Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-496
Cow position: chr9:5141539-5141032 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 26

Conread position: 1-510
Cow position: chr9:44914653-44915152 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 346
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 141, 42

Conread position: 1-535
Cow position: chr9:5246307-5245770 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 60

Conread position: 1-535
Cow position: chr9:64050100-64050644 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 1-569
Cow position: chr9:42445513-42446102 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 1-579
Cow position: chr9:15805464-15806048 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 391
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 105, 50

Conread position: 1-588
Cow position: chr9:29808928-29808321 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 170

Conread position: 1-600
Cow position: chr9:39428344-39428946 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 196

Conread position: 1-602
Cow position: chr9:28948319-28947720 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 50

Conread position: 6-289
Cow position: chr9:15014123-15014409 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 6-313
Cow position: chr9:5839441-5839130 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 136, 43

Conread position: 6-314
Cow position: chr9:27085926-27085600 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 302

Conread position: 6-324
Cow position: chr9:21689347-21689017 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 21

Conread position: 6-355
Cow position: chr9:38385416-38385776 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 199, 139

Conread position: 6-404
Cow position: chr9:64453665-64454072 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 19

Conread position: 6-405
Cow position: chr9:8612762-8612330 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 53

Conread position: 6-405
Cow position: chr9:21674521-21674942 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 281
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 138, 60

Conread position: 6-412
Cow position: chr9:5393493-5393092 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 37

Conread position: 6-436
Cow position: chr9:27076801-27077224 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 286
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 133, 160

Conread position: 6-454
Cow position: chr9:34918827-34919258 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 295
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 33

Conread position: 6-460
Cow position: chr9:20416054-20416514 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 319
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 27

Conread position: 6-462
Cow position: chr9:3724601-3725070 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 45

Conread position: 6-491
Cow position: chr9:8998809-8998314 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 37

Conread position: 6-491
Cow position: chr9:15982626-15983107 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 40

Conread position: 6-491
Cow position: chr9:35904295-35904780 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 6-507
Cow position: chr9:44518017-44517522 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 343
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 45

Conread position: 6-508
Cow position: chr9:648229-647726 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 323
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 54

Conread position: 6-510
Cow position: chr9:24997043-24997572 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 6-510
Cow position: chr9:31078628-31079135 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 342
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 14

Conread position: 6-516
Cow position: chr9:28726275-28726785 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 6-522
Cow position: chr9:36446080-36445550 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 85, 40

Conread position: 6-533
Cow position: chr9:2858996-2858455 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 6-535
Cow position: chr9:9461206-9461737 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 44

Conread position: 6-535
Cow position: chr9:11146208-11146718 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 367
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 156, 26

Conread position: 6-550
Cow position: chr9:25972939-25972412 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 359
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 197, 121

Conread position: 6-559
Cow position: chr9:4859006-4858431 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 252

Conread position: 6-573
Cow position: chr9:38546861-38546299 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 35

Conread position: 6-573
Cow position: chr9:47926366-47925804 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 6-583
Cow position: chr9:19382787-19382199 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 79

Conread position: 6-586
Cow position: chr9:9200265-9200854 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 6-586
Cow position: chr9:54528970-54528379 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 6-589
Cow position: chr9:48773786-48773218 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 205

Conread position: 6-592
Cow position: chr9:1520273-1520877 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 6-594
Cow position: chr9:15006321-15006887 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 144

Conread position: 6-595
Cow position: chr9:21462384-21463008 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 69

Conread position: 6-596
Cow position: chr9:17410733-17411334 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 401
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 45

Conread position: 6-600
Cow position: chr9:25469468-25468909 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 66

Conread position: 6-600
Cow position: chr9:32265931-32266532 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 255

Conread position: 6-600
Cow position: chr9:34310498-34309882 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 6-600
Cow position: chr9:43037955-43037336 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 60

Conread position: 6-600
Cow position: chr9:55322106-55321489 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 6-601
Cow position: chr9:11870670-11870063 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 87

Conread position: 6-604
Cow position: chr9:52407617-52407002 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 407
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 156, 45

Conread position: 7-491
Cow position: chr9:20680944-20681441 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 320
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 278

Conread position: 7-491
Cow position: chr9:34696841-34697334 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 342
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 36

Conread position: 7-496
Cow position: chr9:49301634-49301120 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 345
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 75, 21

Conread position: 7-510
Cow position: chr9:11313059-11313565 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 339
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 133, 55

Conread position: 7-586
Cow position: chr9:14185147-14184538 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 7-601
Cow position: chr9:3959511-3958927 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 174

Conread position: 7-601
Cow position: chr9:6880230-6879634 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 63

Conread position: 9-530
Cow position: chr9:30477323-30477852 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 346
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 47

Conread position: 10-402
Cow position: chr9:26555743-26556151 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 13

Conread position: 10-503
Cow position: chr9:54610776-54611283 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 10-510
Cow position: chr9:1950370-1949862 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 341
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 50

Conread position: 10-510
Cow position: chr9:7410231-7409708 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 10-510
Cow position: chr9:8534234-8534745 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 38

Conread position: 10-510
Cow position: chr9:20988990-20989513 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 29

Conread position: 10-537
Cow position: chr9:39681810-39681253 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 370
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 31

Conread position: 10-574
Cow position: chr9:2863879-2863324 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 82

Conread position: 10-590
Cow position: chr9:15950684-15951296 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 272

Conread position: 10-593
Cow position: chr9:3932420-3931818 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 10-602
Cow position: chr9:35375873-35375297 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 397
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 33

Conread position: 11-521
Cow position: chr9:214006-214529 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 366

Conread position: 12-367
Cow position: chr9:11555396-11555764 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 131, 34

Conread position: 12-592
Cow position: chr9:20960825-20961398 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 69

Conread position: 13-318
Cow position: chr9:5341085-5340770 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 125, 27

Conread position: 13-319
Cow position: chr9:5608113-5607793 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 47

Conread position: 13-599
Cow position: chr9:56861457-56860871 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 32

Conread position: 14-505
Cow position: chr9:52724752-52725266 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 331
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 107, 336

Conread position: 15-528
Cow position: chr9:34092959-34093507 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 372
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 99, 41

Conread position: 22-491
Cow position: chr9:49982665-49983124 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 120, 26

Conread position: 27-442
Cow position: chr9:30189553-30189109 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 94

Conread position: 27-600
Cow position: chr9:18110437-18111007 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 15

Conread position: 27-605
Cow position: chr9:42498263-42497658 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 29

Conread position: 31-589
Cow position: chr9:10127240-10127802 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 25

Conread position: 33-399
Cow position: chr9:30664344-30664728 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 370

Conread position: 39-595
Cow position: chr9:26057020-26057589 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 367
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 198

Conread position: 40-394
Cow position: chr9:11155930-11155577 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 104, 24

Conread position: 40-605
Cow position: chr9:20038735-20039279 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 10

Conread position: 41-505
Cow position: chr9:30440170-30440655 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 204

Conread position: 41-522
Cow position: chr9:52633083-52633560 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 41-558
Cow position: chr9:17929184-17928647 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 352
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 136

Conread position: 45-491
Cow position: chr9:25964402-25964868 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 300
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 30

Conread position: 45-522
Cow position: chr9:3594106-3594587 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 332
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 99, 312

Conread position: 49-600
Cow position: chr9:3388110-3387551 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 367
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 252

Conread position: 50-511
Cow position: chr9:5510142-5509668 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 289

Conread position: 50-566
Cow position: chr9:30401999-30402539 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 360
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 7

Conread position: 50-600
Cow position: chr9:5501264-5500699 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 377
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 92, 10

Conread position: 51-537
Cow position: chr9:50080628-50081125 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 333
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 230

Conread position: 51-546
Cow position: chr9:21888585-21888076 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 341
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 19

Conread position: 51-592
Cow position: chr9:9552502-9551957 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 357
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 226

Conread position: 51-600
Cow position: chr9:11299284-11299838 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 362
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 81

Conread position: 52-376
Cow position: chr9:10666099-10666442 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 5

Conread position: 52-427
Cow position: chr9:10326966-10327356 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 163

Conread position: 52-602
Cow position: chr9:28983603-28983034 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 227

Conread position: 55-595
Cow position: chr9:59386367-59386909 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 363
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 89, 232

Conread position: 60-393
Cow position: chr9:35369288-35368942 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 79, 314

Conread position: 61-593
Cow position: chr9:22443207-22443781 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 381
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 362

Conread position: 66-408
Cow position: chr9:43814841-43814490 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 171

Conread position: 66-480
Cow position: chr9:1951868-1952294 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 212

Conread position: 66-535
Cow position: chr9:5071212-5071683 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 207

Conread position: 66-589
Cow position: chr9:41958383-41958913 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 74

Conread position: 66-593
Cow position: chr9:54205924-54206464 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 217

Conread position: 66-600
Cow position: chr9:41680133-41679597 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 70-509
Cow position: chr9:5836547-5836095 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 290
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 92

Conread position: 71-491
Cow position: chr9:35167570-35167141 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 286
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 214

Conread position: 74-600
Cow position: chr9:19903446-19902927 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 358
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 142

Conread position: 77-413
Cow position: chr9:18002561-18002909 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 199

Conread position: 78-510
Cow position: chr9:4645944-4646380 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 291
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 176

Conread position: 81-600
Cow position: chr9:54681863-54681356 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 345
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 161, 48

Conread position: 91-600
Cow position: chr9:39152309-39152826 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 139

Conread position: 92-543
Cow position: chr9:56253277-56252812 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 164

Conread position: 97-486
Cow position: chr9:38344267-38343860 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 245

Conread position: 97-508
Cow position: chr9:22114270-22114688 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 265
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 19

Conread position: 97-510
Cow position: chr9:5763259-5763686 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 243

Conread position: 104-438
Cow position: chr9:5621667-5622020 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 337

Conread position: 104-454
Cow position: chr9:54997662-54998027 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 12

Conread position: 105-527
Cow position: chr9:48106754-48107188 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 283
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 197

Conread position: 105-594
Cow position: chr9:26404152-26403636 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 338
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 227

Conread position: 105-600
Cow position: chr9:5433994-5433480 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 108-506
Cow position: chr9:21030677-21030257 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 307

Conread position: 109-508
Cow position: chr9:48856699-48856300 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 18

Conread position: 110-569
Cow position: chr9:43871330-43870852 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 323
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 118

Conread position: 112-520
Cow position: chr9:11830364-11829939 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 229

Conread position: 114-407
Cow position: chr9:2034522-2034221 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 191

Conread position: 114-563
Cow position: chr9:29841243-29840796 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 309
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 169

Conread position: 117-509
Cow position: chr9:50295679-50296087 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 15

Conread position: 117-527
Cow position: chr9:2113659-2114081 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 62

Conread position: 119-479
Cow position: chr9:49271001-49271361 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 119

Conread position: 119-600
Cow position: chr9:5226816-5227325 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 317
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 308

Conread position: 126-535
Cow position: chr9:4267651-4268065 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 271
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 73

Conread position: 126-540
Cow position: chr9:6933730-6934161 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 138

Conread position: 127-592
Cow position: chr9:34568414-34568851 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 336
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 15, 147

Conread position: 135-511
Cow position: chr9:54924964-54924564 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 385

Conread position: 139-508
Cow position: chr9:13169347-13169716 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 133

Conread position: 139-535
Cow position: chr9:32677008-32676601 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 291

Conread position: 143-510
Cow position: chr9:5327567-5327203 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 19

Conread position: 152-599
Cow position: chr9:10666715-10667166 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 153-496
Cow position: chr9:12184055-12183707 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 62

Conread position: 153-496
Cow position: chr9:44408340-44407997 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 11

Conread position: 153-599
Cow position: chr9:14961256-14960807 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 159-500
Cow position: chr9:52787234-52787583 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 5

Conread position: 159-504
Cow position: chr9:15215379-15215736 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 5

Conread position: 162-605
Cow position: chr9:16745974-16745530 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 164-489
Cow position: chr9:35850196-35849871 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 106

Conread position: 165-600
Cow position: chr9:50544336-50544782 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 109

Conread position: 165-600
Cow position: chr9:58669675-58669235 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 168-510
Cow position: chr9:11201872-11201535 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 5

Conread position: 169-521
Cow position: chr9:44553030-44552678 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 19

Conread position: 169-600
Cow position: chr9:63598114-63597691 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 35, 58

Conread position: 171-597
Cow position: chr9:34468302-34468721 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 93

Conread position: 172-598
Cow position: chr9:8599893-8599462 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 96

Conread position: 173-471
Cow position: chr9:31587808-31588118 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 101

Conread position: 173-605
Cow position: chr9:59924830-59924400 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 96

Conread position: 174-479
Cow position: chr9:38692250-38692558 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 160

Conread position: 174-497
Cow position: chr9:51311958-51311632 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 100

Conread position: 174-583
Cow position: chr9:3070135-3070538 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 97

Conread position: 179-537
Cow position: chr9:58204946-58204588 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 154

Conread position: 180-600
Cow position: chr9:43912211-43911787 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 139

Conread position: 180-600
Cow position: chr9:54437534-54437113 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 295
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 16

Conread position: 182-589
Cow position: chr9:11102543-11102935 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 83

Conread position: 183-600
Cow position: chr9:4861665-4861231 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 195-412
Cow position: chr9:27052073-27052296 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 197-468
Cow position: chr9:6225195-6225467 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 89

Conread position: 197-523
Cow position: chr9:32625254-32624937 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 212, 28

Conread position: 197-535
Cow position: chr9:9753138-9753473 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 68

Conread position: 199-535
Cow position: chr9:55084042-55084384 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 40

Conread position: 199-595
Cow position: chr9:17310307-17310703 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 258
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 54

Conread position: 199-605
Cow position: chr9:8724051-8723625 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 276
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 138

Conread position: 200-539
Cow position: chr9:41283280-41282928 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 40

Conread position: 200-564
Cow position: chr9:33598235-33597873 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 63

Conread position: 200-592
Cow position: chr9:8951157-8950758 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 87

Conread position: 200-594
Cow position: chr9:23043029-23042640 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 40

Conread position: 200-594
Cow position: chr9:32732432-32732823 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 39

Conread position: 200-599
Cow position: chr9:5756749-5757141 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 268
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 65

Conread position: 200-600
Cow position: chr9:47869261-47868859 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 264
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 87, 127

Conread position: 201-535
Cow position: chr9:33119629-33119971 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 125

Conread position: 206-490
Cow position: chr9:47875699-47875994 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 17

Conread position: 206-508
Cow position: chr9:5029763-5029457 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 84, 57

Conread position: 206-510
Cow position: chr9:44108582-44108888 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 90, 33

Conread position: 206-510
Cow position: chr9:58853763-58853456 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 54

Conread position: 206-514
Cow position: chr9:29108785-29108475 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 33

Conread position: 206-593
Cow position: chr9:8657186-8657570 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 117

Conread position: 206-594
Cow position: chr9:20839862-20839488 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 83, 57

Conread position: 206-601
Cow position: chr9:19637390-19637785 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 82

Conread position: 211-479
Cow position: chr9:24399443-24399704 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 54

Conread position: 211-552
Cow position: chr9:37098990-37099332 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 72

Conread position: 211-599
Cow position: chr9:388772-389161 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 256
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 58

Conread position: 224-586
Cow position: chr9:32816904-32817272 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 227-478
Cow position: chr9:42901274-42901023 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 27

Conread position: 227-600
Cow position: chr9:8618019-8617684 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 58

Conread position: 232-521
Cow position: chr9:11364115-11363828 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 23

Conread position: 233-600
Cow position: chr9:49847415-49847051 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 96

Conread position: 239-584
Cow position: chr9:27310550-27310898 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 264, 23

Conread position: 240-535
Cow position: chr9:18216886-18217182 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 120

Conread position: 240-592
Cow position: chr9:47108805-47108469 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 85

Conread position: 242-599
Cow position: chr9:15684576-15684932 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 249-600
Cow position: chr9:42037857-42037507 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 251-504
Cow position: chr9:19493256-19493515 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 75

Conread position: 251-527
Cow position: chr9:46242061-46242332 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 14

Conread position: 251-535
Cow position: chr9:10980913-10981195 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 152

Conread position: 251-592
Cow position: chr9:32848094-32847751 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 12

Conread position: 251-593
Cow position: chr9:59795076-59795416 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 162

Conread position: 251-594
Cow position: chr9:64007659-64008022 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 9

Conread position: 257-600
Cow position: chr9:35708424-35708765 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 66, 128

Conread position: 258-545
Cow position: chr9:25922023-25921728 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 27

Conread position: 261-603
Cow position: chr9:9823308-9823651 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 73

Conread position: 265-600
Cow position: chr9:51720710-51721052 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 52

Conread position: 266-586
Cow position: chr9:48133921-48133601 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 151

Conread position: 266-599
Cow position: chr9:42173000-42173330 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 118

Conread position: 267-599
Cow position: chr9:32115422-32115744 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 67, 27

Conread position: 270-597
Cow position: chr9:5575507-5575175 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 142

Conread position: 271-563
Cow position: chr9:34106909-34106604 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 114

Conread position: 273-600
Cow position: chr9:47931278-47930966 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 14

Conread position: 286-574
Cow position: chr9:41957973-41957686 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 35

Conread position: 287-600
Cow position: chr9:20897069-20896754 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 84

Conread position: 295-605
Cow position: chr9:24837690-24837390 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 300-577
Cow position: chr9:27292128-27292403 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 48

Conread position: 300-600
Cow position: chr9:33668880-33668579 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 19

Conread position: 300-605
Cow position: chr9:55562649-55562345 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 22

Conread position: 303-603
Cow position: chr9:6203644-6203934 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 42

Conread position: 308-574
Cow position: chr9:1867598-1867327 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 94

Conread position: 308-594
Cow position: chr9:34204277-34203989 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 311-600
Cow position: chr9:58698967-58699274 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 85, 248

Conread position: 311-602
Cow position: chr9:15034049-15033759 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 32

Conread position: 312-600
Cow position: chr9:23943425-23943121 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 275

Conread position: 324-600
Cow position: chr9:5399266-5398989 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 11

Conread position: 325-594
Cow position: chr9:33059153-33059412 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 63

Conread position: 325-600
Cow position: chr9:2888106-2887828 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 32

Conread position: 327-574
Cow position: chr9:50598189-50598433 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 132

Conread position: 332-574
Cow position: chr9:5340727-5340492 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 238, 67

Conread position: 333-600
Cow position: chr9:6851948-6852216 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 66

Conread position: 336-600
Cow position: chr9:49651841-49651585 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 21

Conread position: 342-571
Cow position: chr9:16118838-16118611 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 170, 57

Conread position: 342-594
Cow position: chr9:34725399-34725648 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 67

Conread position: 358-593
Cow position: chr9:25400101-25400345 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 76

Conread position: 358-599
Cow position: chr9:50522254-50522481 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 360-600
Cow position: chr9:4538763-4539005 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 58, 115

Conread position: 360-600
Cow position: chr9:29819809-29819561 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 39

Conread position: 362-596
Cow position: chr9:20200385-20200157 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 125, 32

Conread position: 362-600
Cow position: chr9:17110863-17110627 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 76

Conread position: 365-596
Cow position: chr9:18237079-18237299 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 374-594
Cow position: chr9:40007938-40007722 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 17

Conread position: 378-575
Cow position: chr9:5059243-5059436 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 23

Conread position: 378-599
Cow position: chr9:43926036-43926250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 29

Conread position: 389-600
Cow position: chr9:12499077-12498864 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 18

Conread position: 392-600
Cow position: chr9:21537331-21537123 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 14, 28

Conread position: 395-586
Cow position: chr9:48576585-48576773 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 107

Conread position: 399-600
Cow position: chr9:26645984-26645774 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 12

Conread position: 406-549
Cow position: chr9:26093377-26093232 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 406-599
Cow position: chr9:53794481-53794673 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 37

Conread position: 406-600
Cow position: chr9:26559561-26559760 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 138

Conread position: 414-575
Cow position: chr9:59761591-59761755 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 130

Conread position: 414-600
Cow position: chr9:24429054-24429242 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 158

Conread position: 419-594
Cow position: chr9:20668410-20668247 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 424-587
Cow position: chr9:6214122-6214282 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 107

Conread position: 429-592
Cow position: chr9:27347829-27347661 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 11

Conread position: 431-599
Cow position: chr9:9881681-9881849 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 80

Conread position: 433-600
Cow position: chr9:60549388-60549559 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 116

Conread position: 434-602
Cow position: chr9:27052614-27052782 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 8

Conread position: 437-600
Cow position: chr9:41561254-41561419 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 107

Conread position: 439-600
Cow position: chr9:33999129-33999291 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 133

Conread position: 439-600
Cow position: chr9:43697135-43697290 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 101

Conread position: 446-595
Cow position: chr9:45510743-45510889 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 114, 32

Conread position: 447-600
Cow position: chr9:34431829-34431674 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 94

Conread position: 447-600
Cow position: chr9:62330989-62331144 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 96

Conread position: 450-599
Cow position: chr9:48634894-48635048 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 472-600
Cow position: chr9:42900881-42900755 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 71

Show alignments to all cow chromosomes.