Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-394
Cow position: chr19:33932586-33932190 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 144, 56

Conread position: 1-593
Cow position: chr19:33280929-33281488 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 44

Conread position: 1-602
Cow position: chr19:267903-268532 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 399
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 144, 71

Conread position: 5-388
Cow position: chr19:55421921-55422322 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 15

Conread position: 5-492
Cow position: chr19:20661854-20661361 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 327
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 141, 45

Conread position: 5-601
Cow position: chr19:2771456-2770852 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 209

Conread position: 6-279
Cow position: chr19:35305595-35305312 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 53

Conread position: 6-287
Cow position: chr19:33641995-33642286 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 87

Conread position: 6-393
Cow position: chr19:10786796-10786411 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 136, 50

Conread position: 6-402
Cow position: chr19:2138529-2138138 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 45

Conread position: 6-403
Cow position: chr19:8033301-8033715 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 138, 50

Conread position: 6-406
Cow position: chr19:38392361-38392773 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 54

Conread position: 6-459
Cow position: chr19:46918397-46918871 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 313
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 107

Conread position: 6-484
Cow position: chr19:11171660-11171170 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 316
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 56

Conread position: 6-488
Cow position: chr19:730168-729696 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 44

Conread position: 6-491
Cow position: chr19:4446055-4445568 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 332
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 136, 44

Conread position: 6-491
Cow position: chr19:31825469-31824960 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 306

Conread position: 6-495
Cow position: chr19:5656547-5656066 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 136, 49

Conread position: 6-496
Cow position: chr19:31396334-31395839 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 296

Conread position: 6-505
Cow position: chr19:426670-426201 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 321
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 42

Conread position: 6-509
Cow position: chr19:7542986-7543487 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 347
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 136, 27

Conread position: 6-510
Cow position: chr19:47109582-47110114 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 354
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 123

Conread position: 6-522
Cow position: chr19:20671342-20670818 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 363
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 53

Conread position: 6-569
Cow position: chr19:21198688-21199275 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 51

Conread position: 6-570
Cow position: chr19:12697889-12698453 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 45

Conread position: 6-589
Cow position: chr19:9582868-9583448 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 51

Conread position: 6-599
Cow position: chr19:48478522-48479138 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 26

Conread position: 6-600
Cow position: chr19:30551609-30552170 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 397
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 37

Conread position: 6-600
Cow position: chr19:42694574-42695172 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 56

Conread position: 6-605
Cow position: chr19:39577007-39576386 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 405
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 136, 56

Conread position: 7-458
Cow position: chr19:23222207-23222653 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 294
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 47

Conread position: 7-535
Cow position: chr19:25711775-25711224 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 378
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 135, 34

Conread position: 7-558
Cow position: chr19:2821135-2821705 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 352

Conread position: 10-287
Cow position: chr19:9069076-9068786 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 50

Conread position: 10-318
Cow position: chr19:36078646-36078323 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 61

Conread position: 10-443
Cow position: chr19:6556510-6556957 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 335

Conread position: 10-504
Cow position: chr19:18786758-18786255 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 341
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 33

Conread position: 10-567
Cow position: chr19:3084640-3084078 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 69

Conread position: 10-579
Cow position: chr19:24688849-24689424 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 119

Conread position: 12-292
Cow position: chr19:12907293-12906996 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 48

Conread position: 12-381
Cow position: chr19:25637928-25637551 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 185, 33

Conread position: 12-389
Cow position: chr19:48409079-48409464 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 52, 64

Conread position: 12-491
Cow position: chr19:14253203-14253685 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 330
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 130, 31

Conread position: 12-511
Cow position: chr19:42647497-42647001 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 7

Conread position: 12-598
Cow position: chr19:27347085-27346501 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 260

Conread position: 12-600
Cow position: chr19:21285536-21284916 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 421

Conread position: 13-589
Cow position: chr19:53737897-53738487 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 265

Conread position: 14-535
Cow position: chr19:35782549-35782041 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 32-583
Cow position: chr19:31826684-31827237 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 236

Conread position: 41-600
Cow position: chr19:38907756-38907197 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 63

Conread position: 42-601
Cow position: chr19:7029530-7030083 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 43-518
Cow position: chr19:42205523-42206007 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 330
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 210

Conread position: 45-458
Cow position: chr19:14929078-14928636 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 39, 300

Conread position: 45-491
Cow position: chr19:25054076-25053611 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 307
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 95

Conread position: 45-511
Cow position: chr19:2734049-2734524 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 6

Conread position: 48-312
Cow position: chr19:2065825-2066106 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 167

Conread position: 48-488
Cow position: chr19:15437707-15438152 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 306
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 9

Conread position: 50-459
Cow position: chr19:8839198-8839628 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 234

Conread position: 50-510
Cow position: chr19:6688405-6687930 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 282

Conread position: 51-417
Cow position: chr19:33306702-33307078 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 15

Conread position: 51-471
Cow position: chr19:30746003-30746441 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 225

Conread position: 51-510
Cow position: chr19:22765219-22765694 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 312
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 91, 70

Conread position: 51-541
Cow position: chr19:35380943-35380450 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 51-547
Cow position: chr19:2589117-2589610 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 335
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 23

Conread position: 51-599
Cow position: chr19:35539907-35540465 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 51-600
Cow position: chr19:36977314-36976747 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 52-300
Cow position: chr19:1294797-1295055 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 5

Conread position: 52-300
Cow position: chr19:4279369-4279632 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 5

Conread position: 63-491
Cow position: chr19:4195342-4195768 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 224

Conread position: 65-510
Cow position: chr19:51401395-51400941 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 299
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 266

Conread position: 66-478
Cow position: chr19:18788485-18788069 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 98

Conread position: 66-491
Cow position: chr19:38842929-38842506 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 286
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 78, 69

Conread position: 74-452
Cow position: chr19:8212218-8211822 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 256
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 69, 338

Conread position: 74-510
Cow position: chr19:17274091-17273667 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 9

Conread position: 77-456
Cow position: chr19:2260504-2260111 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 266

Conread position: 79-408
Cow position: chr19:5934800-5934477 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 161

Conread position: 82-600
Cow position: chr19:19246412-19246934 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 139

Conread position: 86-590
Cow position: chr19:19673055-19673563 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 141

Conread position: 96-508
Cow position: chr19:14592700-14593127 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 230

Conread position: 104-510
Cow position: chr19:6515915-6516340 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 292
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 174

Conread position: 104-510
Cow position: chr19:31594953-31595374 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 282
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 175

Conread position: 104-510
Cow position: chr19:38340317-38339911 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 171

Conread position: 105-593
Cow position: chr19:36461874-36461371 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 176

Conread position: 109-491
Cow position: chr19:23403991-23403591 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 282

Conread position: 109-599
Cow position: chr19:56063769-56063260 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 330
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 162

Conread position: 119-394
Cow position: chr19:32955559-32955846 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 149

Conread position: 119-491
Cow position: chr19:39245569-39245953 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 134

Conread position: 121-456
Cow position: chr19:28921503-28921845 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 122-492
Cow position: chr19:6610326-6609943 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 243
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 294

Conread position: 126-600
Cow position: chr19:2577252-2577743 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 326
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 128

Conread position: 127-491
Cow position: chr19:33912955-33912571 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 133

Conread position: 128-458
Cow position: chr19:18242727-18242404 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 36

Conread position: 131-594
Cow position: chr19:33882469-33882030 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 316
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 33

Conread position: 140-535
Cow position: chr19:16694352-16693930 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 277
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 115

Conread position: 141-491
Cow position: chr19:26086889-26087248 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 93

Conread position: 141-491
Cow position: chr19:35741851-35742215 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 181

Conread position: 141-510
Cow position: chr19:6417294-6417682 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 257
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 108

Conread position: 142-492
Cow position: chr19:39104311-39103958 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 42

Conread position: 142-545
Cow position: chr19:4502921-4503331 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 22

Conread position: 150-566
Cow position: chr19:20622368-20622785 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 271
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 117

Conread position: 152-588
Cow position: chr19:21335904-21335441 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 298
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 319

Conread position: 153-594
Cow position: chr19:20935463-20935930 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 311
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 112

Conread position: 153-600
Cow position: chr19:40449742-40450185 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 11

Conread position: 155-567
Cow position: chr19:40051674-40051259 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 273
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 66

Conread position: 156-593
Cow position: chr19:55236205-55236643 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 159-535
Cow position: chr19:19919741-19919361 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 6

Conread position: 159-600
Cow position: chr19:36379964-36380387 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 5

Conread position: 160-460
Cow position: chr19:33306018-33306333 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 5, 256

Conread position: 161-600
Cow position: chr19:9387351-9387799 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 164-605
Cow position: chr19:1152944-1153376 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 107

Conread position: 166-535
Cow position: chr19:9704108-9703740 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 107

Conread position: 166-566
Cow position: chr19:35064462-35064060 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 167-491
Cow position: chr19:15887599-15887267 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 79

Conread position: 169-510
Cow position: chr19:19661767-19662116 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Conread position: 174-492
Cow position: chr19:10213401-10213726 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 207
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 101

Conread position: 174-506
Cow position: chr19:41212322-41211990 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 98

Conread position: 180-521
Cow position: chr19:19924860-19924518 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 240

Conread position: 180-600
Cow position: chr19:5648915-5648507 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 197-599
Cow position: chr19:6531652-6532056 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 66

Conread position: 199-490
Cow position: chr19:33823080-33823371 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 36

Conread position: 200-535
Cow position: chr19:30886157-30886496 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 125

Conread position: 206-518
Cow position: chr19:44489862-44490175 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 18

Conread position: 206-595
Cow position: chr19:904752-905125 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 206-595
Cow position: chr19:22863892-22863510 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 167

Conread position: 208-556
Cow position: chr19:6881107-6880755 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 211

Conread position: 210-496
Cow position: chr19:36478670-36478954 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 54

Conread position: 211-489
Cow position: chr19:44366802-44367074 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 204, 52

Conread position: 211-589
Cow position: chr19:1713368-1712987 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 50

Conread position: 211-600
Cow position: chr19:31381222-31380842 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 149

Conread position: 213-600
Cow position: chr19:2342254-2342641 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 191

Conread position: 227-509
Cow position: chr19:24137049-24137334 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 99

Conread position: 227-535
Cow position: chr19:25769452-25769772 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 97

Conread position: 227-600
Cow position: chr19:33685890-33686248 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 188, 38

Conread position: 227-600
Cow position: chr19:43726936-43727297 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 24

Conread position: 227-605
Cow position: chr19:20292296-20291923 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 62

Conread position: 230-599
Cow position: chr19:31613905-31614272 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 113

Conread position: 234-605
Cow position: chr19:15936635-15937000 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 236-563
Cow position: chr19:7839244-7838920 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 114

Conread position: 237-535
Cow position: chr19:35233852-35233559 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 10

Conread position: 239-601
Cow position: chr19:35344740-35345093 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 42

Conread position: 240-502
Cow position: chr19:30452970-30452704 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 186

Conread position: 244-535
Cow position: chr19:22168322-22168609 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 151

Conread position: 251-566
Cow position: chr19:43660-43973 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 143

Conread position: 251-601
Cow position: chr19:33290297-33290646 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 76

Conread position: 252-497
Cow position: chr19:47479806-47479567 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 100

Conread position: 252-601
Cow position: chr19:11876891-11876537 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 103

Conread position: 255-602
Cow position: chr19:32214616-32214963 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 150

Conread position: 266-535
Cow position: chr19:1402981-1402711 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 140

Conread position: 266-600
Cow position: chr19:25271590-25271254 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 161

Conread position: 271-530
Cow position: chr19:7404544-7404280 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 12

Conread position: 271-535
Cow position: chr19:33260859-33261122 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 103

Conread position: 286-502
Cow position: chr19:42273998-42273785 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 103

Conread position: 286-510
Cow position: chr19:46094790-46094563 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 286-587
Cow position: chr19:9408533-9408831 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 108

Conread position: 287-594
Cow position: chr19:4825123-4824823 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 72

Conread position: 306-440
Cow position: chr19:15840435-15840570 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 308-510
Cow position: chr19:16110324-16110115 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 15

Conread position: 308-600
Cow position: chr19:40027060-40026769 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 15

Conread position: 312-600
Cow position: chr19:28842496-28842195 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 242

Conread position: 325-595
Cow position: chr19:6735342-6735066 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 78

Conread position: 326-605
Cow position: chr19:24721569-24721845 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 9

Conread position: 332-600
Cow position: chr19:31126690-31126962 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 213

Conread position: 333-600
Cow position: chr19:10971197-10970925 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 14

Conread position: 337-577
Cow position: chr19:2221177-2220934 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 70

Conread position: 342-583
Cow position: chr19:50658058-50658286 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 158, 57

Conread position: 347-594
Cow position: chr19:31984740-31984491 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 68, 195

Conread position: 350-600
Cow position: chr19:952607-952853 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 49

Conread position: 358-510
Cow position: chr19:10207531-10207682 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 50

Conread position: 362-600
Cow position: chr19:12040549-12040783 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 129, 18

Conread position: 374-600
Cow position: chr19:17020217-17020444 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 169

Conread position: 374-600
Cow position: chr19:38871004-38871233 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 380-569
Cow position: chr19:3080404-3080601 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 22

Conread position: 387-600
Cow position: chr19:30935823-30935605 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 152

Conread position: 402-588
Cow position: chr19:14254762-14254580 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 5

Conread position: 411-594
Cow position: chr19:9092836-9092653 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 127

Conread position: 414-600
Cow position: chr19:26003639-26003449 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 79, 131

Conread position: 415-600
Cow position: chr19:2280662-2280482 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 96, 31

Conread position: 422-600
Cow position: chr19:22932564-22932384 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 121

Conread position: 427-560
Cow position: chr19:47771621-47771754 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 76

Conread position: 427-599
Cow position: chr19:47783776-47783599 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 118

Conread position: 427-600
Cow position: chr19:46497927-46498093 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 113

Conread position: 434-588
Cow position: chr19:5986231-5986388 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 110

Conread position: 434-593
Cow position: chr19:38025689-38025850 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 109

Conread position: 442-600
Cow position: chr19:50786531-50786376 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 12

Conread position: 447-574
Cow position: chr19:46306328-46306202 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 96

Conread position: 447-600
Cow position: chr19:11759220-11759064 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 103

Conread position: 463-600
Cow position: chr19:38708176-38708318 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 464-601
Cow position: chr19:39223083-39222945 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 79

Show alignments to all cow chromosomes.