Cow genome map
Conread name: | Emb1-C0005191_I18 |
Conread position: | 1-600 |
Cow position: | chr8:47081374-47081971 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 421 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 40, 66 |
Conread position: | 1-672 |
Cow position: | chr8:38606674-38606016 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 103 |
Conread position: | 1-679 |
Cow position: | chr8:2170854-2170180 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 87 |
Conread position: | 1-679 |
Cow position: | chr8:11832223-11832903 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 102 |
Conread position: | 1-679 |
Cow position: | chr8:25408250-25408921 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 27 |
Conread position: | 1-679 |
Cow position: | chr8:25522925-25523596 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 120 |
Conread position: | 2-679 |
Cow position: | chr8:19330262-19330906 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 94 |
Conread position: | 14-678 |
Cow position: | chr8:13698663-13697992 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 14 |
Conread position: | 126-679 |
Cow position: | chr8:32318930-32318358 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 103 |
Conread position: | 136-667 |
Cow position: | chr8:11802458-11803004 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 194 |
Conread position: | 136-672 |
Cow position: | chr8:2886382-2886934 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 91 |
Conread position: | 136-679 |
Cow position: | chr8:14591266-14590708 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 89 |
Conread position: | 140-664 |
Cow position: | chr8:1319682-1320220 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 84 |
Conread position: | 141-395 |
Cow position: | chr8:41944069-41944325 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 141-421 |
Cow position: | chr8:38391014-38391288 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-459 |
Cow position: | chr8:10742983-10742656 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-555 |
Cow position: | chr8:12449595-12450014 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-597 |
Cow position: | chr8:6684088-6684549 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-663 |
Cow position: | chr8:32631386-32630850 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 13 |
Conread position: | 141-664 |
Cow position: | chr8:6065127-6064598 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 141-674 |
Cow position: | chr8:23771282-23771825 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-678 |
Cow position: | chr8:33589022-33589568 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:3856367-3855831 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:4687043-4687596 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 21 |
Conread position: | 141-679 |
Cow position: | chr8:7161539-7162091 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:8911153-8911695 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 10 |
Conread position: | 141-679 |
Cow position: | chr8:14928237-14927685 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:17311667-17312217 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:24915694-24915142 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:25776025-25775482 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 82 |
Conread position: | 141-679 |
Cow position: | chr8:39195569-39195021 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 84 |
Conread position: | 141-679 |
Cow position: | chr8:42484560-42485110 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:46050830-46051381 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:47661677-47661126 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:49215082-49215635 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:50288280-50287731 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 141-679 |
Cow position: | chr8:50994433-50994964 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 141-679 |
Cow position: | chr8:60061024-60061577 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 142-664 |
Cow position: | chr8:11969637-11969104 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 82 |
Conread position: | 142-679 |
Cow position: | chr8:44243927-44243387 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 90 |
Conread position: | 142-679 |
Cow position: | chr8:50930484-50929936 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 83 |
Conread position: | 151-679 |
Cow position: | chr8:5016837-5017373 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 81 |
Conread position: | 153-679 |
Cow position: | chr8:19051134-19051669 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 72 |
Conread position: | 154-495 |
Cow position: | chr8:36635886-36635547 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 71 |
Conread position: | 154-668 |
Cow position: | chr8:42419778-42419256 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 71 |
Conread position: | 156-664 |
Cow position: | chr8:11762598-11763119 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 66 |
Conread position: | 156-672 |
Cow position: | chr8:30487725-30487197 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 75 |
Conread position: | 156-679 |
Cow position: | chr8:8315794-8315267 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 75 |
Conread position: | 158-533 |
Cow position: | chr8:10366376-10366012 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 243 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 161-679 |
Cow position: | chr8:8308256-8308788 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 70 |
Conread position: | 165-679 |
Cow position: | chr8:59262255-59261725 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 234 |
Conread position: | 195-602 |
Cow position: | chr8:9964750-9964362 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 287 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 252, 33 |
Conread position: | 195-679 |
Cow position: | chr8:45692317-45691828 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 35 |
Conread position: | 201-679 |
Cow position: | chr8:59141028-59141517 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 195 |
Conread position: | 203-672 |
Cow position: | chr8:56883218-56883687 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 27 |
Conread position: | 207-679 |
Cow position: | chr8:28878387-28877910 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 14 |
Conread position: | 223-668 |
Cow position: | chr8:42579886-42579396 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 328 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 108, 7 |
Conread position: | 237-679 |
Cow position: | chr8:42817504-42817056 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 300 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 31, 93 |
Conread position: | 238-678 |
Cow position: | chr8:38585588-38585150 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 72 |
Conread position: | 244-679 |
Cow position: | chr8:35212631-35213075 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 39 |
Conread position: | 294-673 |
Cow position: | chr8:20136812-20136423 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 265 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 153, 73 |
Conread position: | 303-678 |
Cow position: | chr8:46147532-46147148 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 263 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 141, 23 |
Conread position: | 313-678 |
Cow position: | chr8:49859948-49859570 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 257 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 134, 83 |
Conread position: | 345-679 |
Cow position: | chr8:42657120-42656777 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 238 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 99, 51 |
Conread position: | 380-664 |
Cow position: | chr8:61906038-61906338 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 416-640 |
Cow position: | chr8:38391572-38391812 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 433-679 |
Cow position: | chr8:29007578-29007833 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 181 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 78, 14 |
Conread position: | 443-679 |
Cow position: | chr8:41644723-41644477 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 170 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 98, 56 |
Conread position: | 490-679 |
Cow position: | chr8:3785626-3785830 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 145 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 499-674 |
Cow position: | chr8:36635500-36635316 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.