Cow genome map
| Conread name: | Emb1-C0005191_J10 |
| Conread position: | 8-289 |
| Cow position: | chr15:31325836-31326119 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 8-296 |
| Cow position: | chr15:31640835-31640545 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 9-457 |
| Cow position: | chr15:33261507-33261973 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 10-289 |
| Cow position: | chr15:33278151-33278432 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 10-289 |
| Cow position: | chr15:33287251-33287532 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 10-289 |
| Cow position: | chr15:33313146-33313426 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 12-296 |
| Cow position: | chr15:33274848-33275133 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 14-296 |
| Cow position: | chr15:32217060-32216775 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 20-409 |
| Cow position: | chr15:32273487-32273080 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 28-411 |
| Cow position: | chr15:31107568-31107969 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 30-289 |
| Cow position: | chr15:32294654-32294914 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 31-289 |
| Cow position: | chr15:31159249-31158989 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 145, 172 |
| Conread position: | 31-289 |
| Cow position: | chr15:31184561-31184301 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 145, 172 |
| Conread position: | 33-289 |
| Cow position: | chr15:31394975-31395233 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 207 |
| Conread position: | 33-296 |
| Cow position: | chr15:32046064-32046329 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 34-415 |
| Cow position: | chr15:31147032-31146633 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 34-415 |
| Cow position: | chr15:31170858-31170465 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 54-296 |
| Cow position: | chr15:31914910-31914667 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 54-296 |
| Cow position: | chr15:31938472-31938715 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 55-289 |
| Cow position: | chr15:31411209-31411445 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 55-416 |
| Cow position: | chr15:31881424-31881045 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 121, 9 |
| Conread position: | 60-289 |
| Cow position: | chr15:31389434-31389665 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 113, 180 |
| Conread position: | 60-295 |
| Cow position: | chr15:31287735-31287498 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 60-296 |
| Cow position: | chr15:31869158-31868920 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 60-296 |
| Cow position: | chr15:32257908-32258146 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 66-289 |
| Cow position: | chr15:31338652-31338877 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 135 |
| Conread position: | 66-289 |
| Cow position: | chr15:31348679-31348904 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 135 |
| Conread position: | 66-409 |
| Cow position: | chr15:32233489-32233128 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 68-289 |
| Cow position: | chr15:31971547-31971324 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 72-289 |
| Cow position: | chr15:31119896-31119677 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 296-562 |
| Cow position: | chr15:31127294-31127562 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 223 |
Show alignments to all cow chromosomes.