Cow genome map
| Conread name: | Emb1-C0005191_K10 |
| Conread position: | 5-594 |
| Cow position: | chr27:22034995-22035603 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 393 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 5-600 |
| Cow position: | chr27:8430037-8430658 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 342 |
| Conread position: | 6-279 |
| Cow position: | chr27:15632783-15632502 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 6-283 |
| Cow position: | chr27:25985348-25985635 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 129 |
| Conread position: | 6-311 |
| Cow position: | chr27:23511502-23511193 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 136, 56 |
| Conread position: | 6-378 |
| Cow position: | chr27:16620369-16619991 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 6-398 |
| Cow position: | chr27:23454767-23455172 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 6-408 |
| Cow position: | chr27:12231528-12231938 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 44 |
| Conread position: | 6-457 |
| Cow position: | chr27:27040979-27040528 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 182, 45 |
| Conread position: | 6-491 |
| Cow position: | chr27:9090412-9090898 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 345 |
| Conread position: | 6-491 |
| Cow position: | chr27:15871544-15871053 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 334 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 136, 28 |
| Conread position: | 6-491 |
| Cow position: | chr27:16787216-16786721 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 328 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 6-508 |
| Cow position: | chr27:23472636-23472133 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 336 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 156, 54 |
| Conread position: | 6-510 |
| Cow position: | chr27:1353980-1353455 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 355 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 6-510 |
| Cow position: | chr27:8061982-8062478 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 339 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 6-522 |
| Cow position: | chr27:27064062-27064582 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 342 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 137, 35 |
| Conread position: | 6-545 |
| Cow position: | chr27:12277894-12278415 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 136, 38 |
| Conread position: | 6-595 |
| Cow position: | chr27:21393124-21393726 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 6-599 |
| Cow position: | chr27:6454603-6453990 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 420 |
| Conread position: | 6-599 |
| Cow position: | chr27:23128835-23128228 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 136, 45 |
| Conread position: | 6-600 |
| Cow position: | chr27:491285-490685 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 6-600 |
| Cow position: | chr27:26300224-26299627 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 158 |
| Conread position: | 6-602 |
| Cow position: | chr27:1636567-1637165 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 395 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 138, 39 |
| Conread position: | 6-602 |
| Cow position: | chr27:10992750-10992134 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 416 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 56 |
| Conread position: | 7-279 |
| Cow position: | chr27:26945272-26944999 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 181, 125 |
| Conread position: | 7-287 |
| Cow position: | chr27:13977011-13977298 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 7-312 |
| Cow position: | chr27:26598257-26597942 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 55 |
| Conread position: | 7-318 |
| Cow position: | chr27:18954823-18955137 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 7-319 |
| Cow position: | chr27:191095-190772 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 7-504 |
| Cow position: | chr27:4664858-4664366 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 7-532 |
| Cow position: | chr27:11434949-11435473 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 7-541 |
| Cow position: | chr27:22418385-22418928 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 358 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 7-600 |
| Cow position: | chr27:17397072-17397689 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 406 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 10-355 |
| Cow position: | chr27:30783707-30784066 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 132, 153 |
| Conread position: | 10-495 |
| Cow position: | chr27:1123401-1122919 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 10-541 |
| Cow position: | chr27:14670002-14670544 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 10-599 |
| Cow position: | chr27:19543539-19544138 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 10-600 |
| Cow position: | chr27:27049539-27050124 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 19 |
| Conread position: | 10-601 |
| Cow position: | chr27:30447566-30446956 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 12-491 |
| Cow position: | chr27:19522915-19522426 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 327 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 12-533 |
| Cow position: | chr27:2639632-2640129 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 39 |
| Conread position: | 14-535 |
| Cow position: | chr27:13410984-13411524 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 358 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 16-491 |
| Cow position: | chr27:15454584-15454103 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 42-595 |
| Cow position: | chr27:26161858-26161290 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 244 |
| Conread position: | 50-382 |
| Cow position: | chr27:13198250-13197919 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 50-406 |
| Cow position: | chr27:16238241-16237886 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 51-536 |
| Cow position: | chr27:25885621-25886088 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 238, 99 |
| Conread position: | 52-490 |
| Cow position: | chr27:22426485-22426939 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 248 |
| Conread position: | 52-510 |
| Cow position: | chr27:26427784-26428260 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 199 |
| Conread position: | 55-535 |
| Cow position: | chr27:30561256-30560770 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 227 |
| Conread position: | 57-382 |
| Cow position: | chr27:26397931-26398259 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 60-469 |
| Cow position: | chr27:23070028-23070445 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 66-484 |
| Cow position: | chr27:21350686-21351122 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 368 |
| Conread position: | 66-491 |
| Cow position: | chr27:15272235-15271812 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 165 |
| Conread position: | 66-492 |
| Cow position: | chr27:21408222-21408672 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 66-600 |
| Cow position: | chr27:8961940-8962479 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 368 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 73, 192 |
| Conread position: | 66-600 |
| Cow position: | chr27:25982387-25982937 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 69-491 |
| Cow position: | chr27:30868414-30868848 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 280 |
| Conread position: | 70-491 |
| Cow position: | chr27:4673340-4672905 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 80 |
| Conread position: | 70-535 |
| Cow position: | chr27:4385743-4386217 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 77-321 |
| Cow position: | chr27:16099700-16099965 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 77-602 |
| Cow position: | chr27:18544316-18543749 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 383 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 218 |
| Conread position: | 87-427 |
| Cow position: | chr27:13860437-13860782 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 100-510 |
| Cow position: | chr27:29831393-29831825 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 104-491 |
| Cow position: | chr27:29977546-29977143 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 253 |
| Conread position: | 107-510 |
| Cow position: | chr27:28931501-28931929 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 320 |
| Conread position: | 107-535 |
| Cow position: | chr27:28921619-28922048 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 108-399 |
| Cow position: | chr27:23882078-23882396 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 108-541 |
| Cow position: | chr27:19589762-19589312 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 108-601 |
| Cow position: | chr27:6541905-6541396 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 339 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 110-474 |
| Cow position: | chr27:30362528-30362156 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 225 |
| Conread position: | 110-544 |
| Cow position: | chr27:26412973-26413418 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 32, 181 |
| Conread position: | 113-454 |
| Cow position: | chr27:16580900-16580546 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 327 |
| Conread position: | 113-511 |
| Cow position: | chr27:22723431-22723822 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 114-491 |
| Cow position: | chr27:28518558-28518188 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 117-561 |
| Cow position: | chr27:21139103-21138650 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 123-491 |
| Cow position: | chr27:12429684-12429299 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 265 |
| Conread position: | 123-605 |
| Cow position: | chr27:26492432-26492920 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 331 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 129-535 |
| Cow position: | chr27:6550717-6550308 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 131-603 |
| Cow position: | chr27:2957668-2957176 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 139-554 |
| Cow position: | chr27:24331982-24331550 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 216 |
| Conread position: | 141-582 |
| Cow position: | chr27:27234271-27233818 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 337 |
| Conread position: | 141-600 |
| Cow position: | chr27:23930215-23929740 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 146-599 |
| Cow position: | chr27:13006077-13005631 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 150-554 |
| Cow position: | chr27:10980106-10979686 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 188 |
| Conread position: | 153-565 |
| Cow position: | chr27:4390021-4390441 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 155-521 |
| Cow position: | chr27:26935684-26936030 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 156-491 |
| Cow position: | chr27:6500298-6499953 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 282 |
| Conread position: | 156-594 |
| Cow position: | chr27:26440825-26441261 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 164-593 |
| Cow position: | chr27:16493780-16493374 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 166-405 |
| Cow position: | chr27:6620369-6620120 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 166-600 |
| Cow position: | chr27:31251104-31251533 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 162 |
| Conread position: | 169-600 |
| Cow position: | chr27:8048519-8048950 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 183 |
| Conread position: | 170-546 |
| Cow position: | chr27:30354126-30354511 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 174-417 |
| Cow position: | chr27:19637849-19637606 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 195-494 |
| Cow position: | chr27:25471327-25471028 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 5, 130 |
| Conread position: | 195-578 |
| Cow position: | chr27:21182022-21181648 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 199-510 |
| Cow position: | chr27:30988980-30988670 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 131, 123 |
| Conread position: | 200-565 |
| Cow position: | chr27:19685532-19685894 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 200-590 |
| Cow position: | chr27:19661123-19660723 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 200-591 |
| Cow position: | chr27:13252191-13251798 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 176 |
| Conread position: | 200-600 |
| Cow position: | chr27:24342086-24341683 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 206-412 |
| Cow position: | chr27:6037298-6037092 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 112, 59 |
| Conread position: | 206-535 |
| Cow position: | chr27:29019573-29019889 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 188 |
| Conread position: | 206-551 |
| Cow position: | chr27:27053472-27053125 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 83, 118 |
| Conread position: | 206-600 |
| Cow position: | chr27:20765788-20766172 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 206-600 |
| Cow position: | chr27:24224732-24225115 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 59 |
| Conread position: | 206-600 |
| Cow position: | chr27:25998880-25998487 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 122 |
| Conread position: | 206-602 |
| Cow position: | chr27:14937253-14937649 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 212-600 |
| Cow position: | chr27:6160151-6159769 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 214-510 |
| Cow position: | chr27:23600433-23600145 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 227-600 |
| Cow position: | chr27:29038790-29039159 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 230-600 |
| Cow position: | chr27:19601528-19601156 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 240-600 |
| Cow position: | chr27:12243994-12244345 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 241-389 |
| Cow position: | chr27:18948450-18948604 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 241-496 |
| Cow position: | chr27:1141886-1142151 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 251-599 |
| Cow position: | chr27:4858518-4858855 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 252-601 |
| Cow position: | chr27:23662475-23662813 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 258-503 |
| Cow position: | chr27:23891065-23890817 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 258-583 |
| Cow position: | chr27:20037001-20037320 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 263-526 |
| Cow position: | chr27:12424804-12425059 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 271-555 |
| Cow position: | chr27:11416563-11416277 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 273-600 |
| Cow position: | chr27:20748902-20749240 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 283-597 |
| Cow position: | chr27:30365410-30365102 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 287-575 |
| Cow position: | chr27:21681241-21681519 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 300-600 |
| Cow position: | chr27:25970474-25970188 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 306-599 |
| Cow position: | chr27:783776-783488 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 308-599 |
| Cow position: | chr27:11356468-11356749 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 308-600 |
| Cow position: | chr27:13958266-13958562 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 309-605 |
| Cow position: | chr27:24509891-24509601 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 310-600 |
| Cow position: | chr27:19083645-19083936 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 313-600 |
| Cow position: | chr27:2847921-2847635 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 324-601 |
| Cow position: | chr27:2354717-2354982 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 326-600 |
| Cow position: | chr27:22108157-22108425 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 329-559 |
| Cow position: | chr27:6884073-6883855 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 331-600 |
| Cow position: | chr27:15523752-15524026 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 176, 26 |
| Conread position: | 332-600 |
| Cow position: | chr27:30811500-30811237 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 333-601 |
| Cow position: | chr27:22225547-22225807 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 335-600 |
| Cow position: | chr27:1536671-1536946 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 219 |
| Conread position: | 340-535 |
| Cow position: | chr27:27841864-27842062 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 341-511 |
| Cow position: | chr27:19869869-19869702 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 370-548 |
| Cow position: | chr27:22782057-22781879 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 370-605 |
| Cow position: | chr27:13970376-13970602 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 378-566 |
| Cow position: | chr27:13977539-13977731 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 384-600 |
| Cow position: | chr27:21578578-21578794 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 416-599 |
| Cow position: | chr27:25880068-25879884 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 418-600 |
| Cow position: | chr27:16525880-16526060 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 424-586 |
| Cow position: | chr27:11746547-11746383 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 88, 116 |
| Conread position: | 440-593 |
| Cow position: | chr27:17875199-17875354 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 450-600 |
| Cow position: | chr27:1675082-1674930 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 453-600 |
| Cow position: | chr27:1899642-1899790 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 455-561 |
| Cow position: | chr27:18219325-18219217 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 455-605 |
| Cow position: | chr27:6347823-6347975 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 459-589 |
| Cow position: | chr27:6037095-6036962 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 459-600 |
| Cow position: | chr27:493053-492918 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 81 |
Show alignments to all cow chromosomes.