Cow genome map


           Conread name:
           Emb1-C0005191_I18
        

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               85, 97
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 58
               

               Conread position:
               1-679
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 49
               

               Conread position:
               2-679
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 245
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               5-561
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               13-367
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 90
               

               Conread position:
               13-664
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 216
               

               Conread position:
               13-664
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 175
               

               Conread position:
               29-668
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 126
               

               Conread position:
               51-679
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               387
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               137, 168
               

               Conread position:
               86-679
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               135-674
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               136-668
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 186
               

               Conread position:
               136-679
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               137-680
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               141-270
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-278
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-366
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-390
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-393
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-430
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-574
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               141-579
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               141-597
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-602
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               141-664
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-665
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 13
               

               Conread position:
               141-669
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               141-674
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               141-679
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               141-680
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               142-306
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               142-307
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               142-358
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               142-393
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               142-664
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               142-679
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               149-423
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               151-390
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               151-584
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               151-664
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               151-664
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               151-669
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               151-674
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               151-678
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               151-679
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 85
               

               Conread position:
               154-676
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               156-640
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               156-651
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               156-664
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 77
               

               Conread position:
               157-672
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               157-679
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               158-680
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               333
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               172-679
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               201-668
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               201-672
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 20
               

               Conread position:
               207-668
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               233, 21
               

               Conread position:
               235-679
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               267-679
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 129
               

               Conread position:
               270-668
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 97
               

               Conread position:
               277-664
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 119
               

               Conread position:
               305-679
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 88
               

               Conread position:
               307-674
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 42
               

               Conread position:
               315-679
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 69
               

               Conread position:
               318-679
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               322-662
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               362-602
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               365-653
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               366-664
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 180
               

               Conread position:
               385-679
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               391-601
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 74
               

               Conread position:
               391-679
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               407-601
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 183
               

               Conread position:
               416-664
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               422-595
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               434-679
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 161
               

               Conread position:
               436-679
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               437-679
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               443-664
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 25
               
Show alignments to all cow chromosomes.