Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 24
               

               Conread position:
               2-664
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 158
               

               Conread position:
               16-679
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               134-413
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               137-259
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-423
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               141-472
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 92
               

               Conread position:
               141-505
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-638
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-667
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-673
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-675
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               346
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-669
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               142-680
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               149-668
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               151-664
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 248
               

               Conread position:
               153-679
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               364
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               154-679
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 71
               

               Conread position:
               156-494
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               156-664
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               156-679
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               159-679
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               159-679
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               195-673
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 33
               

               Conread position:
               207-601
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               241, 21
               

               Conread position:
               254-601
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               268-597
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 9
               

               Conread position:
               269-679
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 127
               

               Conread position:
               313-674
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               316-679
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               252, 77
               

               Conread position:
               359-679
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               388-605
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               405-675
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               41, 140
               

               Conread position:
               418-679
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               422-679
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               424-679
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               436-597
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               436-679
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               443-679
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               451-679
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.