Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-394
Cow position: chr12:19871970-19872358 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 141, 42

Conread position: 1-492
Cow position: chr12:15259185-15258690 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 174

Conread position: 1-510
Cow position: chr12:3950806-3950299 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 49

Conread position: 4-600
Cow position: chr12:25606225-25606844 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 119

Conread position: 5-279
Cow position: chr12:25902141-25901875 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 208, 114

Conread position: 5-599
Cow position: chr12:16544052-16543442 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 6-394
Cow position: chr12:17007733-17008134 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 38

Conread position: 6-395
Cow position: chr12:36568512-36568128 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 43

Conread position: 6-457
Cow position: chr12:28572238-28572679 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 309
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 54

Conread position: 6-490
Cow position: chr12:31742231-31741743 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 37

Conread position: 6-491
Cow position: chr12:42602701-42602217 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 42

Conread position: 6-510
Cow position: chr12:27563848-27563331 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 240

Conread position: 6-541
Cow position: chr12:31228113-31228651 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 360
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 120

Conread position: 6-578
Cow position: chr12:1883983-1883418 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 306

Conread position: 6-599
Cow position: chr12:27055137-27055739 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 6-602
Cow position: chr12:28558851-28559441 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 57

Conread position: 7-287
Cow position: chr12:7398566-7398862 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 80

Conread position: 7-402
Cow position: chr12:3070647-3071048 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 264
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 42

Conread position: 7-535
Cow position: chr12:1774125-1773587 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 370
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 36

Conread position: 7-600
Cow position: chr12:27803514-27802903 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 165

Conread position: 8-324
Cow position: chr12:3050426-3050097 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 51

Conread position: 10-451
Cow position: chr12:48437373-48436925 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 320
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 49, 22

Conread position: 10-535
Cow position: chr12:1890055-1889504 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 354
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 341

Conread position: 10-598
Cow position: chr12:31430027-31429438 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 182

Conread position: 12-376
Cow position: chr12:30016286-30015913 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 50

Conread position: 12-458
Cow position: chr12:30011179-30010727 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 297
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 149, 50

Conread position: 14-313
Cow position: chr12:27808936-27808621 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 100

Conread position: 16-509
Cow position: chr12:47800273-47799779 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 258

Conread position: 17-393
Cow position: chr12:45541273-45541663 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 25, 141

Conread position: 22-390
Cow position: chr12:24440363-24440745 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 29

Conread position: 22-396
Cow position: chr12:22047036-22047406 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 18

Conread position: 22-602
Cow position: chr12:32285694-32286261 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 382
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 267, 112

Conread position: 27-498
Cow position: chr12:20312599-20312139 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 31-287
Cow position: chr12:13688644-13688902 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 29

Conread position: 32-600
Cow position: chr12:25312820-25312238 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 33-528
Cow position: chr12:45555860-45555363 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 18

Conread position: 35-571
Cow position: chr12:6240865-6241424 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 359

Conread position: 40-406
Cow position: chr12:7206038-7205671 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 10

Conread position: 42-565
Cow position: chr12:10847053-10846551 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 128

Conread position: 45-601
Cow position: chr12:22516166-22515581 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 378
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 97, 20

Conread position: 50-491
Cow position: chr12:29484314-29483860 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 301
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 92, 33

Conread position: 50-599
Cow position: chr12:29969152-29969717 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 299

Conread position: 51-566
Cow position: chr12:42181564-42181027 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 260

Conread position: 51-594
Cow position: chr12:30170236-30170802 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 364
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 295

Conread position: 52-388
Cow position: chr12:26869221-26868869 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 34

Conread position: 52-458
Cow position: chr12:35707355-35706937 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 12, 62

Conread position: 53-594
Cow position: chr12:24558914-24559490 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 293

Conread position: 59-495
Cow position: chr12:30605561-30605135 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 281
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 175, 74

Conread position: 60-413
Cow position: chr12:35807267-35807630 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 102, 74

Conread position: 60-511
Cow position: chr12:42254244-42254714 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 309
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 216

Conread position: 66-476
Cow position: chr12:1245882-1246310 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 276
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 44

Conread position: 66-491
Cow position: chr12:6719913-6720354 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 285
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 76

Conread position: 66-599
Cow position: chr12:1223740-1223212 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 58

Conread position: 74-491
Cow position: chr12:20326372-20326800 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 66, 340

Conread position: 75-599
Cow position: chr12:30596064-30596605 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 322

Conread position: 76-485
Cow position: chr12:36313465-36313872 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 271
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 203

Conread position: 77-510
Cow position: chr12:30753326-30753765 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 301
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 196

Conread position: 79-510
Cow position: chr12:31959496-31959925 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 299
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 63, 50

Conread position: 80-314
Cow position: chr12:28812166-28812417 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 134

Conread position: 83-504
Cow position: chr12:15429994-15429556 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 283
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 290

Conread position: 84-602
Cow position: chr12:40910683-40910128 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 372
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 303

Conread position: 87-400
Cow position: chr12:3568560-3568881 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 99

Conread position: 101-600
Cow position: chr12:47803779-47804291 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 104-495
Cow position: chr12:25560998-25561400 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 244

Conread position: 104-561
Cow position: chr12:12304031-12304469 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 296
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 170

Conread position: 110-537
Cow position: chr12:17881505-17881937 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 286
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 164

Conread position: 110-575
Cow position: chr12:27039130-27038630 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 136

Conread position: 120-397
Cow position: chr12:41979656-41979364 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 122-540
Cow position: chr12:33323853-33323416 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 293
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 229

Conread position: 139-456
Cow position: chr12:16851343-16851015 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 47

Conread position: 140-600
Cow position: chr12:34466330-34465862 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 317
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 122

Conread position: 141-493
Cow position: chr12:731254-730908 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 224
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 146, 23

Conread position: 145-602
Cow position: chr12:45820682-45820230 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 300
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 19

Conread position: 156-600
Cow position: chr12:23983351-23983801 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 307
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 92

Conread position: 157-510
Cow position: chr12:29995776-29995418 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 236

Conread position: 159-534
Cow position: chr12:3757348-3756974 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 5

Conread position: 159-600
Cow position: chr12:33457839-33458277 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 6

Conread position: 163-432
Cow position: chr12:34103442-34103164 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 17

Conread position: 163-600
Cow position: chr12:9229791-9229360 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 297
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 132

Conread position: 164-522
Cow position: chr12:8869189-8868821 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 46, 16

Conread position: 164-592
Cow position: chr12:31198463-31198896 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 12

Conread position: 164-600
Cow position: chr12:18769383-18768935 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 111

Conread position: 164-603
Cow position: chr12:25619684-25619238 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 40

Conread position: 166-535
Cow position: chr12:30688035-30688407 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 251
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 9

Conread position: 170-419
Cow position: chr12:15622757-15622487 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 173-510
Cow position: chr12:22881754-22882102 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 30

Conread position: 174-451
Cow position: chr12:12939227-12938934 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 274

Conread position: 180-600
Cow position: chr12:8595606-8596017 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 292
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 35

Conread position: 199-535
Cow position: chr12:6210421-6210084 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 66

Conread position: 199-600
Cow position: chr12:19715292-19714905 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 265
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 200, 50

Conread position: 200-485
Cow position: chr12:12178658-12178943 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 200

Conread position: 200-510
Cow position: chr12:25320660-25320960 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 83

Conread position: 200-600
Cow position: chr12:5714365-5714774 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 131, 87

Conread position: 202-402
Cow position: chr12:35984870-35985077 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 206-527
Cow position: chr12:8104501-8104191 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 120

Conread position: 206-535
Cow position: chr12:5635705-5635379 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 76

Conread position: 206-573
Cow position: chr12:43104272-43104616 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 57

Conread position: 206-594
Cow position: chr12:29448386-29448775 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 115

Conread position: 206-605
Cow position: chr12:12331758-12331367 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 29, 46

Conread position: 211-440
Cow position: chr12:32399945-32400177 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 13

Conread position: 211-510
Cow position: chr12:38484650-38484348 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 37

Conread position: 211-535
Cow position: chr12:28213266-28213583 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 54

Conread position: 211-537
Cow position: chr12:23797851-23798175 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 116

Conread position: 211-594
Cow position: chr12:1504774-1505147 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 211-595
Cow position: chr12:1487785-1488167 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 87, 80

Conread position: 211-600
Cow position: chr12:30064692-30065070 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 54

Conread position: 211-601
Cow position: chr12:5899276-5899646 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 39

Conread position: 213-600
Cow position: chr12:5539215-5538836 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 168, 49

Conread position: 223-600
Cow position: chr12:44057266-44057654 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 6, 41

Conread position: 227-417
Cow position: chr12:18417327-18417523 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 178

Conread position: 227-491
Cow position: chr12:40028991-40028728 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 44

Conread position: 227-600
Cow position: chr12:41642199-41642569 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 36

Conread position: 235-403
Cow position: chr12:21862012-21861845 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 28

Conread position: 235-599
Cow position: chr12:30210250-30210625 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 141

Conread position: 236-594
Cow position: chr12:32413280-32413648 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 239-600
Cow position: chr12:1030756-1031120 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 102

Conread position: 240-404
Cow position: chr12:6117677-6117843 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 103

Conread position: 240-508
Cow position: chr12:28748711-28748983 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 150

Conread position: 240-605
Cow position: chr12:48425498-48425852 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 245-600
Cow position: chr12:45226200-45225852 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 154, 12

Conread position: 249-405
Cow position: chr12:11696461-11696622 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 251-600
Cow position: chr12:34850052-34849722 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 38

Conread position: 251-600
Cow position: chr12:34852691-34852359 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 14

Conread position: 252-491
Cow position: chr12:3906257-3906499 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 66

Conread position: 253-601
Cow position: chr12:8626143-8625769 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 103

Conread position: 254-605
Cow position: chr12:7299679-7299310 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 180

Conread position: 265-510
Cow position: chr12:33976001-33976245 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 149

Conread position: 266-600
Cow position: chr12:34161218-34161559 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 57

Conread position: 286-530
Cow position: chr12:23855657-23855901 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 118

Conread position: 290-600
Cow position: chr12:22689573-22689870 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 15

Conread position: 300-577
Cow position: chr12:14325437-14325157 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 131

Conread position: 300-595
Cow position: chr12:27365762-27366058 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 36

Conread position: 305-510
Cow position: chr12:12637344-12637137 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 305-589
Cow position: chr12:31517326-31517038 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 18

Conread position: 308-510
Cow position: chr12:14523787-14523977 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 186, 86

Conread position: 308-589
Cow position: chr12:17110045-17109769 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 202, 106

Conread position: 309-593
Cow position: chr12:15230971-15230690 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 324-599
Cow position: chr12:10763124-10763401 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 67

Conread position: 325-600
Cow position: chr12:7996276-7996548 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 166, 5

Conread position: 327-498
Cow position: chr12:41596679-41596852 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 327-588
Cow position: chr12:4020628-4020364 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 113

Conread position: 331-574
Cow position: chr12:24204442-24204201 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 90

Conread position: 333-554
Cow position: chr12:7110070-7110292 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 160, 60

Conread position: 334-535
Cow position: chr12:26217955-26217750 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 71

Conread position: 335-600
Cow position: chr12:42918343-42918601 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 7

Conread position: 335-601
Cow position: chr12:37137651-37137396 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 337-600
Cow position: chr12:5658870-5658609 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 78, 16

Conread position: 340-594
Cow position: chr12:29691322-29691065 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 28

Conread position: 348-583
Cow position: chr12:31528968-31528735 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 13, 53

Conread position: 354-600
Cow position: chr12:30414057-30413802 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 144, 43

Conread position: 361-506
Cow position: chr12:33757015-33756870 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 125

Conread position: 363-593
Cow position: chr12:3615900-3616132 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 38

Conread position: 369-600
Cow position: chr12:6687797-6688041 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 21

Conread position: 370-600
Cow position: chr12:40931707-40931478 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 139, 161

Conread position: 370-605
Cow position: chr12:4582851-4583084 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 23

Conread position: 370-605
Cow position: chr12:40716134-40715907 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 374-589
Cow position: chr12:31257938-31258133 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 374-594
Cow position: chr12:42477923-42478141 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 25

Conread position: 374-600
Cow position: chr12:5680591-5680821 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 27

Conread position: 381-602
Cow position: chr12:18966837-18966617 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 26

Conread position: 386-594
Cow position: chr12:47486752-47486965 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 166

Conread position: 396-595
Cow position: chr12:13657809-13657610 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 116, 17

Conread position: 403-600
Cow position: chr12:7645865-7645673 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 30

Conread position: 404-600
Cow position: chr12:3816423-3816624 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 59

Conread position: 412-600
Cow position: chr12:34242378-34242188 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 128

Conread position: 414-601
Cow position: chr12:5497872-5497691 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 45

Conread position: 414-605
Cow position: chr12:18093843-18094032 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 28

Conread position: 415-583
Cow position: chr12:45541662-45541828 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 26

Conread position: 427-599
Cow position: chr12:43671670-43671838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 20

Conread position: 428-592
Cow position: chr12:25933648-25933812 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 79, 115

Conread position: 429-600
Cow position: chr12:14855779-14855950 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 15

Conread position: 429-600
Cow position: chr12:16205692-16205861 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 13

Conread position: 430-589
Cow position: chr12:39781374-39781214 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 110

Conread position: 437-593
Cow position: chr12:8981080-8980924 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 6

Conread position: 447-600
Cow position: chr12:7274717-7274568 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 93

Conread position: 447-600
Cow position: chr12:11081117-11080962 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 96

Conread position: 449-585
Cow position: chr12:34090113-34090248 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 21

Conread position: 449-589
Cow position: chr12:16850929-16850789 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 98

Conread position: 455-600
Cow position: chr12:11520163-11520310 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 90

Conread position: 455-601
Cow position: chr12:28017036-28017186 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 91

Conread position: 466-600
Cow position: chr12:749362-749495 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 73

Conread position: 470-601
Cow position: chr12:24681824-24681957 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 72

Conread position: 489-600
Cow position: chr12:38096147-38096261 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 56

Show alignments to all cow chromosomes.