Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-679 |
| Cow position: | chr24:148253-147578 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 120 |
| Conread position: | 1-679 |
| Cow position: | chr24:33933731-33934404 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 2-679 |
| Cow position: | chr24:38637905-38638570 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 10-554 |
| Cow position: | chr24:12237605-12238133 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 13-664 |
| Cow position: | chr24:5992858-5992211 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 94 |
| Conread position: | 46-601 |
| Cow position: | chr24:14301871-14302425 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 52-679 |
| Cow position: | chr24:6059291-6059928 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 137-668 |
| Cow position: | chr24:12110215-12109685 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 17 |
| Conread position: | 141-602 |
| Cow position: | chr24:6084552-6085014 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-602 |
| Cow position: | chr24:44018014-44018479 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-663 |
| Cow position: | chr24:6024624-6024092 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-664 |
| Cow position: | chr24:9188250-9187716 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 13 |
| Conread position: | 141-664 |
| Cow position: | chr24:13188654-13189188 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-664 |
| Cow position: | chr24:23505381-23504848 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 141-679 |
| Cow position: | chr24:4415042-4414501 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 11 |
| Conread position: | 141-679 |
| Cow position: | chr24:12335288-12334727 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr24:19833873-19834426 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr24:22971574-22972122 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr24:29187771-29188322 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 142-389 |
| Cow position: | chr24:12130489-12130245 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 91 |
| Conread position: | 142-673 |
| Cow position: | chr24:17696491-17695957 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 142-674 |
| Cow position: | chr24:12086686-12087229 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 142-676 |
| Cow position: | chr24:6660015-6659466 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 147-664 |
| Cow position: | chr24:19701990-19702501 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 151-589 |
| Cow position: | chr24:6669654-6669216 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 151-664 |
| Cow position: | chr24:12484829-12484301 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 154-679 |
| Cow position: | chr24:9544555-9545093 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 231-664 |
| Cow position: | chr24:8030860-8031307 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 166 |
| Conread position: | 282-679 |
| Cow position: | chr24:12162544-12162942 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 229, 29 |
| Conread position: | 283-679 |
| Cow position: | chr24:7090343-7089937 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 31 |
| Conread position: | 314-669 |
| Cow position: | chr24:14383933-14383571 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 21 |
| Conread position: | 319-664 |
| Cow position: | chr24:13232910-13233268 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 160 |
| Conread position: | 388-676 |
| Cow position: | chr24:37200282-37199984 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 390-679 |
| Cow position: | chr24:6406756-6407061 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 393-679 |
| Cow position: | chr24:14871581-14871283 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 403-601 |
| Cow position: | chr24:6337124-6337330 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 403-672 |
| Cow position: | chr24:12129325-12129043 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 406-602 |
| Cow position: | chr24:6332954-6332749 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 414-674 |
| Cow position: | chr24:40193268-40193539 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 443-664 |
| Cow position: | chr24:6328250-6328015 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 6 |
Show alignments to all cow chromosomes.