Cow genome map
| Conread name: | Emb1-C0005191_I18 |
| Conread position: | 1-679 |
| Cow position: | chr7:27584389-27583713 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 1-679 |
| Cow position: | chr7:27786958-27787637 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 2-668 |
| Cow position: | chr7:54644176-54643495 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 314 |
| Conread position: | 28-679 |
| Cow position: | chr7:41875904-41875272 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 130-390 |
| Cow position: | chr7:67428382-67428643 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 136-300 |
| Cow position: | chr7:53991650-53991821 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 136-672 |
| Cow position: | chr7:21853379-21852835 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 140-668 |
| Cow position: | chr7:59679306-59679842 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 141-270 |
| Cow position: | chr7:19924366-19924235 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 141-300 |
| Cow position: | chr7:1610605-1610452 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-301 |
| Cow position: | chr7:5183866-5184023 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 141-364 |
| Cow position: | chr7:21310944-21311160 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-366 |
| Cow position: | chr7:34149559-34149784 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-386 |
| Cow position: | chr7:5662829-5663064 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-390 |
| Cow position: | chr7:64241332-64241084 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-429 |
| Cow position: | chr7:446173-445889 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-447 |
| Cow position: | chr7:3155699-3156006 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 141-486 |
| Cow position: | chr7:6489647-6489990 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 141-600 |
| Cow position: | chr7:21929601-21930067 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-602 |
| Cow position: | chr7:61808686-61809152 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr7:3300702-3300165 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 141-664 |
| Cow position: | chr7:6648202-6647666 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-664 |
| Cow position: | chr7:25439964-25440494 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 141-668 |
| Cow position: | chr7:68481014-68481540 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 141-672 |
| Cow position: | chr7:11447011-11447558 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-673 |
| Cow position: | chr7:16418-15874 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 141-679 |
| Cow position: | chr7:525431-525982 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 141-679 |
| Cow position: | chr7:1372187-1371640 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:7257639-7258179 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 141-679 |
| Cow position: | chr7:8144784-8144227 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:10430964-10430417 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:14139140-14138590 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:20798992-20798436 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:24057894-24058447 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 141-679 |
| Cow position: | chr7:24807997-24807451 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:33405781-33405237 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:34486375-34486922 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 141-679 |
| Cow position: | chr7:38397271-38397821 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 141-679 |
| Cow position: | chr7:39792215-39792776 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 141-679 |
| Cow position: | chr7:63386194-63386734 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 142-678 |
| Cow position: | chr7:29470913-29471465 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 142-679 |
| Cow position: | chr7:21234552-21234004 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 151-679 |
| Cow position: | chr7:21985870-21986432 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 151-679 |
| Cow position: | chr7:58994059-58994599 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 154-674 |
| Cow position: | chr7:21127193-21126661 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 154-679 |
| Cow position: | chr7:46901610-46901074 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 154-679 |
| Cow position: | chr7:55537451-55536918 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 155-679 |
| Cow position: | chr7:45948679-45948138 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 158-602 |
| Cow position: | chr7:32728032-32727594 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 158-679 |
| Cow position: | chr7:7211519-7210990 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 213-668 |
| Cow position: | chr7:15810949-15810463 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 261-667 |
| Cow position: | chr7:59683760-59684175 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 274-679 |
| Cow position: | chr7:61578042-61578461 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 122 |
| Conread position: | 282-679 |
| Cow position: | chr7:20774727-20774326 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 162, 7 |
| Conread position: | 315-680 |
| Cow position: | chr7:67799463-67799831 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 81 |
| Conread position: | 339-679 |
| Cow position: | chr7:27349029-27348670 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 394-674 |
| Cow position: | chr7:64240304-64240002 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 396-679 |
| Cow position: | chr7:5309400-5309107 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 403-679 |
| Cow position: | chr7:67429289-67429577 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 404-668 |
| Cow position: | chr7:29369308-29369030 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 412-602 |
| Cow position: | chr7:1403462-1403644 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 422-679 |
| Cow position: | chr7:445607-445342 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 436-677 |
| Cow position: | chr7:1452390-1452646 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 443-668 |
| Cow position: | chr7:19269672-19269437 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 522-679 |
| Cow position: | chr7:34150149-34150310 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 80, 9 |
Show alignments to all cow chromosomes.