017-694551 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 142-664 |
| Cow position: | chr22:24950490-24951028 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 142-679 |
| Cow position: | chr22:12731275-12730738 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 142-679 |
| Cow position: | chr22:15313555-15313006 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 142-679 |
| Cow position: | chr22:18815985-18815435 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 142-679 |
| Cow position: | chr22:31313740-31314292 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 142-679 |
| Cow position: | chr22:36184150-36184704 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 151-390 |
| Cow position: | chr22:46630639-46630399 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 151-679 |
| Cow position: | chr22:1520605-1520078 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 151-679 |
| Cow position: | chr22:44396852-44397391 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 164-674 |
| Cow position: | chr22:37072663-37072144 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 183 |
| Conread position: | 181-674 |
| Cow position: | chr22:44457488-44457994 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 227-679 |
| Cow position: | chr22:45930163-45930619 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 100 |
| Conread position: | 240-677 |
| Cow position: | chr22:38175600-38176039 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 168, 88 |
| Conread position: | 257-679 |
| Cow position: | chr22:41239886-41240320 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 321-679 |
| Cow position: | chr22:522819-522449 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 127, 28 |
| Conread position: | 403-679 |
| Cow position: | chr22:37293016-37292720 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 403-679 |
| Cow position: | chr22:44351008-44350717 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 421-666 |
| Cow position: | chr22:28659690-28659428 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 429-651 |
| Cow position: | chr22:284332-284103 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 439-678 |
| Cow position: | chr22:17327765-17327510 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 487-668 |
| Cow position: | chr22:1281984-1281796 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 31 |
Show alignments to all cow chromosomes.