Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 100
               

               Conread position:
               5-668
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               135-668
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               141-242
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-278
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-294
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-385
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-389
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               141-411
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-424
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               141-428
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-429
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-488
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               141-539
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-600
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-600
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-669
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-296
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               142-439
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               142-598
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-600
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 48
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               151-329
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               195-675
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 34
               

               Conread position:
               209-609
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 12
               

               Conread position:
               216-679
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 13
               

               Conread position:
               281-679
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               321-679
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               322-664
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               328-679
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               334-679
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 62
               

               Conread position:
               396-662
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               404-665
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               102, 86
               

               Conread position:
               404-679
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               410-679
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               101, 71
               

               Conread position:
               412-679
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               422-679
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               440-679
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.