Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-472 |
| Cow position: | chr23:967070-966614 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 100 |
| Conread position: | 5-668 |
| Cow position: | chr23:14974280-14973630 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 135-668 |
| Cow position: | chr23:4510468-4510992 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 136-679 |
| Cow position: | chr23:2312853-2312296 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 141-242 |
| Cow position: | chr23:15526013-15526115 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-278 |
| Cow position: | chr23:22146852-22146715 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-294 |
| Cow position: | chr23:25683639-25683486 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-385 |
| Cow position: | chr23:14965350-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-389 |
| Cow position: | chr23:4752994-4753240 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 97 |
| Conread position: | 141-390 |
| Cow position: | chr23:31649547-31649305 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 141-411 |
| Cow position: | chr23:20302606-20302864 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-424 |
| Cow position: | chr23:16616444-16616164 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 141-428 |
| Cow position: | chr23:1024624-1024331 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-429 |
| Cow position: | chr23:2757996-2758282 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-488 |
| Cow position: | chr23:5874245-5873913 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 11 |
| Conread position: | 141-539 |
| Cow position: | chr23:28077768-28078161 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-600 |
| Cow position: | chr23:27970935-27971398 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 141-600 |
| Cow position: | chr23:28025064-28025527 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-602 |
| Cow position: | chr23:19950192-19949740 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-602 |
| Cow position: | chr23:23830355-23830821 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr23:4360224-4360738 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 13 |
| Conread position: | 141-664 |
| Cow position: | chr23:28217685-28218215 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-669 |
| Cow position: | chr23:20155814-20155283 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-674 |
| Cow position: | chr23:36030976-36030437 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:2716790-2717336 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:2794835-2794311 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 141-679 |
| Cow position: | chr23:4640228-4639679 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:15219502-15218957 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:19489943-19490481 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:27399901-27400453 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-679 |
| Cow position: | chr23:28913794-28914340 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 142-296 |
| Cow position: | chr23:31594850-31594695 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 142-439 |
| Cow position: | chr23:3014794-3015090 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 142-598 |
| Cow position: | chr23:28108056-28108507 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-600 |
| Cow position: | chr23:28368126-28367665 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-674 |
| Cow position: | chr23:4889073-4889624 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 142-679 |
| Cow position: | chr23:4817416-4817966 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 142-679 |
| Cow position: | chr23:15177471-15178018 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 151-329 |
| Cow position: | chr23:29451913-29451734 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 195-675 |
| Cow position: | chr23:3880625-3880140 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 34 |
| Conread position: | 209-609 |
| Cow position: | chr23:3706586-3706990 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 12 |
| Conread position: | 216-679 |
| Cow position: | chr23:2026610-2026136 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 13 |
| Conread position: | 281-679 |
| Cow position: | chr23:11077676-11077263 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 321-679 |
| Cow position: | chr23:11779361-11779729 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 67 |
| Conread position: | 322-664 |
| Cow position: | chr23:29451764-29451410 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 328-679 |
| Cow position: | chr23:22146714-22146355 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 334-679 |
| Cow position: | chr23:15526155-15526514 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 62 |
| Conread position: | 396-662 |
| Cow position: | chr23:7336768-7337050 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 404-665 |
| Cow position: | chr23:14778505-14778235 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 102, 86 |
| Conread position: | 404-679 |
| Cow position: | chr23:22943683-22943408 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 170 |
| Conread position: | 410-679 |
| Cow position: | chr23:16498566-16498286 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 412-679 |
| Cow position: | chr23:19450777-19451057 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 422-679 |
| Cow position: | chr23:2758565-2758833 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 440-679 |
| Cow position: | chr23:2341766-2342022 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.