Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-672
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               1-678
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               13-660
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 85
               

               Conread position:
               28-678
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               35-576
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               135-664
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 92
               

               Conread position:
               136-655
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               136-672
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               137-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 87
               

               Conread position:
               140-679
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               140-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               141-261
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-307
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               141-338
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-444
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-463
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               141-506
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-635
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-660
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               141-662
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               141-675
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               142-287
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               142-394
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 111
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               372, 52
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               146-429
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               149-665
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               151-673
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               153-679
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               154-668
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               154-678
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               155-668
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               157-674
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               158-481
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               159-601
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 160
               

               Conread position:
               159-680
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               182-679
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               201-679
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 156
               

               Conread position:
               204-680
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 25
               

               Conread position:
               267-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 110
               

               Conread position:
               284-679
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               298-678
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 95
               

               Conread position:
               315-675
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               322-679
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               331-600
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 57
               

               Conread position:
               385-679
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               394-679
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               53, 128
               

               Conread position:
               403-664
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               415-679
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 28
               

               Conread position:
               439-678
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 240
               

               Conread position:
               443-664
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               461-673
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               490-679
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.