Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-283
Cow position: chr3:16716135-16715839 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 59

Conread position: 1-491
Cow position: chr3:25690338-25690833 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 42

Conread position: 1-492
Cow position: chr3:33698270-33698772 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 337
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 141, 49

Conread position: 1-492
Cow position: chr3:72390628-72391123 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 333
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 141, 59

Conread position: 1-574
Cow position: chr3:15655607-15655020 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 172

Conread position: 1-590
Cow position: chr3:2506934-2506339 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 1-590
Cow position: chr3:34270480-34271059 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 390
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 144, 21

Conread position: 2-586
Cow position: chr3:53588853-53588247 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 264

Conread position: 2-600
Cow position: chr3:12255020-12255623 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 240

Conread position: 5-405
Cow position: chr3:42603371-42603785 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 354

Conread position: 6-287
Cow position: chr3:81374533-81374245 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 40

Conread position: 6-306
Cow position: chr3:2334835-2335143 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 136, 50

Conread position: 6-312
Cow position: chr3:60054528-60054845 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 138, 33

Conread position: 6-316
Cow position: chr3:40231479-40231800 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 157, 66

Conread position: 6-319
Cow position: chr3:41315832-41316157 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 59

Conread position: 6-337
Cow position: chr3:15746884-15746567 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 136, 60

Conread position: 6-355
Cow position: chr3:24276268-24276616 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 130

Conread position: 6-360
Cow position: chr3:14717358-14717722 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 203

Conread position: 6-381
Cow position: chr3:82473589-82473991 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 89

Conread position: 6-389
Cow position: chr3:22872500-22872106 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 37

Conread position: 6-399
Cow position: chr3:27544789-27544382 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 6-401
Cow position: chr3:44535210-44534807 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 136, 44

Conread position: 6-405
Cow position: chr3:79208438-79208041 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 37

Conread position: 6-456
Cow position: chr3:54959749-54960194 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 299
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 178, 37

Conread position: 6-458
Cow position: chr3:3301676-3302136 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 304
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 33

Conread position: 6-458
Cow position: chr3:8753007-8753467 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 335

Conread position: 6-461
Cow position: chr3:77226866-77227337 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 330

Conread position: 6-467
Cow position: chr3:67165484-67165935 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 146

Conread position: 6-478
Cow position: chr3:72530728-72531200 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 320
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 57, 52

Conread position: 6-491
Cow position: chr3:15954526-15954045 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 321
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 136, 34

Conread position: 6-491
Cow position: chr3:26219510-26219011 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 330
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 14

Conread position: 6-491
Cow position: chr3:60932982-60933457 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 309
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 136, 42

Conread position: 6-491
Cow position: chr3:61539347-61539841 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 327
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 136, 54

Conread position: 6-491
Cow position: chr3:79592338-79591851 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 338
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 44

Conread position: 6-491
Cow position: chr3:79902053-79902536 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 328
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 136, 40

Conread position: 6-492
Cow position: chr3:66610288-66609803 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 47

Conread position: 6-493
Cow position: chr3:46226033-46226498 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 90

Conread position: 6-498
Cow position: chr3:18184624-18185122 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 333
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 44

Conread position: 6-510
Cow position: chr3:57577250-57577757 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 340
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 33

Conread position: 6-510
Cow position: chr3:58540989-58540462 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 347
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 21

Conread position: 6-510
Cow position: chr3:72131752-72131238 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 368
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 38

Conread position: 6-510
Cow position: chr3:73708604-73709107 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 77

Conread position: 6-520
Cow position: chr3:42489771-42489228 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 352
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 120

Conread position: 6-520
Cow position: chr3:58206912-58206377 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 346
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 71, 297

Conread position: 6-520
Cow position: chr3:60174931-60174413 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 348
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 55

Conread position: 6-521
Cow position: chr3:15685356-15684848 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 48

Conread position: 6-530
Cow position: chr3:59630956-59630430 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 6-535
Cow position: chr3:58350127-58350660 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 381
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 39

Conread position: 6-535
Cow position: chr3:74561852-74561336 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 165

Conread position: 6-536
Cow position: chr3:80053989-80053454 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 102

Conread position: 6-542
Cow position: chr3:49649931-49650482 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 44

Conread position: 6-545
Cow position: chr3:52017310-52017868 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 357
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 137, 44

Conread position: 6-551
Cow position: chr3:51255311-51255882 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 427

Conread position: 6-566
Cow position: chr3:65968705-65969289 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 374
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 155, 108

Conread position: 6-568
Cow position: chr3:53091062-53091602 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 78

Conread position: 6-570
Cow position: chr3:6689545-6690122 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 379
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 136, 43

Conread position: 6-571
Cow position: chr3:26554172-26553599 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 277

Conread position: 6-574
Cow position: chr3:5420325-5419738 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 370

Conread position: 6-574
Cow position: chr3:63147612-63147026 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 44

Conread position: 6-589
Cow position: chr3:4049752-4050340 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 44

Conread position: 6-593
Cow position: chr3:34086514-34085914 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 169

Conread position: 6-600
Cow position: chr3:14552430-14553042 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 43

Conread position: 6-600
Cow position: chr3:15052377-15051782 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 392
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 153, 36

Conread position: 6-600
Cow position: chr3:18459970-18459367 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 53

Conread position: 6-600
Cow position: chr3:50614189-50614793 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 281

Conread position: 6-600
Cow position: chr3:54434523-54435138 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 6-600
Cow position: chr3:68342710-68342109 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 39

Conread position: 6-601
Cow position: chr3:30179633-30180253 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 6-602
Cow position: chr3:4457524-4456925 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 388
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 136, 44

Conread position: 7-431
Cow position: chr3:42461238-42461680 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 278

Conread position: 7-487
Cow position: chr3:66649899-66649404 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 334
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 70, 96

Conread position: 7-510
Cow position: chr3:26669557-26669056 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 143

Conread position: 7-510
Cow position: chr3:31907614-31907084 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 201

Conread position: 7-510
Cow position: chr3:38497486-38497981 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 213

Conread position: 7-530
Cow position: chr3:64011269-64010732 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 7-574
Cow position: chr3:42563000-42563569 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 172

Conread position: 7-595
Cow position: chr3:20471819-20471220 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 67

Conread position: 7-599
Cow position: chr3:64536998-64536419 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 203

Conread position: 7-600
Cow position: chr3:59473666-59474290 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 398
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 135, 17

Conread position: 10-440
Cow position: chr3:41947556-41947148 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 200, 73

Conread position: 10-460
Cow position: chr3:49218754-49218305 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 42

Conread position: 10-491
Cow position: chr3:80564508-80565006 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 256

Conread position: 10-510
Cow position: chr3:11254592-11254108 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 337
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 132, 40

Conread position: 10-510
Cow position: chr3:65413737-65413218 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 51

Conread position: 10-511
Cow position: chr3:70753916-70754419 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 340
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 21

Conread position: 10-538
Cow position: chr3:80581233-80581746 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 357
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 22

Conread position: 10-563
Cow position: chr3:23476556-23477105 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 10-600
Cow position: chr3:37186390-37186978 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 73

Conread position: 11-502
Cow position: chr3:58953849-58954337 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 323
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 131, 63

Conread position: 12-310
Cow position: chr3:26722095-26721783 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 48

Conread position: 12-320
Cow position: chr3:27453839-27453527 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 124

Conread position: 12-394
Cow position: chr3:76188247-76188632 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 130, 73

Conread position: 12-428
Cow position: chr3:43658163-43657728 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 38

Conread position: 12-491
Cow position: chr3:37599860-37599388 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 328
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 130, 39

Conread position: 12-600
Cow position: chr3:48252451-48253049 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 39

Conread position: 12-603
Cow position: chr3:73764623-73764042 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 132

Conread position: 13-279
Cow position: chr3:34115173-34114917 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 188, 47

Conread position: 13-514
Cow position: chr3:44254884-44254372 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 353
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 129, 290

Conread position: 14-510
Cow position: chr3:80740141-80740622 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 328
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 130

Conread position: 14-535
Cow position: chr3:66738324-66738846 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 363

Conread position: 14-594
Cow position: chr3:59608060-59608642 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 15-417
Cow position: chr3:7857912-7858335 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 286
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 31

Conread position: 15-492
Cow position: chr3:80818288-80818758 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 155

Conread position: 26-564
Cow position: chr3:51147101-51146556 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 96

Conread position: 27-495
Cow position: chr3:48296275-48296743 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 326
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 5, 208

Conread position: 27-510
Cow position: chr3:36174510-36174008 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 30-285
Cow position: chr3:51315059-51315319 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 30

Conread position: 31-569
Cow position: chr3:50347567-50348074 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 149

Conread position: 31-600
Cow position: chr3:48370700-48371296 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 59

Conread position: 32-413
Cow position: chr3:19717515-19717128 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 107, 54

Conread position: 35-318
Cow position: chr3:55107534-55107235 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 40

Conread position: 36-600
Cow position: chr3:20803050-20802470 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 386
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 106, 14

Conread position: 39-372
Cow position: chr3:70913502-70913153 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 101, 11

Conread position: 40-402
Cow position: chr3:46683578-46683959 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 18, 286

Conread position: 41-511
Cow position: chr3:50461917-50462397 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 257

Conread position: 45-502
Cow position: chr3:19708513-19708055 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 45-554
Cow position: chr3:12712344-12711808 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 355
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 271

Conread position: 47-522
Cow position: chr3:72675673-72676166 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 49-466
Cow position: chr3:57554259-57553834 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 211

Conread position: 50-394
Cow position: chr3:3164904-3164549 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 7

Conread position: 50-399
Cow position: chr3:27285817-27286182 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 7

Conread position: 50-456
Cow position: chr3:48269449-48269870 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 278
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 296

Conread position: 50-491
Cow position: chr3:29891823-29891369 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 296
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 46

Conread position: 50-503
Cow position: chr3:31047354-31046899 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 193

Conread position: 50-600
Cow position: chr3:26903705-26904269 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 201

Conread position: 50-602
Cow position: chr3:48241210-48241779 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 393
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 12, 7

Conread position: 51-508
Cow position: chr3:49327535-49328002 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 302
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 67

Conread position: 52-461
Cow position: chr3:80082228-80081803 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 227

Conread position: 52-508
Cow position: chr3:53593106-53592633 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 310
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 23

Conread position: 53-495
Cow position: chr3:62827022-62826574 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 298
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 92

Conread position: 66-316
Cow position: chr3:40101067-40100804 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 129

Conread position: 66-396
Cow position: chr3:15662094-15661750 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 76, 209

Conread position: 66-409
Cow position: chr3:75727985-75727623 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 355

Conread position: 66-490
Cow position: chr3:53384679-53384241 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 202

Conread position: 66-535
Cow position: chr3:7338173-7337696 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 314
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 235

Conread position: 67-600
Cow position: chr3:54340804-54340271 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 28

Conread position: 69-498
Cow position: chr3:49382559-49382996 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 284
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 250

Conread position: 69-502
Cow position: chr3:34953261-34953693 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 287
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 73

Conread position: 70-536
Cow position: chr3:38691793-38691317 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 306
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 44

Conread position: 70-574
Cow position: chr3:46094438-46094947 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 25

Conread position: 70-600
Cow position: chr3:42584139-42584689 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 282

Conread position: 71-600
Cow position: chr3:5365294-5365835 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 141

Conread position: 73-490
Cow position: chr3:53573135-53572713 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 282
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 16

Conread position: 75-540
Cow position: chr3:56582460-56582937 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 305
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 57

Conread position: 77-491
Cow position: chr3:11986946-11987369 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 201

Conread position: 80-605
Cow position: chr3:68146206-68145681 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 364
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 82, 133

Conread position: 81-404
Cow position: chr3:35283466-35283135 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 87

Conread position: 81-499
Cow position: chr3:68291188-68291605 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 20

Conread position: 82-396
Cow position: chr3:65771691-65771358 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 60, 13

Conread position: 82-462
Cow position: chr3:18066754-18067150 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 255

Conread position: 83-508
Cow position: chr3:49461316-49460868 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 299
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 328

Conread position: 84-510
Cow position: chr3:12675407-12674983 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 56, 95

Conread position: 86-491
Cow position: chr3:31206497-31206916 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 45

Conread position: 87-413
Cow position: chr3:22021346-22021010 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 245

Conread position: 88-600
Cow position: chr3:28908577-28908046 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 344
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 183

Conread position: 89-585
Cow position: chr3:48211136-48211644 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 96-529
Cow position: chr3:5101126-5100690 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 182

Conread position: 97-491
Cow position: chr3:79884851-79884446 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 265
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 181

Conread position: 97-535
Cow position: chr3:33633251-33632820 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 96

Conread position: 100-535
Cow position: chr3:55970151-55970594 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 61, 30

Conread position: 105-535
Cow position: chr3:68647803-68648261 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 292
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 105-560
Cow position: chr3:53270463-53270936 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 316
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 184

Conread position: 105-594
Cow position: chr3:59101483-59101955 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 26

Conread position: 105-600
Cow position: chr3:83490721-83491250 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 348
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 26

Conread position: 107-573
Cow position: chr3:66708426-66707945 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 108-428
Cow position: chr3:17952302-17952635 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 189

Conread position: 108-536
Cow position: chr3:67544228-67543780 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 286
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 241

Conread position: 108-563
Cow position: chr3:58286249-58285794 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 108-575
Cow position: chr3:36204196-36204679 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 110-428
Cow position: chr3:34316331-34315977 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 332

Conread position: 111-600
Cow position: chr3:65058355-65058869 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 349
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 29

Conread position: 112-510
Cow position: chr3:71497496-71497078 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 228

Conread position: 114-600
Cow position: chr3:56637311-56637803 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 229

Conread position: 119-410
Cow position: chr3:22954192-22953895 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 133

Conread position: 119-518
Cow position: chr3:52722348-52721938 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 164

Conread position: 120-495
Cow position: chr3:80071775-80072174 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 243

Conread position: 120-510
Cow position: chr3:67704200-67704606 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 14

Conread position: 120-566
Cow position: chr3:209980-210437 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 109

Conread position: 121-491
Cow position: chr3:61171843-61171467 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 166

Conread position: 122-535
Cow position: chr3:4222979-4223388 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 39

Conread position: 131-589
Cow position: chr3:64172120-64172581 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 132-535
Cow position: chr3:2216036-2216456 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 270
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 203

Conread position: 137-510
Cow position: chr3:78530220-78530602 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 25

Conread position: 139-487
Cow position: chr3:28898548-28898187 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 140

Conread position: 139-491
Cow position: chr3:54903253-54903604 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 270

Conread position: 139-573
Cow position: chr3:2024864-2025325 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 300
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 156

Conread position: 139-589
Cow position: chr3:77224794-77225252 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 141-526
Cow position: chr3:27546148-27545740 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 62, 87

Conread position: 141-530
Cow position: chr3:17935245-17934855 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 88

Conread position: 141-535
Cow position: chr3:73776955-73777358 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 286
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 283

Conread position: 141-601
Cow position: chr3:64281253-64280767 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 312
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 195

Conread position: 142-510
Cow position: chr3:53112851-53113235 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 195

Conread position: 145-491
Cow position: chr3:72473596-72473955 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 223
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 146-575
Cow position: chr3:8393630-8394065 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 300
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 18

Conread position: 149-405
Cow position: chr3:45307636-45307889 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 21

Conread position: 153-592
Cow position: chr3:52836204-52835737 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 322
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 11

Conread position: 154-502
Cow position: chr3:46135200-46134849 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 10

Conread position: 156-511
Cow position: chr3:46900895-46901259 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 100

Conread position: 159-491
Cow position: chr3:71430503-71430164 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 5

Conread position: 159-599
Cow position: chr3:8752502-8752935 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 159-599
Cow position: chr3:58174613-58175050 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 74

Conread position: 159-600
Cow position: chr3:42480328-42480765 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 5

Conread position: 159-605
Cow position: chr3:26836088-26835673 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 5

Conread position: 162-594
Cow position: chr3:72121-72584 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 304
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 100

Conread position: 164-520
Cow position: chr3:42594948-42594579 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 39

Conread position: 164-601
Cow position: chr3:3985042-3985486 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 297
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 10

Conread position: 164-605
Cow position: chr3:55124570-55124110 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 306
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 58

Conread position: 165-583
Cow position: chr3:49337445-49337871 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 11

Conread position: 165-591
Cow position: chr3:48629877-48629447 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 165-594
Cow position: chr3:41718104-41718535 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 14

Conread position: 166-600
Cow position: chr3:31933392-31932954 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 311
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 126

Conread position: 167-520
Cow position: chr3:57763934-57764291 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 167

Conread position: 167-600
Cow position: chr3:36100539-36100981 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 189

Conread position: 168-535
Cow position: chr3:59205953-59206324 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 227

Conread position: 169-367
Cow position: chr3:55815057-55815257 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 100

Conread position: 169-535
Cow position: chr3:45691152-45690790 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 34

Conread position: 169-599
Cow position: chr3:23111791-23111364 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 169-599
Cow position: chr3:27532949-27532511 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 284

Conread position: 170-394
Cow position: chr3:66116398-66116165 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 103

Conread position: 170-519
Cow position: chr3:18573360-18573014 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 57

Conread position: 170-521
Cow position: chr3:44861594-44861238 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 211

Conread position: 172-569
Cow position: chr3:8457373-8457775 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 172-573
Cow position: chr3:18458940-18458542 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 172-592
Cow position: chr3:29507312-29507725 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 105

Conread position: 174-514
Cow position: chr3:74699677-74699321 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 241

Conread position: 174-526
Cow position: chr3:63203163-63203512 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 100

Conread position: 174-563
Cow position: chr3:37451787-37452179 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 175-456
Cow position: chr3:22170908-22171196 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 99

Conread position: 175-535
Cow position: chr3:23496837-23496490 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 143

Conread position: 175-535
Cow position: chr3:54945844-54946219 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 157

Conread position: 179-535
Cow position: chr3:51578597-51578238 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 5

Conread position: 180-496
Cow position: chr3:35511512-35511830 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 122

Conread position: 180-602
Cow position: chr3:73394844-73395271 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 287
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 150

Conread position: 183-600
Cow position: chr3:26493494-26493087 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 196

Conread position: 184-494
Cow position: chr3:44932244-44932559 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 142

Conread position: 184-600
Cow position: chr3:8923773-8924192 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 145

Conread position: 187-600
Cow position: chr3:29360400-29359994 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 270
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 38

Conread position: 189-539
Cow position: chr3:52652333-52651987 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 76

Conread position: 196-595
Cow position: chr3:11711701-11712106 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 85, 28

Conread position: 197-531
Cow position: chr3:57624216-57624548 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 68

Conread position: 198-600
Cow position: chr3:55992122-55991718 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 208

Conread position: 199-420
Cow position: chr3:32869900-32870120 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 83

Conread position: 199-533
Cow position: chr3:5096955-5097293 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 66

Conread position: 199-600
Cow position: chr3:26065752-26066157 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 268
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 97

Conread position: 200-536
Cow position: chr3:77365542-77365200 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 130, 24

Conread position: 200-541
Cow position: chr3:14633235-14632895 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 82, 57

Conread position: 200-544
Cow position: chr3:66900990-66900637 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 86

Conread position: 200-566
Cow position: chr3:13302104-13301733 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 121

Conread position: 200-568
Cow position: chr3:45647891-45648251 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 134, 63

Conread position: 200-594
Cow position: chr3:51234344-51233940 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 87

Conread position: 200-595
Cow position: chr3:39171732-39171338 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 77

Conread position: 200-599
Cow position: chr3:18725882-18725494 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 11

Conread position: 200-600
Cow position: chr3:5374085-5374479 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 132, 151

Conread position: 200-601
Cow position: chr3:45647428-45647837 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 255
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 125

Conread position: 200-602
Cow position: chr3:67744876-67744469 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 276
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 127

Conread position: 200-605
Cow position: chr3:23471716-23471288 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 282
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 83

Conread position: 206-534
Cow position: chr3:55836071-55835733 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 120

Conread position: 206-593
Cow position: chr3:54862664-54862278 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 54

Conread position: 206-594
Cow position: chr3:54881514-54881920 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 206-600
Cow position: chr3:74611320-74611715 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 211-510
Cow position: chr3:70334938-70334635 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 11

Conread position: 211-600
Cow position: chr3:23092220-23091827 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 195

Conread position: 211-600
Cow position: chr3:62883966-62884348 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 38

Conread position: 212-579
Cow position: chr3:18217002-18216643 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 110

Conread position: 212-600
Cow position: chr3:58130764-58131142 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 79

Conread position: 215-555
Cow position: chr3:71135555-71135891 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 200

Conread position: 216-517
Cow position: chr3:34741633-34741939 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 72, 43

Conread position: 221-491
Cow position: chr3:26960823-26960548 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 107

Conread position: 221-600
Cow position: chr3:2198655-2199034 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 223-463
Cow position: chr3:61913374-61913603 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 23

Conread position: 227-467
Cow position: chr3:14625608-14625374 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 67, 34

Conread position: 227-589
Cow position: chr3:61009657-61009305 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 57

Conread position: 228-481
Cow position: chr3:56704074-56703817 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 46

Conread position: 228-600
Cow position: chr3:53509906-53509544 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 60, 104

Conread position: 229-605
Cow position: chr3:55373794-55373410 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 176

Conread position: 234-508
Cow position: chr3:18757991-18757714 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 90

Conread position: 240-530
Cow position: chr3:55777825-55778116 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 76

Conread position: 240-597
Cow position: chr3:49132258-49131914 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 82

Conread position: 240-598
Cow position: chr3:3736076-3736449 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 240-601
Cow position: chr3:70354447-70354085 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 159

Conread position: 241-510
Cow position: chr3:10896621-10896882 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 96

Conread position: 241-519
Cow position: chr3:79376051-79376339 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 222

Conread position: 243-520
Cow position: chr3:77448860-77449131 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 256, 42

Conread position: 251-452
Cow position: chr3:15859868-15859665 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 86

Conread position: 251-477
Cow position: chr3:55106640-55106413 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 135

Conread position: 251-605
Cow position: chr3:74206007-74205652 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 15

Conread position: 254-600
Cow position: chr3:18686713-18687071 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 30

Conread position: 258-508
Cow position: chr3:74878784-74878531 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 149

Conread position: 263-434
Cow position: chr3:2810433-2810256 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 32

Conread position: 266-510
Cow position: chr3:63269039-63269283 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 43

Conread position: 266-531
Cow position: chr3:67930368-67930103 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 72

Conread position: 266-532
Cow position: chr3:56711830-56711553 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 155

Conread position: 266-592
Cow position: chr3:82075239-82074920 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 26

Conread position: 266-600
Cow position: chr3:34669914-34669593 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 61

Conread position: 266-600
Cow position: chr3:50281944-50281601 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 114

Conread position: 266-601
Cow position: chr3:61322662-61322989 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 71

Conread position: 267-605
Cow position: chr3:20092698-20092369 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 124

Conread position: 271-583
Cow position: chr3:35278389-35278705 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 138

Conread position: 285-480
Cow position: chr3:15992550-15992747 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 49

Conread position: 287-600
Cow position: chr3:58765239-58764916 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 38

Conread position: 289-600
Cow position: chr3:58973143-58973446 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 34

Conread position: 292-592
Cow position: chr3:69516938-69517241 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 30

Conread position: 295-584
Cow position: chr3:28477934-28478211 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 185

Conread position: 304-593
Cow position: chr3:34675577-34675867 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 16

Conread position: 308-510
Cow position: chr3:73820511-73820309 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 15

Conread position: 308-598
Cow position: chr3:20158262-20158538 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 200, 60

Conread position: 308-599
Cow position: chr3:15221665-15221368 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 308-605
Cow position: chr3:3889705-3889403 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 12

Conread position: 309-510
Cow position: chr3:40629925-40629722 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 123

Conread position: 309-594
Cow position: chr3:3037069-3036777 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 11

Conread position: 309-600
Cow position: chr3:51492640-51492935 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 166

Conread position: 310-505
Cow position: chr3:55815721-55815904 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 310-602
Cow position: chr3:46063357-46063626 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 92

Conread position: 312-599
Cow position: chr3:74846845-74846556 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 106, 10

Conread position: 312-600
Cow position: chr3:61116995-61116702 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 116

Conread position: 324-600
Cow position: chr3:11920163-11919887 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 137

Conread position: 324-605
Cow position: chr3:14506040-14505758 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 86

Conread position: 325-579
Cow position: chr3:25250786-25251035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 187, 64

Conread position: 327-594
Cow position: chr3:57634135-57634410 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 117

Conread position: 329-579
Cow position: chr3:68262646-68262893 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 40

Conread position: 332-600
Cow position: chr3:9074459-9074194 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 333-593
Cow position: chr3:39911170-39910915 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 180, 17

Conread position: 333-600
Cow position: chr3:3649333-3649069 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 161, 55

Conread position: 335-594
Cow position: chr3:58292007-58291747 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 126

Conread position: 337-600
Cow position: chr3:9629772-9630032 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 80

Conread position: 345-547
Cow position: chr3:28238675-28238472 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 64

Conread position: 348-569
Cow position: chr3:35874068-35873853 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 51

Conread position: 350-605
Cow position: chr3:56483415-56483676 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 19

Conread position: 353-600
Cow position: chr3:26089099-26088845 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 192

Conread position: 356-600
Cow position: chr3:18214235-18213987 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 189

Conread position: 359-605
Cow position: chr3:5601256-5601013 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 30

Conread position: 363-588
Cow position: chr3:48271245-48271465 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 87

Conread position: 370-599
Cow position: chr3:73436521-73436290 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 28

Conread position: 371-593
Cow position: chr3:24538796-24539017 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 72

Conread position: 371-594
Cow position: chr3:41550455-41550230 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 172

Conread position: 374-508
Cow position: chr3:77981394-77981259 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 374-572
Cow position: chr3:57830163-57829956 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 21

Conread position: 374-600
Cow position: chr3:58448136-58447916 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 68

Conread position: 392-602
Cow position: chr3:51781051-51780844 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 122

Conread position: 395-600
Cow position: chr3:73741926-73741718 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 76

Conread position: 396-600
Cow position: chr3:30839194-30839393 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 68

Conread position: 396-601
Cow position: chr3:17634098-17633893 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 146

Conread position: 397-600
Cow position: chr3:891215-891414 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 10

Conread position: 399-593
Cow position: chr3:10431552-10431744 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 59

Conread position: 401-588
Cow position: chr3:77490529-77490711 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 169, 41

Conread position: 401-599
Cow position: chr3:64484199-64484399 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 143

Conread position: 404-599
Cow position: chr3:65771379-65771186 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 134

Conread position: 404-600
Cow position: chr3:25090989-25091182 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 40

Conread position: 407-600
Cow position: chr3:24300317-24300517 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 136

Conread position: 410-600
Cow position: chr3:25076208-25076015 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 134

Conread position: 414-600
Cow position: chr3:61411091-61411272 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 28

Conread position: 422-574
Cow position: chr3:75142605-75142458 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 50

Conread position: 424-603
Cow position: chr3:40100744-40100556 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 427-599
Cow position: chr3:43654133-43653967 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 15

Conread position: 433-600
Cow position: chr3:909651-909479 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 116

Conread position: 442-600
Cow position: chr3:68086118-68085963 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 41

Conread position: 444-600
Cow position: chr3:26741038-26740889 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 446-600
Cow position: chr3:31247661-31247812 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 62, 94

Conread position: 447-600
Cow position: chr3:29291684-29291831 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 119, 57

Conread position: 447-600
Cow position: chr3:51441569-51441721 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 79

Conread position: 448-600
Cow position: chr3:8746234-8746083 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 92

Conread position: 449-591
Cow position: chr3:22171376-22171516 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 450-585
Cow position: chr3:74912852-74912990 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 94

Conread position: 450-589
Cow position: chr3:18866032-18865892 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 15

Conread position: 453-600
Cow position: chr3:43590894-43591046 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 482-603
Cow position: chr3:76913045-76913169 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 66

Show alignments to all cow chromosomes.