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Cow genome map

           
Conread name:
           
Emb1-C0005191_K10
        

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:18197394-18197070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr13:20649572-20650086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr13:17820846-17821465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr13:51941151-51940537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
2-594
               

               
Cow position:
               
chr13:14716914-14717523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
3-510
               

               
Cow position:
               
chr13:60974480-60973980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
139, 35
               

               
Conread position:
               
5-511
               

               
Cow position:
               
chr13:25531377-25531890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
5-600
               

               
Cow position:
               
chr13:6974584-6973954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
137, 263
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr13:46105172-46105460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr13:25882808-25883160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 320
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr13:14544523-14544133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr13:60690305-60690711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr13:1346586-1346177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr13:5752009-5752464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
6-482
               

               
Cow position:
               
chr13:34333535-34334011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
6-484
               

               
Cow position:
               
chr13:41254038-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
6-484
               

               
Cow position:
               
chr13:49805379-49804903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
6-487
               

               
Cow position:
               
chr13:1368429-1367947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr13:30651587-30651109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr13:33876075-33875596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr13:34941245-34941729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr13:52585613-52586116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
6-494
               

               
Cow position:
               
chr13:19882627-19883119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
6-499
               

               
Cow position:
               
chr13:11571098-11570618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
6-509
               

               
Cow position:
               
chr13:311844-311340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
6-510
               

               
Cow position:
               
chr13:20879424-20879923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
6-511
               

               
Cow position:
               
chr13:42114422-42113921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
6-533
               

               
Cow position:
               
chr13:46182185-46181666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
6-535
               

               
Cow position:
               
chr13:971484-972024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
6-539
               

               
Cow position:
               
chr13:20563403-20562862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-546
               

               
Cow position:
               
chr13:36771010-36771557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
6-554
               

               
Cow position:
               
chr13:15869530-15868966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-555
               

               
Cow position:
               
chr13:3015755-3016319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
6-566
               

               
Cow position:
               
chr13:60508711-60509277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
204, 45
               

               
Conread position:
               
6-568
               

               
Cow position:
               
chr13:7663021-7663577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
6-588
               

               
Cow position:
               
chr13:32536067-32535478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
6-589
               

               
Cow position:
               
chr13:38897839-38898425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
6-592
               

               
Cow position:
               
chr13:57493772-57494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr13:9803475-9802878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 208
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr13:26382810-26383408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 377
               

               
Conread position:
               
6-602
               

               
Cow position:
               
chr13:33160598-33161186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 205
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr13:32836156-32835893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
7-491
               

               
Cow position:
               
chr13:12546495-12546987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
7-594
               

               
Cow position:
               
chr13:59687453-59688065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
7-600
               

               
Cow position:
               
chr13:21235280-21235876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
7-605
               

               
Cow position:
               
chr13:12233041-12233649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 271
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr13:10755327-10755005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr13:21402381-21402753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
9-511
               

               
Cow position:
               
chr13:43384220-43384728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 290
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr13:24373818-24373311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
12-498
               

               
Cow position:
               
chr13:53535891-53536395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
12-530
               

               
Cow position:
               
chr13:6945793-6945255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 408
               

               
Conread position:
               
15-520
               

               
Cow position:
               
chr13:47590738-47591244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
22-481
               

               
Cow position:
               
chr13:24285954-24285487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
23-600
               

               
Cow position:
               
chr13:661238-661827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
27-578
               

               
Cow position:
               
chr13:11834088-11834646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
33-599
               

               
Cow position:
               
chr13:62169153-62169731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 134
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr13:6054764-6054500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
40-402
               

               
Cow position:
               
chr13:562753-563135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
50-491
               

               
Cow position:
               
chr13:46516436-46515982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
50-600
               

               
Cow position:
               
chr13:7010843-7010285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 288
               

               
Conread position:
               
51-382
               

               
Cow position:
               
chr13:6606647-6606995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
51-599
               

               
Cow position:
               
chr13:32773718-32773174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
51-605
               

               
Cow position:
               
chr13:32166929-32167506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 253
               

               
Conread position:
               
52-422
               

               
Cow position:
               
chr13:1767141-1766759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 151
               

               
Conread position:
               
52-490
               

               
Cow position:
               
chr13:46324418-46324867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
52-492
               

               
Cow position:
               
chr13:1170840-1170382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
52-535
               

               
Cow position:
               
chr13:2414397-2413903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
52-593
               

               
Cow position:
               
chr13:12448616-12449168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 361
               

               
Conread position:
               
60-510
               

               
Cow position:
               
chr13:10988710-10989169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
80, 278
               

               
Conread position:
               
60-535
               

               
Cow position:
               
chr13:17158500-17159005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 360
               

               
Conread position:
               
66-461
               

               
Cow position:
               
chr13:53566942-53566544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
66-491
               

               
Cow position:
               
chr13:17855730-17855293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 261
               

               
Conread position:
               
66-510
               

               
Cow position:
               
chr13:1042598-1043068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 280
               

               
Conread position:
               
66-511
               

               
Cow position:
               
chr13:6616390-6616859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 337
               

               
Conread position:
               
66-544
               

               
Cow position:
               
chr13:21276214-21275724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 214
               

               
Conread position:
               
66-600
               

               
Cow position:
               
chr13:25434771-25435314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr13:17613703-17613261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
69-397
               

               
Cow position:
               
chr13:18835541-18835207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 208
               

               
Conread position:
               
70-600
               

               
Cow position:
               
chr13:47502362-47502899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
71-594
               

               
Cow position:
               
chr13:32717519-32718048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
74-600
               

               
Cow position:
               
chr13:21155141-21155666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 336
               

               
Conread position:
               
75-536
               

               
Cow position:
               
chr13:18351192-18350708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 191
               

               
Conread position:
               
75-594
               

               
Cow position:
               
chr13:33282377-33281821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
79-599
               

               
Cow position:
               
chr13:8838653-8839171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
80-404
               

               
Cow position:
               
chr13:20863674-20864007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
81-566
               

               
Cow position:
               
chr13:2774461-2773962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr13:6153439-6153883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 256
               

               
Conread position:
               
90-510
               

               
Cow position:
               
chr13:4208484-4208912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 263
               

               
Conread position:
               
97-522
               

               
Cow position:
               
chr13:17622611-17622175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
104-440
               

               
Cow position:
               
chr13:5091342-5091697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
105-535
               

               
Cow position:
               
chr13:27524943-27525387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 234
               

               
Conread position:
               
108-599
               

               
Cow position:
               
chr13:17886809-17886328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
108-600
               

               
Cow position:
               
chr13:9125989-9125481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
110-540
               

               
Cow position:
               
chr13:37382125-37381669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 326
               

               
Conread position:
               
110-605
               

               
Cow position:
               
chr13:44202303-44201796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
111-535
               

               
Cow position:
               
chr13:55843797-55843359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
120-491
               

               
Cow position:
               
chr13:32283423-32283049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
122-534
               

               
Cow position:
               
chr13:54080502-54080940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 260
               

               
Conread position:
               
126-600
               

               
Cow position:
               
chr13:25537939-25537429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 232
               

               
Conread position:
               
139-586
               

               
Cow position:
               
chr13:43194454-43193991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
139-593
               

               
Cow position:
               
chr13:23266011-23265548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
139-600
               

               
Cow position:
               
chr13:6759508-6759976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 318
               

               
Conread position:
               
139-600
               

               
Cow position:
               
chr13:12521502-12521969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
140-558
               

               
Cow position:
               
chr13:7076531-7076107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
141-600
               

               
Cow position:
               
chr13:42200890-42200412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
142-600
               

               
Cow position:
               
chr13:13577766-13578225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
145-396
               

               
Cow position:
               
chr13:24539768-24539503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
145-594
               

               
Cow position:
               
chr13:6079143-6079605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
145-600
               

               
Cow position:
               
chr13:46291924-46291465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
363, 314
               

               
Conread position:
               
145-600
               

               
Cow position:
               
chr13:60967040-60966571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
146-510
               

               
Cow position:
               
chr13:18244129-18243763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
148-521
               

               
Cow position:
               
chr13:27314407-27314022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
150-599
               

               
Cow position:
               
chr13:60650657-60651096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
153-491
               

               
Cow position:
               
chr13:23166831-23167180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 141
               

               
Conread position:
               
153-600
               

               
Cow position:
               
chr13:34761925-34761494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
153-601
               

               
Cow position:
               
chr13:20839823-20839371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
156-600
               

               
Cow position:
               
chr13:18166992-18166524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
159-502
               

               
Cow position:
               
chr13:46458876-46458533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
159-600
               

               
Cow position:
               
chr13:6621340-6621781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
159-605
               

               
Cow position:
               
chr13:54969563-54970001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
164-490
               

               
Cow position:
               
chr13:48037874-48037545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
164-534
               

               
Cow position:
               
chr13:26261540-26261914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
164-600
               

               
Cow position:
               
chr13:54095058-54094619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr13:47863446-47863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 196
               

               
Conread position:
               
168-601
               

               
Cow position:
               
chr13:24715487-24715040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
170-593
               

               
Cow position:
               
chr13:49848165-49847743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
171-459
               

               
Cow position:
               
chr13:8607273-8607567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr13:7262637-7262387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
174-479
               

               
Cow position:
               
chr13:60487212-60487527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 254
               

               
Conread position:
               
174-572
               

               
Cow position:
               
chr13:24280492-24280094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
174-600
               

               
Cow position:
               
chr13:9665319-9664874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 255
               

               
Conread position:
               
174-600
               

               
Cow position:
               
chr13:15945744-15945285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
176-600
               

               
Cow position:
               
chr13:10932794-10932365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 161
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr13:29631090-29630684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr13:34995088-34995520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
180-601
               

               
Cow position:
               
chr13:20466057-20466477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
180-605
               

               
Cow position:
               
chr13:16343924-16343498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
189-392
               

               
Cow position:
               
chr13:50823327-50823533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
192-600
               

               
Cow position:
               
chr13:8245113-8245522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
199-600
               

               
Cow position:
               
chr13:1558321-1558704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
199-600
               

               
Cow position:
               
chr13:11767831-11768235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
200-535
               

               
Cow position:
               
chr13:3315464-3315802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 187
               

               
Conread position:
               
200-539
               

               
Cow position:
               
chr13:15192684-15193017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
200-605
               

               
Cow position:
               
chr13:4664652-4665063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
204-530
               

               
Cow position:
               
chr13:46112173-46111847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
204-594
               

               
Cow position:
               
chr13:2192914-2192535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr13:14227131-14226934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
206-505
               

               
Cow position:
               
chr13:33631324-33631035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
206-520
               

               
Cow position:
               
chr13:46636928-46637231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
206-563
               

               
Cow position:
               
chr13:35718930-35719291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
206-593
               

               
Cow position:
               
chr13:30510263-30509882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
206-594
               

               
Cow position:
               
chr13:17347011-17346627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
206-594
               

               
Cow position:
               
chr13:46284416-46284792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
206-600
               

               
Cow position:
               
chr13:22886788-22887180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
206-600
               

               
Cow position:
               
chr13:29814745-29814362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
206-601
               

               
Cow position:
               
chr13:1959213-1958816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr13:2302639-2302833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
219-600
               

               
Cow position:
               
chr13:10845784-10845410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
274, 46
               

               
Conread position:
               
222-521
               

               
Cow position:
               
chr13:14771649-14771340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 191
               

               
Conread position:
               
224-605
               

               
Cow position:
               
chr13:23586309-23585897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
227-482
               

               
Cow position:
               
chr13:22276983-22277248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
227-592
               

               
Cow position:
               
chr13:21627701-21628063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
231-519
               

               
Cow position:
               
chr13:58484932-58484664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
241-589
               

               
Cow position:
               
chr13:46430132-46430484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
241-595
               

               
Cow position:
               
chr13:12207215-12206858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
242-599
               

               
Cow position:
               
chr13:56673795-56674155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
243-586
               

               
Cow position:
               
chr13:50739335-50738994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
243-600
               

               
Cow position:
               
chr13:52251628-52251990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
251-433
               

               
Cow position:
               
chr13:39699967-39699783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
251-535
               

               
Cow position:
               
chr13:3796304-3796016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
251-555
               

               
Cow position:
               
chr13:15110483-15110169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
251-602
               

               
Cow position:
               
chr13:19188463-19188105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr13:32657636-32657922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
254-592
               

               
Cow position:
               
chr13:37558440-37558101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
257-528
               

               
Cow position:
               
chr13:8524460-8524733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
258-509
               

               
Cow position:
               
chr13:5758189-5758440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr13:24230368-24230082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
266-600
               

               
Cow position:
               
chr13:47188591-47188253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 236
               

               
Conread position:
               
267-588
               

               
Cow position:
               
chr13:20180564-20180237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
272-605
               

               
Cow position:
               
chr13:33975559-33975237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
285-600
               

               
Cow position:
               
chr13:2803595-2803278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
286-521
               

               
Cow position:
               
chr13:57325976-57326210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
286-600
               

               
Cow position:
               
chr13:21563867-21563537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
287-600
               

               
Cow position:
               
chr13:12745795-12745482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
293-602
               

               
Cow position:
               
chr13:14576324-14576006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
300-599
               

               
Cow position:
               
chr13:22075784-22075481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
300-600
               

               
Cow position:
               
chr13:40464328-40464039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
300-602
               

               
Cow position:
               
chr13:47322293-47322601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
305-605
               

               
Cow position:
               
chr13:49200742-49200446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
307-569
               

               
Cow position:
               
chr13:26508564-26508324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
307-602
               

               
Cow position:
               
chr13:12324285-12323992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
308-595
               

               
Cow position:
               
chr13:49760709-49760434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
308-600
               

               
Cow position:
               
chr13:49457774-49457494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
308-605
               

               
Cow position:
               
chr13:43166929-43167227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
309-601
               

               
Cow position:
               
chr13:13446061-13446346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
309-605
               

               
Cow position:
               
chr13:43155759-43156051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
310-601
               

               
Cow position:
               
chr13:15194629-15194930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
312-593
               

               
Cow position:
               
chr13:58348179-58347902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
316-594
               

               
Cow position:
               
chr13:18551087-18550820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
324-499
               

               
Cow position:
               
chr13:22227632-22227807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
324-578
               

               
Cow position:
               
chr13:58324477-58324223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
324-600
               

               
Cow position:
               
chr13:26522862-26523127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
169, 95
               

               
Conread position:
               
326-557
               

               
Cow position:
               
chr13:54471095-54470869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
326-599
               

               
Cow position:
               
chr13:54695832-54696087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
328-572
               

               
Cow position:
               
chr13:9082926-9083168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
330-535
               

               
Cow position:
               
chr13:33954950-33955152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
330-583
               

               
Cow position:
               
chr13:35564377-35564141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
349-598
               

               
Cow position:
               
chr13:15090847-15091096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
350-599
               

               
Cow position:
               
chr13:6887936-6887692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
351-594
               

               
Cow position:
               
chr13:34665188-34664946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
351-602
               

               
Cow position:
               
chr13:21888128-21888383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
352-592
               

               
Cow position:
               
chr13:52748738-52748977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
356-600
               

               
Cow position:
               
chr13:30271378-30271133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
361-569
               

               
Cow position:
               
chr13:53788057-53788268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
362-589
               

               
Cow position:
               
chr13:52966921-52966697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
362-599
               

               
Cow position:
               
chr13:18761684-18761918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
374-567
               

               
Cow position:
               
chr13:11794476-11794287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
374-600
               

               
Cow position:
               
chr13:38631539-38631771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
378-600
               

               
Cow position:
               
chr13:17796409-17796177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
379-599
               

               
Cow position:
               
chr13:32657411-32657193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
386-600
               

               
Cow position:
               
chr13:20156506-20156296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
390-589
               

               
Cow position:
               
chr13:52568980-52569183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
396-599
               

               
Cow position:
               
chr13:32904795-32904590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
396-600
               

               
Cow position:
               
chr13:54814897-54815104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
401-598
               

               
Cow position:
               
chr13:58620936-58621133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
401-600
               

               
Cow position:
               
chr13:29034812-29034627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
409-594
               

               
Cow position:
               
chr13:29820205-29820391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
415-600
               

               
Cow position:
               
chr13:8822859-8822679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
415-600
               

               
Cow position:
               
chr13:31852759-31852577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
418-594
               

               
Cow position:
               
chr13:20826019-20825847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
423-601
               

               
Cow position:
               
chr13:46353529-46353700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
424-599
               

               
Cow position:
               
chr13:9161911-9161727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
424-600
               

               
Cow position:
               
chr13:11463369-11463540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
427-594
               

               
Cow position:
               
chr13:18665720-18665554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
432-599
               

               
Cow position:
               
chr13:50823832-50824005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
433-600
               

               
Cow position:
               
chr13:58615167-58614997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
437-597
               

               
Cow position:
               
chr13:62267249-62267412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
443-587
               

               
Cow position:
               
chr13:25207083-25206936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
443-597
               

               
Cow position:
               
chr13:54564668-54564824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
444-600
               

               
Cow position:
               
chr13:22021543-22021386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
446-599
               

               
Cow position:
               
chr13:58762635-58762790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
446-600
               

               
Cow position:
               
chr13:22227794-22227941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
449-600
               

               
Cow position:
               
chr13:57341330-57341481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
452-601
               

               
Cow position:
               
chr13:34689891-34689740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
457-605
               

               
Cow position:
               
chr13:6927257-6927112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
460-583
               

               
Cow position:
               
chr13:26507886-26507761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
460-595
               

               
Cow position:
               
chr13:56270285-56270423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
460-595
               

               
Cow position:
               
chr13:56281187-56281049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 87
               
Show alignments to all cow chromosomes.