Cow genome map
| Conread name: | Emb1-C0005191_I18 | 
| Conread position: | 1-600 | 
| Cow position: | chr6:28275225-28275806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 609 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 103 | 
| Conread position: | 2-323 | 
| Cow position: | chr6:26044763-26045096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 10, 233 | 
| Conread position: | 5-332 | 
| Cow position: | chr6:2887420-2887742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 185, 134 | 
| Conread position: | 5-644 | 
| Cow position: | chr6:38900918-38900293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 89 | 
| Conread position: | 14-664 | 
| Cow position: | chr6:13847280-13847927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 81 | 
| Conread position: | 36-602 | 
| Cow position: | chr6:66541914-66542483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 68 | 
| Conread position: | 42-673 | 
| Cow position: | chr6:43793427-43792808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 62 | 
| Conread position: | 125-373 | 
| Cow position: | chr6:10500648-10500896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 67, 27 | 
| Conread position: | 130-679 | 
| Cow position: | chr6:40554243-40553661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 388 | 
| Conread position: | 133-673 | 
| Cow position: | chr6:69143007-69143534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 120, 55 | 
| Conread position: | 136-366 | 
| Cow position: | chr6:58027113-58027343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 9 | 
| Conread position: | 136-390 | 
| Cow position: | chr6:15280195-15279943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 90 | 
| Conread position: | 136-679 | 
| Cow position: | chr6:3488063-3487508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 97 | 
| Conread position: | 136-679 | 
| Cow position: | chr6:15140823-15140262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 97 | 
| Conread position: | 140-454 | 
| Cow position: | chr6:29311861-29312174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 12 | 
| Conread position: | 141-287 | 
| Cow position: | chr6:65881276-65881422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-326 | 
| Cow position: | chr6:8202107-8202292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-334 | 
| Cow position: | chr6:55543955-55543762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-386 | 
| Cow position: | chr6:40867191-40866951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-390 | 
| Cow position: | chr6:3277582-3277343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-390 | 
| Cow position: | chr6:39437917-39438159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-409 | 
| Cow position: | chr6:30274808-30274547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 13 | 
| Conread position: | 141-445 | 
| Cow position: | chr6:36526419-36526718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-486 | 
| Cow position: | chr6:34892635-34892291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 11 | 
| Conread position: | 141-555 | 
| Cow position: | chr6:39908891-39909307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 13 | 
| Conread position: | 141-557 | 
| Cow position: | chr6:65841956-65842369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-601 | 
| Cow position: | chr6:66232182-66232642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 23 | 
| Conread position: | 141-635 | 
| Cow position: | chr6:11724741-11724238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 14 | 
| Conread position: | 141-649 | 
| Cow position: | chr6:3889114-3888610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-663 | 
| Cow position: | chr6:13104422-13104958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 13 | 
| Conread position: | 141-664 | 
| Cow position: | chr6:2375065-2375599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 13 | 
| Conread position: | 141-664 | 
| Cow position: | chr6:24239425-24239958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-664 | 
| Cow position: | chr6:26670503-26669965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 13 | 
| Conread position: | 141-664 | 
| Cow position: | chr6:43618079-43618616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 21 | 
| Conread position: | 141-666 | 
| Cow position: | chr6:27169943-27170477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 91 | 
| Conread position: | 141-674 | 
| Cow position: | chr6:12529855-12530395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 24 | 
| Conread position: | 141-674 | 
| Cow position: | chr6:21973021-21973564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 18 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:185419-184868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 40 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:1822263-1821710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:5949410-5948862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:6566977-6567505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:13944271-13944822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:17046424-17046967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:20560742-20560187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:35876345-35875801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:47042828-47042286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 11 | 
| Conread position: | 141-679 | 
| Cow position: | chr6:51086310-51086858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 11 | 
| Conread position: | 142-366 | 
| Cow position: | chr6:14852214-14851988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 83 | 
| Conread position: | 142-663 | 
| Cow position: | chr6:59918706-59918176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 30 | 
| Conread position: | 142-664 | 
| Cow position: | chr6:16052244-16052780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 12 | 
| Conread position: | 142-679 | 
| Cow position: | chr6:27529638-27529086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 83 | 
| Conread position: | 142-679 | 
| Cow position: | chr6:52693393-52693931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 83 | 
| Conread position: | 151-386 | 
| Cow position: | chr6:40813294-40813057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 74 | 
| Conread position: | 151-388 | 
| Cow position: | chr6:28063708-28063946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 45, 73 | 
| Conread position: | 151-389 | 
| Cow position: | chr6:11274542-11274308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 40, 73 | 
| Conread position: | 154-293 | 
| Cow position: | chr6:25214636-25214777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 38, 71 | 
| Conread position: | 154-679 | 
| Cow position: | chr6:8760923-8760375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 56 | 
| Conread position: | 155-673 | 
| Cow position: | chr6:27470981-27471508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 77 | 
| Conread position: | 156-668 | 
| Cow position: | chr6:40315766-40316288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 75 | 
| Conread position: | 156-668 | 
| Cow position: | chr6:58600864-58601384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 38 | 
| Conread position: | 156-679 | 
| Cow position: | chr6:30479487-30480016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 75 | 
| Conread position: | 159-679 | 
| Cow position: | chr6:6475486-6474952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 77 | 
| Conread position: | 160-679 | 
| Cow position: | chr6:65941444-65940907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 32, 70 | 
| Conread position: | 170-671 | 
| Cow position: | chr6:914027-914538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 62 | 
| Conread position: | 191-679 | 
| Cow position: | chr6:15021635-15022123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 136, 38 | 
| Conread position: | 239-664 | 
| Cow position: | chr6:28491103-28490668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 270, 157 | 
| Conread position: | 271-664 | 
| Cow position: | chr6:68027416-68027822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 66, 84 | 
| Conread position: | 292-679 | 
| Cow position: | chr6:65881727-65882126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 100 | 
| Conread position: | 313-669 | 
| Cow position: | chr6:8202718-8203088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 83 | 
| Conread position: | 315-601 | 
| Cow position: | chr6:26045376-26045668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 129, 73 | 
| Conread position: | 318-679 | 
| Cow position: | chr6:25214766-25215134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 12 | 
| Conread position: | 322-679 | 
| Cow position: | chr6:8021441-8021796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 58 | 
| Conread position: | 330-679 | 
| Cow position: | chr6:55542700-55542350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 63 | 
| Conread position: | 385-661 | 
| Cow position: | chr6:38271507-38271786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 65, 113 | 
| Conread position: | 391-679 | 
| Cow position: | chr6:3276763-3276459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 391-679 | 
| Cow position: | chr6:15279195-15278896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 56, 100 | 
| Conread position: | 391-679 | 
| Cow position: | chr6:39438378-39438680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 394-667 | 
| Cow position: | chr6:40866703-40866414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 397-679 | 
| Cow position: | chr6:56043101-56042804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 50, 40 | 
| Conread position: | 403-679 | 
| Cow position: | chr6:30274268-30273978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 44, 247 | 
| Conread position: | 403-679 | 
| Cow position: | chr6:51730721-51731012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 414-679 | 
| Cow position: | chr6:13316837-13316558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 416-679 | 
| Cow position: | chr6:28169540-28169819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 422-600 | 
| Cow position: | chr6:36526904-36527093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 422-679 | 
| Cow position: | chr6:39334227-39333954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 431-679 | 
| Cow position: | chr6:64716644-64716901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 80, 22 | 
| Conread position: | 432-675 | 
| Cow position: | chr6:10609558-10609818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 443-651 | 
| Cow position: | chr6:14389242-14389465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 444-679 | 
| Cow position: | chr6:58027339-58027588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 449-664 | 
| Cow position: | chr6:13310682-13310460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 83 | 
| Conread position: | 464-679 | 
| Cow position: | chr6:34891439-34891209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 480-679 | 
| Cow position: | chr6:51715241-51715452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 31, 0 | 
Show alignments to all cow chromosomes.
