Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-454
Cow position:
Alignm length: 473
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 141, 61

Conread position: 5-569
Cow position:
Alignm length: 595
Alignm identity: 379
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 133, 57

Conread position: 6-287
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 40

Conread position: 6-340
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 83

Conread position: 6-399
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 129, 300

Conread position: 6-430
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 8

Conread position: 6-491
Cow position:
Alignm length: 501
Alignm identity: 314
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 56

Conread position: 6-510
Cow position:
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 6-510
Cow position:
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 6-577
Cow position:
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 39

Conread position: 6-588
Cow position:
Alignm length: 595
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 35

Conread position: 6-589
Cow position:
Alignm length: 612
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 34

Conread position: 6-600
Cow position:
Alignm length: 621
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 127

Conread position: 6-600
Cow position:
Alignm length: 616
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 50

Conread position: 6-600
Cow position:
Alignm length: 620
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 38

Conread position: 6-600
Cow position:
Alignm length: 631
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 287

Conread position: 6-600
Cow position:
Alignm length: 627
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 6-602
Cow position:
Alignm length: 617
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 47

Conread position: 7-362
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 163

Conread position: 7-563
Cow position:
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 7-605
Cow position:
Alignm length: 622
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 269

Conread position: 10-279
Cow position:
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 18

Conread position: 10-461
Cow position:
Alignm length: 476
Alignm identity: 316
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 132, 41

Conread position: 10-574
Cow position:
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 12-320
Cow position:
Alignm length: 324
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 46

Conread position: 12-573
Cow position:
Alignm length: 579
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 33

Conread position: 12-601
Cow position:
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 129

Conread position: 12-605
Cow position:
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 13-589
Cow position:
Alignm length: 606
Alignm identity: 390
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 129, 30

Conread position: 18-569
Cow position:
Alignm length: 575
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 258

Conread position: 27-517
Cow position:
Alignm length: 503
Alignm identity: 318
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 37

Conread position: 45-457
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 50

Conread position: 50-427
Cow position:
Alignm length: 396
Alignm identity: 258
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 110, 92

Conread position: 50-442
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 92, 7

Conread position: 50-493
Cow position:
Alignm length: 468
Alignm identity: 315
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 226

Conread position: 50-510
Cow position:
Alignm length: 475
Alignm identity: 307
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 7

Conread position: 51-604
Cow position:
Alignm length: 598
Alignm identity: 392
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 81

Conread position: 52-602
Cow position:
Alignm length: 568
Alignm identity: 354
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 228, 93

Conread position: 56-581
Cow position:
Alignm length: 555
Alignm identity: 357
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 21

Conread position: 60-392
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 220

Conread position: 60-600
Cow position:
Alignm length: 573
Alignm identity: 363
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 27

Conread position: 65-279
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 150

Conread position: 66-462
Cow position:
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 9

Conread position: 66-491
Cow position:
Alignm length: 445
Alignm identity: 287
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 186

Conread position: 70-407
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 186

Conread position: 74-495
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 52

Conread position: 74-535
Cow position:
Alignm length: 483
Alignm identity: 299
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 42

Conread position: 75-491
Cow position:
Alignm length: 438
Alignm identity: 279
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 329

Conread position: 76-600
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 177

Conread position: 104-510
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 174

Conread position: 108-578
Cow position:
Alignm length: 491
Alignm identity: 325
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 230

Conread position: 108-593
Cow position:
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 244

Conread position: 109-491
Cow position:
Alignm length: 412
Alignm identity: 269
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 182

Conread position: 110-468
Cow position:
Alignm length: 373
Alignm identity: 244
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 123

Conread position: 118-485
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 85

Conread position: 119-392
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 119-600
Cow position:
Alignm length: 500
Alignm identity: 313
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 131

Conread position: 126-542
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 213

Conread position: 139-397
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 223

Conread position: 143-600
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 156-314
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 156-491
Cow position:
Alignm length: 348
Alignm identity: 223
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 8

Conread position: 162-474
Cow position:
Alignm length: 323
Alignm identity: 207
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 67

Conread position: 162-605
Cow position:
Alignm length: 468
Alignm identity: 294
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 121

Conread position: 164-560
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 5

Conread position: 165-592
Cow position:
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 197

Conread position: 169-467
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 154, 26

Conread position: 169-535
Cow position:
Alignm length: 381
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 101

Conread position: 170-579
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 112, 45

Conread position: 174-519
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 7

Conread position: 174-605
Cow position:
Alignm length: 445
Alignm identity: 290
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 95

Conread position: 180-491
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 51

Conread position: 185-600
Cow position:
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 187-592
Cow position:
Alignm length: 417
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 30

Conread position: 195-593
Cow position:
Alignm length: 422
Alignm identity: 265
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 117

Conread position: 199-544
Cow position:
Alignm length: 354
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 204

Conread position: 199-600
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 64

Conread position: 200-442
Cow position:
Alignm length: 249
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 217

Conread position: 200-448
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 123

Conread position: 200-591
Cow position:
Alignm length: 417
Alignm identity: 272
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 211

Conread position: 200-599
Cow position:
Alignm length: 429
Alignm identity: 275
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 206-475
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 39

Conread position: 211-535
Cow position:
Alignm length: 334
Alignm identity: 214
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 43

Conread position: 211-594
Cow position:
Alignm length: 389
Alignm identity: 258
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 48

Conread position: 214-600
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 50

Conread position: 225-592
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 29

Conread position: 225-599
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 109, 61

Conread position: 227-510
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 56

Conread position: 229-492
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 162

Conread position: 229-594
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 263, 31

Conread position: 229-599
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 174

Conread position: 238-456
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 240-510
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 87

Conread position: 241-600
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 181, 6

Conread position: 245-470
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 149

Conread position: 246-600
Cow position:
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 251-535
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 175

Conread position: 262-586
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 157, 32

Conread position: 267-594
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 75

Conread position: 285-604
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 99

Conread position: 286-600
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 243

Conread position: 287-601
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 288-586
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 112

Conread position: 300-526
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 303-599
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 305-589
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 48

Conread position: 313-600
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 61

Conread position: 324-593
Cow position:
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 326-541
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 327-594
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 74

Conread position: 332-535
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 336-600
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 57

Conread position: 337-523
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 9

Conread position: 337-589
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 170, 129

Conread position: 343-573
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 61

Conread position: 354-605
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 154, 18

Conread position: 370-600
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 67

Conread position: 378-600
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 49

Conread position: 384-594
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 11

Conread position: 385-581
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 14

Conread position: 395-600
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 92

Conread position: 396-592
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 31

Conread position: 397-600
Cow position:
Alignm length: 205
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 398-574
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 6

Conread position: 410-599
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 134

Conread position: 424-600
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 22

Conread position: 427-592
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 121

Conread position: 443-600
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 446-605
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 449-598
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 58, 93

Conread position: 451-592
Cow position:
Alignm length: 142
Alignm identity: 117
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 454-603
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 93

Conread position: 455-589
Cow position:
Alignm length: 137
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 15

Show alignments to all cow chromosomes.