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Cow genome map

           
Conread name:
           
Emb1-C0005191_K10
        

               
Conread position:
               
1-411
               

               
Cow position:
               
chr7:39401563-39401988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr7:62102198-62102805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 474
               

               
Conread position:
               
1-605
               

               
Cow position:
               
chr7:19466651-19466018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr7:13629242-13629537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
143, 208
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr7:33275654-33276052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
5-596
               

               
Cow position:
               
chr7:68867722-68868289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr7:68588006-68588381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
6-382
               

               
Cow position:
               
chr7:35652461-35652075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr7:42431440-42431839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr7:51407720-51408109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 328
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr7:59713083-59713499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 129
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr7:58301608-58301169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
6-449
               

               
Cow position:
               
chr7:9079990-9080440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr7:53268809-53269269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr7:39042214-39042671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
6-489
               

               
Cow position:
               
chr7:29378508-29378042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
139, 107
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:23664479-23663994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:34428176-34428682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:37568644-37569155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
136, 42
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:39939355-39939842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:45945016-45944521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
6-491
               

               
Cow position:
               
chr7:53053776-53053297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
6-495
               

               
Cow position:
               
chr7:20534491-20534983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
6-496
               

               
Cow position:
               
chr7:4418848-4418347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
6-506
               

               
Cow position:
               
chr7:26012029-26012561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
6-510
               

               
Cow position:
               
chr7:19267754-19267244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
6-510
               

               
Cow position:
               
chr7:25512506-25511998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
6-511
               

               
Cow position:
               
chr7:25703608-25703098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
6-511
               

               
Cow position:
               
chr7:34669726-34670242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
6-520
               

               
Cow position:
               
chr7:11870217-11869701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
140, 104
               

               
Conread position:
               
6-533
               

               
Cow position:
               
chr7:39929889-39930435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 304
               

               
Conread position:
               
6-535
               

               
Cow position:
               
chr7:3322437-3322946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 39
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr7:34017702-34018253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr7:18388781-18388214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr7:23257242-23256670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 292
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr7:34412671-34412092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
6-569
               

               
Cow position:
               
chr7:52752283-52751708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
6-589
               

               
Cow position:
               
chr7:45592649-45593240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
6-592
               

               
Cow position:
               
chr7:32277145-32277746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 344
               

               
Conread position:
               
6-599
               

               
Cow position:
               
chr7:4130181-4129552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
6-599
               

               
Cow position:
               
chr7:19949031-19948439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
6-599
               

               
Cow position:
               
chr7:56098223-56098804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 330
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:6057744-6058342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:7096435-7095828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:7107192-7106564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:14542436-14541847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:19051696-19051117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 111
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:19400063-19399464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:25685427-25684832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:26196177-26195590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:26632195-26631598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:27388369-27387759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:50076109-50075516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:53986369-53985785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:58170347-58170960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
6-600
               

               
Cow position:
               
chr7:68088243-68088842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
7-390
               

               
Cow position:
               
chr7:31204920-31204514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
7-510
               

               
Cow position:
               
chr7:57259413-57258897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
7-575
               

               
Cow position:
               
chr7:17816377-17816947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
7-600
               

               
Cow position:
               
chr7:24767616-24767023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
7-600
               

               
Cow position:
               
chr7:43234841-43234227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
9-505
               

               
Cow position:
               
chr7:20105407-20104901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 291
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr7:9810323-9810042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr7:63556210-63556543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr7:11903618-11903944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr7:12994778-12995166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
132, 154
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr7:40570889-40571288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr7:56887152-56886765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
200, 33
               

               
Conread position:
               
10-496
               

               
Cow position:
               
chr7:46117030-46116528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
10-503
               

               
Cow position:
               
chr7:4452221-4452723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
10-510
               

               
Cow position:
               
chr7:9193622-9193111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
10-535
               

               
Cow position:
               
chr7:45157753-45158271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
10-536
               

               
Cow position:
               
chr7:34433660-34433126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
10-592
               

               
Cow position:
               
chr7:1261641-1262238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
10-593
               

               
Cow position:
               
chr7:67819737-67820322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
10-600
               

               
Cow position:
               
chr7:33697591-33698189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
10-600
               

               
Cow position:
               
chr7:48243296-48243874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
10-601
               

               
Cow position:
               
chr7:59030612-59031205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
11-510
               

               
Cow position:
               
chr7:18964542-18965035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 270
               

               
Conread position:
               
11-599
               

               
Cow position:
               
chr7:67838965-67839559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr7:47771358-47771060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
12-485
               

               
Cow position:
               
chr7:40916199-40916691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 341
               

               
Conread position:
               
12-504
               

               
Cow position:
               
chr7:39149562-39150070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
12-540
               

               
Cow position:
               
chr7:15566391-15566913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
12-600
               

               
Cow position:
               
chr7:36745934-36746540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 268
               

               
Conread position:
               
13-510
               

               
Cow position:
               
chr7:20794652-20794142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 267
               

               
Conread position:
               
17-344
               

               
Cow position:
               
chr7:47071433-47071096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
22-492
               

               
Cow position:
               
chr7:64229269-64228785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
22-529
               

               
Cow position:
               
chr7:44454634-44454132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
22-535
               

               
Cow position:
               
chr7:36128621-36129143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
22-590
               

               
Cow position:
               
chr7:46823300-46823876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
27-495
               

               
Cow position:
               
chr7:58841282-58841759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
27-600
               

               
Cow position:
               
chr7:44590214-44589655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
28-502
               

               
Cow position:
               
chr7:63548387-63547904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 226
               

               
Conread position:
               
28-535
               

               
Cow position:
               
chr7:44597062-44596548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
32-261
               

               
Cow position:
               
chr7:34213953-34214194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
39-419
               

               
Cow position:
               
chr7:34198968-34199362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 6
               

               
Conread position:
               
40-598
               

               
Cow position:
               
chr7:10099694-10099145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
41-361
               

               
Cow position:
               
chr7:6036128-6036446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
41-413
               

               
Cow position:
               
chr7:13985668-13985291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
41-487
               

               
Cow position:
               
chr7:24851343-24850899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
41-588
               

               
Cow position:
               
chr7:25445049-25445601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
42-491
               

               
Cow position:
               
chr7:4583093-4582622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 305
               

               
Conread position:
               
42-567
               

               
Cow position:
               
chr7:33772263-33772800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
50-491
               

               
Cow position:
               
chr7:53698264-53697801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 355
               

               
Conread position:
               
50-510
               

               
Cow position:
               
chr7:40953212-40952739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 254
               

               
Conread position:
               
50-546
               

               
Cow position:
               
chr7:20177045-20176544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
50-552
               

               
Cow position:
               
chr7:64364874-64364357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 199
               

               
Conread position:
               
50-595
               

               
Cow position:
               
chr7:28563727-28563167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 223
               

               
Conread position:
               
51-471
               

               
Cow position:
               
chr7:28583903-28584333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr7:2923296-2923754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 302
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr7:39167119-39167569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 230
               

               
Conread position:
               
51-588
               

               
Cow position:
               
chr7:19982179-19981644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
51-593
               

               
Cow position:
               
chr7:3336885-3336332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
52-510
               

               
Cow position:
               
chr7:14520382-14519915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
52-594
               

               
Cow position:
               
chr7:51321378-51321943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
54-458
               

               
Cow position:
               
chr7:11160904-11161317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
66-495
               

               
Cow position:
               
chr7:31094672-31094236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
66-495
               

               
Cow position:
               
chr7:35275399-35274969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 164
               

               
Conread position:
               
66-600
               

               
Cow position:
               
chr7:2896431-2896972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
66-600
               

               
Cow position:
               
chr7:19881372-19880828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
66-602
               

               
Cow position:
               
chr7:47547064-47547642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 572
               

               
Conread position:
               
70-468
               

               
Cow position:
               
chr7:41328347-41327955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
70-503
               

               
Cow position:
               
chr7:54712089-54712540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
72, 269
               

               
Conread position:
               
72-491
               

               
Cow position:
               
chr7:8877552-8877986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 214
               

               
Conread position:
               
72-600
               

               
Cow position:
               
chr7:68956365-68956886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
74-417
               

               
Cow position:
               
chr7:28089918-28090264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
74-539
               

               
Cow position:
               
chr7:18508849-18508384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
76-535
               

               
Cow position:
               
chr7:5250234-5249760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
77-486
               

               
Cow position:
               
chr7:40758565-40758136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 390
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr7:17756725-17757139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
79-600
               

               
Cow position:
               
chr7:64140443-64139928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 198
               

               
Conread position:
               
81-600
               

               
Cow position:
               
chr7:55077001-55076491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
88-535
               

               
Cow position:
               
chr7:13593466-13593922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
51, 191
               

               
Conread position:
               
104-491
               

               
Cow position:
               
chr7:64269275-64268888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
105-535
               

               
Cow position:
               
chr7:40067357-40067814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
108-453
               

               
Cow position:
               
chr7:32819523-32819887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 222
               

               
Conread position:
               
109-600
               

               
Cow position:
               
chr7:20918614-20918127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
114-492
               

               
Cow position:
               
chr7:21649820-21650206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
114-600
               

               
Cow position:
               
chr7:1733479-1732986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
117-599
               

               
Cow position:
               
chr7:31315054-31315536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
119-420
               

               
Cow position:
               
chr7:10450254-10449946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
122-514
               

               
Cow position:
               
chr7:61461226-61460835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
123-605
               

               
Cow position:
               
chr7:48289088-48289588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
126-546
               

               
Cow position:
               
chr7:9136571-9137001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
139-491
               

               
Cow position:
               
chr7:53097344-53097697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
139-506
               

               
Cow position:
               
chr7:32914860-32915237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
139-521
               

               
Cow position:
               
chr7:10943108-10942724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 268
               

               
Conread position:
               
139-589
               

               
Cow position:
               
chr7:37364541-37364989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
139-600
               

               
Cow position:
               
chr7:40192484-40192966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 281
               

               
Conread position:
               
140-321
               

               
Cow position:
               
chr7:14400175-14399979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
144-393
               

               
Cow position:
               
chr7:68753940-68753677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
145-585
               

               
Cow position:
               
chr7:21197624-21197180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
145-600
               

               
Cow position:
               
chr7:24220423-24220887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
146-594
               

               
Cow position:
               
chr7:53612900-53613343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
146-600
               

               
Cow position:
               
chr7:57537770-57537302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 188
               

               
Conread position:
               
147-520
               

               
Cow position:
               
chr7:42222676-42222298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
149-491
               

               
Cow position:
               
chr7:25195309-25195648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
149-600
               

               
Cow position:
               
chr7:53744143-53743683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
150-508
               

               
Cow position:
               
chr7:14076514-14076158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 197
               

               
Conread position:
               
153-479
               

               
Cow position:
               
chr7:48443993-48443674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
153-552
               

               
Cow position:
               
chr7:48548098-48547691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr7:26501693-26501443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
154-520
               

               
Cow position:
               
chr7:40008581-40008967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 119
               

               
Conread position:
               
158-600
               

               
Cow position:
               
chr7:44049598-44049160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr7:3283131-3283485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 184
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr7:3311611-3311965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
6, 184
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr7:20147566-20147213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
164-592
               

               
Cow position:
               
chr7:15610766-15611177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
164-592
               

               
Cow position:
               
chr7:36830436-36830861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
164-605
               

               
Cow position:
               
chr7:600117-600556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr7:3134673-3134351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 160
               

               
Conread position:
               
166-593
               

               
Cow position:
               
chr7:25015344-25014921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
166-602
               

               
Cow position:
               
chr7:18858116-18858556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 257
               

               
Conread position:
               
167-598
               

               
Cow position:
               
chr7:26665781-26665354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
169-472
               

               
Cow position:
               
chr7:50108506-50108193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
169-557
               

               
Cow position:
               
chr7:7507340-7507724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
170-439
               

               
Cow position:
               
chr7:14079389-14079111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
170-600
               

               
Cow position:
               
chr7:20081284-20080857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
172-583
               

               
Cow position:
               
chr7:23177320-23177740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
174-451
               

               
Cow position:
               
chr7:40991500-40991771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
240, 20
               

               
Conread position:
               
174-535
               

               
Cow position:
               
chr7:38060650-38060273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
174-535
               

               
Cow position:
               
chr7:40726975-40727343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
174-605
               

               
Cow position:
               
chr7:45748049-45747634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
177-456
               

               
Cow position:
               
chr7:34162577-34162857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
180-487
               

               
Cow position:
               
chr7:59148578-59148883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
180-594
               

               
Cow position:
               
chr7:22152954-22153374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr7:16022091-16022528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr7:43215301-43215731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
180-600
               

               
Cow position:
               
chr7:64003264-64003679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
181-390
               

               
Cow position:
               
chr7:10345643-10345417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
181-510
               

               
Cow position:
               
chr7:17406561-17406218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 284
               

               
Conread position:
               
181-600
               

               
Cow position:
               
chr7:59245753-59246168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
187-605
               

               
Cow position:
               
chr7:58489888-58490299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
199-407
               

               
Cow position:
               
chr7:66179983-66179772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
199-491
               

               
Cow position:
               
chr7:6706113-6706406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr7:48335655-48335333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
200-495
               

               
Cow position:
               
chr7:147229-147526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr7:48714665-48714971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 196
               

               
Conread position:
               
200-510
               

               
Cow position:
               
chr7:12408422-12408115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 195
               

               
Conread position:
               
200-538
               

               
Cow position:
               
chr7:59843938-59843594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 122
               

               
Conread position:
               
200-594
               

               
Cow position:
               
chr7:11011875-11011479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
200-600
               

               
Cow position:
               
chr7:52536433-52536034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
200-600
               

               
Cow position:
               
chr7:69066514-69066915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
201-600
               

               
Cow position:
               
chr7:20537180-20537591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 121
               

               
Conread position:
               
202-600
               

               
Cow position:
               
chr7:59075670-59076067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
205-495
               

               
Cow position:
               
chr7:3773448-3773155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 119
               

               
Conread position:
               
206-456
               

               
Cow position:
               
chr7:37818024-37817777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 146
               

               
Conread position:
               
206-594
               

               
Cow position:
               
chr7:23131420-23131806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
206-595
               

               
Cow position:
               
chr7:26466574-26466954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 88
               

               
Conread position:
               
206-600
               

               
Cow position:
               
chr7:20225-20626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 194
               

               
Conread position:
               
206-600
               

               
Cow position:
               
chr7:25104187-25104587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
209-454
               

               
Cow position:
               
chr7:51249047-51248795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
211-510
               

               
Cow position:
               
chr7:10897096-10896812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
211-562
               

               
Cow position:
               
chr7:58773731-58774064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
211-573
               

               
Cow position:
               
chr7:45955754-45956120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
211-601
               

               
Cow position:
               
chr7:11872770-11872379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 150
               

               
Conread position:
               
212-535
               

               
Cow position:
               
chr7:55694215-55693899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
212-591
               

               
Cow position:
               
chr7:47875142-47874781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
213-479
               

               
Cow position:
               
chr7:32372689-32372951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
213-516
               

               
Cow position:
               
chr7:45709378-45709071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 200
               

               
Conread position:
               
213-535
               

               
Cow position:
               
chr7:51884675-51884354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
214-601
               

               
Cow position:
               
chr7:48648793-48648404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
216-592
               

               
Cow position:
               
chr7:62610139-62610501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
217-600
               

               
Cow position:
               
chr7:12755316-12754938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
235-535
               

               
Cow position:
               
chr7:12413445-12413158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
235-599
               

               
Cow position:
               
chr7:24667244-24667601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 24
               

               
Conread position:
               
240-507
               

               
Cow position:
               
chr7:62006323-62006061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr7:48205242-48204974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
240-599
               

               
Cow position:
               
chr7:47172852-47172494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
240-600
               

               
Cow position:
               
chr7:66266727-66266369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
240-600
               

               
Cow position:
               
chr7:67761231-67761606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 253
               

               
Conread position:
               
241-558
               

               
Cow position:
               
chr7:8826675-8826989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
171, 182
               

               
Conread position:
               
246-600
               

               
Cow position:
               
chr7:34214458-34214809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
254-495
               

               
Cow position:
               
chr7:17713605-17713360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
257-510
               

               
Cow position:
               
chr7:5212608-5212350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
257-530
               

               
Cow position:
               
chr7:32079324-32079600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
257-589
               

               
Cow position:
               
chr7:68516809-68516485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
258-600
               

               
Cow position:
               
chr7:23251686-23251348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
265-592
               

               
Cow position:
               
chr7:58923274-58923612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
266-600
               

               
Cow position:
               
chr7:14524359-14524707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
268-496
               

               
Cow position:
               
chr7:22880154-22880384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
271-589
               

               
Cow position:
               
chr7:60761246-60761556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
275-605
               

               
Cow position:
               
chr7:46103412-46103742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr7:46327863-46327629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
294-600
               

               
Cow position:
               
chr7:4512904-4512602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
300-589
               

               
Cow position:
               
chr7:51632821-51633104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
305-599
               

               
Cow position:
               
chr7:41913770-41913485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
308-551
               

               
Cow position:
               
chr7:47771495-47771736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
308-582
               

               
Cow position:
               
chr7:56081520-56081789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
308-599
               

               
Cow position:
               
chr7:57577376-57577086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
308-600
               

               
Cow position:
               
chr7:37444801-37445082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
309-589
               

               
Cow position:
               
chr7:48012486-48012766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
310-600
               

               
Cow position:
               
chr7:26908108-26907823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
324-506
               

               
Cow position:
               
chr7:7313679-7313860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
325-564
               

               
Cow position:
               
chr7:34441243-34441006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
325-594
               

               
Cow position:
               
chr7:39603278-39603534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
184, 73
               

               
Conread position:
               
325-595
               

               
Cow position:
               
chr7:55714010-55714283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 115
               

               
Conread position:
               
328-588
               

               
Cow position:
               
chr7:68522900-68522640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
333-510
               

               
Cow position:
               
chr7:33719984-33720160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
333-589
               

               
Cow position:
               
chr7:40894491-40894748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
333-594
               

               
Cow position:
               
chr7:8074152-8073890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
334-510
               

               
Cow position:
               
chr7:51917936-51917760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
334-585
               

               
Cow position:
               
chr7:53005306-53005551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
335-600
               

               
Cow position:
               
chr7:38429759-38429481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 78
               

               
Conread position:
               
335-601
               

               
Cow position:
               
chr7:18947793-18947522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr7:21545411-21545175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
337-569
               

               
Cow position:
               
chr7:60574946-60575175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
342-581
               

               
Cow position:
               
chr7:57260287-57260052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
342-600
               

               
Cow position:
               
chr7:22981295-22981556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
343-592
               

               
Cow position:
               
chr7:57311584-57311829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
345-510
               

               
Cow position:
               
chr7:49371144-49370979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 154
               

               
Conread position:
               
348-510
               

               
Cow position:
               
chr7:65157089-65156932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr7:25857501-25857256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
357-575
               

               
Cow position:
               
chr7:1350383-1350164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
361-603
               

               
Cow position:
               
chr7:65460817-65461052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
362-510
               

               
Cow position:
               
chr7:67653699-67653848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
370-595
               

               
Cow position:
               
chr7:20109004-20108780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
374-579
               

               
Cow position:
               
chr7:8786591-8786387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
386-592
               

               
Cow position:
               
chr7:60961009-60961215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
389-574
               

               
Cow position:
               
chr7:14043979-14044164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
396-594
               

               
Cow position:
               
chr7:12233029-12233237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
397-578
               

               
Cow position:
               
chr7:3748916-3748732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
399-600
               

               
Cow position:
               
chr7:25914473-25914273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
402-605
               

               
Cow position:
               
chr7:40140075-40140282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
403-599
               

               
Cow position:
               
chr7:51086172-51086373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
416-601
               

               
Cow position:
               
chr7:13587213-13587399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
105, 123
               

               
Conread position:
               
427-593
               

               
Cow position:
               
chr7:664210-664044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
427-600
               

               
Cow position:
               
chr7:19423601-19423779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
427-600
               

               
Cow position:
               
chr7:24521297-24521467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
428-594
               

               
Cow position:
               
chr7:45748993-45748828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
429-586
               

               
Cow position:
               
chr7:10345419-10345264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
436-594
               

               
Cow position:
               
chr7:48443502-48443340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
436-600
               

               
Cow position:
               
chr7:9054046-9054215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
446-595
               

               
Cow position:
               
chr7:59713778-59713932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
455-594
               

               
Cow position:
               
chr7:39494982-39494846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
459-600
               

               
Cow position:
               
chr7:66206664-66206807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
465-600
               

               
Cow position:
               
chr7:5220931-5221067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.