Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 62
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 122
               

               Conread position:
               5-597
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 128
               

               Conread position:
               5-679
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               13-664
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               15-589
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 89
               

               Conread position:
               25-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               25-584
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 65
               

               Conread position:
               126-679
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               126-679
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 103
               

               Conread position:
               135-679
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               136-317
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               137-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               141-288
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-485
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               141-603
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-663
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-668
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-563
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               146-464
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               146-679
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               345
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               256, 38
               

               Conread position:
               162-664
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               170-665
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               224-668
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               250-679
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 13
               

               Conread position:
               267-675
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 38
               

               Conread position:
               267-679
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               148, 129
               

               Conread position:
               305-668
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 93
               

               Conread position:
               322-664
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               356-674
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               365-679
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 70
               

               Conread position:
               385-674
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               403-664
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 171
               

               Conread position:
               403-675
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               404-679
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               433-668
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 185
               

               Conread position:
               454-675
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 54
               
Show alignments to all cow chromosomes.