Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-674
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 42
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 120
               

               Conread position:
               2-679
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               29-346
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               141-284
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               141-307
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-336
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               141-362
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               141-373
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-445
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-656
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               368
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               142-299
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               151-423
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               151-661
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               153-507
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               154-679
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               156-657
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 38
               

               Conread position:
               158-483
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               161-679
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               163-679
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               169-679
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               188-674
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               263-679
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 122
               

               Conread position:
               298-664
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               313-668
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               318-582
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               322-679
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               333-679
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               391-599
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               416-672
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               433-675
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               472-679
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               522-679
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               
Show alignments to all cow chromosomes.