Cow genome map

Conread name: Emb1-C0005191_K10

Conread position: 1-495
Cow position: chrX:37781486-37781013 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 326
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 283, 38

Conread position: 1-510
Cow position: chrX:34564895-34565395 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 50

Conread position: 1-510
Cow position: chrX:45200299-45199788 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 335
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 109, 16

Conread position: 1-566
Cow position: chrX:20340294-20339725 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 375
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 141, 53

Conread position: 1-605
Cow position: chrX:33803426-33802800 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 124

Conread position: 3-509
Cow position: chrX:26626092-26625561 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 356
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 139, 63

Conread position: 4-452
Cow position: chrX:48247239-48246795 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 300
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 39

Conread position: 4-595
Cow position: chrX:42171701-42171095 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 58

Conread position: 5-332
Cow position: chrX:37377660-37377338 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 41

Conread position: 5-402
Cow position: chrX:42994213-42994617 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 137, 51

Conread position: 5-491
Cow position: chrX:22812661-22813153 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 335
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 137, 42

Conread position: 5-491
Cow position: chrX:31489111-31489611 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 46

Conread position: 5-491
Cow position: chrX:44054403-44054893 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 333
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 51

Conread position: 5-495
Cow position: chrX:14884363-14883860 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 331
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 137, 55

Conread position: 6-279
Cow position: chrX:20957615-20957894 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 120

Conread position: 6-286
Cow position: chrX:25205304-25205606 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 135, 0

Conread position: 6-287
Cow position: chrX:9072813-9073093 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 54

Conread position: 6-287
Cow position: chrX:12111058-12110766 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 69

Conread position: 6-312
Cow position: chrX:9011927-9012244 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 33

Conread position: 6-319
Cow position: chrX:8661355-8661682 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 53

Conread position: 6-376
Cow position: chrX:14122151-14121769 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 33

Conread position: 6-394
Cow position: chrX:40452621-40452215 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 335

Conread position: 6-403
Cow position: chrX:15139949-15139541 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 128, 39

Conread position: 6-405
Cow position: chrX:160440-160025 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 280

Conread position: 6-406
Cow position: chrX:35609586-35609998 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 39

Conread position: 6-412
Cow position: chrX:38439076-38439491 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 6-415
Cow position: chrX:7551195-7550777 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 282
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 56

Conread position: 6-458
Cow position: chrX:12249401-12249869 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 136, 33

Conread position: 6-472
Cow position: chrX:1810559-1810088 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 136, 51

Conread position: 6-474
Cow position: chrX:27516134-27516602 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 136, 54

Conread position: 6-484
Cow position: chrX:18293533-18294002 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 26

Conread position: 6-491
Cow position: chrX:1055793-1055290 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 338
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 37

Conread position: 6-491
Cow position: chrX:13868297-13868793 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 328
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 134, 50

Conread position: 6-491
Cow position: chrX:21592886-21593372 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 6-491
Cow position: chrX:31949330-31948844 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 37

Conread position: 6-492
Cow position: chrX:26441180-26440693 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 331
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 50

Conread position: 6-495
Cow position: chrX:878770-878284 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 332
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 43

Conread position: 6-495
Cow position: chrX:7571503-7572001 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 53

Conread position: 6-495
Cow position: chrX:11655677-11656177 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 336
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 38

Conread position: 6-495
Cow position: chrX:40269076-40269588 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 33

Conread position: 6-500
Cow position: chrX:4630100-4629599 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 329
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 299

Conread position: 6-504
Cow position: chrX:27446291-27446791 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 343
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 37

Conread position: 6-509
Cow position: chrX:40481271-40480763 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 345
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 135, 45

Conread position: 6-510
Cow position: chrX:8796851-8797360 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 54

Conread position: 6-510
Cow position: chrX:18695326-18694820 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 6-510
Cow position: chrX:38936291-38936811 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 297

Conread position: 6-510
Cow position: chrX:46532920-46532384 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 351
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 133, 45

Conread position: 6-511
Cow position: chrX:18118871-18118355 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 331
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 37

Conread position: 6-520
Cow position: chrX:24200795-24201307 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 347
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 133, 30

Conread position: 6-521
Cow position: chrX:28111094-28111634 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 6-535
Cow position: chrX:12309786-12309247 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 363
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 133, 32

Conread position: 6-535
Cow position: chrX:17743670-17744195 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 362
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 34

Conread position: 6-535
Cow position: chrX:32743138-32743672 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 40

Conread position: 6-541
Cow position: chrX:45501748-45502290 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 348
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 136, 53

Conread position: 6-558
Cow position: chrX:3154655-3154084 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 45

Conread position: 6-574
Cow position: chrX:17964916-17964344 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 6-589
Cow position: chrX:1616457-1615846 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 337

Conread position: 6-594
Cow position: chrX:11073611-11073002 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 398
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 136, 283

Conread position: 6-594
Cow position: chrX:38094925-38094309 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 40

Conread position: 6-598
Cow position: chrX:15329253-15329843 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 54

Conread position: 6-599
Cow position: chrX:23414787-23414174 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 39

Conread position: 6-600
Cow position: chrX:3161424-3160846 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 6-600
Cow position: chrX:16514647-16514072 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 74

Conread position: 6-600
Cow position: chrX:19878633-19879239 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 68

Conread position: 6-600
Cow position: chrX:30543687-30543085 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 6-600
Cow position: chrX:36840461-36841063 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 374

Conread position: 6-601
Cow position: chrX:20888044-20887426 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 404
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 63, 41

Conread position: 6-601
Cow position: chrX:39546379-39545787 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 357

Conread position: 6-602
Cow position: chrX:31729058-31729661 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 402
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 138, 43

Conread position: 6-605
Cow position: chrX:31261037-31260398 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 346

Conread position: 7-280
Cow position: chrX:37128456-37128730 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 194, 53

Conread position: 7-390
Cow position: chrX:35388306-35387910 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 55

Conread position: 7-600
Cow position: chrX:15007550-15006936 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 41

Conread position: 10-389
Cow position: chrX:12115645-12116037 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 40

Conread position: 10-542
Cow position: chrX:30162610-30163151 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 70

Conread position: 10-553
Cow position: chrX:12290341-12290876 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 365
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 130, 40

Conread position: 10-592
Cow position: chrX:28929455-28930030 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 122

Conread position: 12-366
Cow position: chrX:6012501-6012132 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 25

Conread position: 12-600
Cow position: chrX:161034-161623 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 44

Conread position: 12-600
Cow position: chrX:917770-917176 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 263

Conread position: 12-600
Cow position: chrX:14974129-14973534 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 395
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 247

Conread position: 13-603
Cow position: chrX:32309701-32310308 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 329

Conread position: 14-510
Cow position: chrX:5871921-5872428 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 36

Conread position: 15-528
Cow position: chrX:34401607-34402128 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 349
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 127, 41

Conread position: 15-566
Cow position: chrX:42247566-42247013 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 28

Conread position: 15-600
Cow position: chrX:27288139-27287536 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 262

Conread position: 17-355
Cow position: chrX:35937465-35937123 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 226

Conread position: 17-535
Cow position: chrX:25419553-25419015 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 22-406
Cow position: chrX:41790821-41790437 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 257
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 21

Conread position: 22-457
Cow position: chrX:39700829-39701282 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 33

Conread position: 22-575
Cow position: chrX:2300541-2301102 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 256

Conread position: 24-535
Cow position: chrX:25035768-25035243 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 356
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 131, 38

Conread position: 27-279
Cow position: chrX:6658990-6659253 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 95

Conread position: 27-343
Cow position: chrX:26845127-26845463 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 44

Conread position: 27-405
Cow position: chrX:17271675-17271283 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 60

Conread position: 27-600
Cow position: chrX:10301959-10302540 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 28-460
Cow position: chrX:7718474-7718909 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 31

Conread position: 31-558
Cow position: chrX:2786926-2786396 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 7

Conread position: 32-594
Cow position: chrX:40693140-40692555 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 163

Conread position: 35-535
Cow position: chrX:11561765-11562285 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 334

Conread position: 41-602
Cow position: chrX:630664-630107 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 42-462
Cow position: chrX:25232216-25232655 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 263

Conread position: 45-600
Cow position: chrX:41733560-41733000 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 46-508
Cow position: chrX:25848549-25849014 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 309
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 96, 261

Conread position: 47-602
Cow position: chrX:38963746-38964321 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 10

Conread position: 49-509
Cow position: chrX:34441810-34441344 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 183

Conread position: 50-405
Cow position: chrX:41743551-41743918 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 95, 228

Conread position: 50-430
Cow position: chrX:42086500-42086885 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 146

Conread position: 50-452
Cow position: chrX:42462110-42461692 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 7

Conread position: 50-491
Cow position: chrX:31250030-31250479 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 7

Conread position: 50-529
Cow position: chrX:7277566-7278044 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 141

Conread position: 50-530
Cow position: chrX:38218356-38218850 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 50-535
Cow position: chrX:29289214-29289717 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 331
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 7

Conread position: 50-541
Cow position: chrX:34502561-34503066 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 285

Conread position: 50-548
Cow position: chrX:4864916-4865380 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 335
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 43

Conread position: 51-400
Cow position: chrX:28105565-28105924 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 6

Conread position: 51-451
Cow position: chrX:5017767-5017360 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 175

Conread position: 52-395
Cow position: chrX:35533491-35533851 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 5

Conread position: 54-600
Cow position: chrX:36010250-36009713 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 201

Conread position: 55-599
Cow position: chrX:28787014-28787543 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 37

Conread position: 60-485
Cow position: chrX:42507996-42507563 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 293
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 82, 216

Conread position: 60-492
Cow position: chrX:13912727-13913167 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 298
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 218

Conread position: 60-535
Cow position: chrX:43730544-43730085 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 104

Conread position: 60-575
Cow position: chrX:47743726-47744265 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 357
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 81, 25

Conread position: 66-491
Cow position: chrX:47343946-47344387 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 282
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 58, 281

Conread position: 66-491
Cow position: chrX:47967254-47967698 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 286
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 220

Conread position: 66-510
Cow position: chrX:19689869-19690326 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 306
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 36

Conread position: 66-595
Cow position: chrX:11718124-11717583 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 21

Conread position: 67-537
Cow position: chrX:27705248-27705728 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 182

Conread position: 69-601
Cow position: chrX:31443163-31442615 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 62

Conread position: 70-503
Cow position: chrX:40558018-40557575 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 287
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 158

Conread position: 72-600
Cow position: chrX:7645918-7646459 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 183

Conread position: 74-491
Cow position: chrX:26492663-26493097 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 282
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 183

Conread position: 74-502
Cow position: chrX:43527164-43527611 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 290
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 12, 206

Conread position: 77-495
Cow position: chrX:38007103-38006674 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 262

Conread position: 79-317
Cow position: chrX:25302085-25301833 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 97

Conread position: 81-542
Cow position: chrX:33639634-33640121 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 325
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 51

Conread position: 82-263
Cow position: chrX:8103423-8103228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 83-487
Cow position: chrX:20709744-20710161 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 103

Conread position: 85-600
Cow position: chrX:25337850-25338387 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 478

Conread position: 89-598
Cow position: chrX:25713486-25713996 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 49

Conread position: 90-531
Cow position: chrX:9161266-9161711 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 182

Conread position: 95-491
Cow position: chrX:21063969-21064374 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 255
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 133

Conread position: 97-510
Cow position: chrX:12826432-12826862 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 234

Conread position: 98-600
Cow position: chrX:20376656-20377166 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 172

Conread position: 99-510
Cow position: chrX:11314090-11313674 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 104-397
Cow position: chrX:19188628-19188937 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 246

Conread position: 104-418
Cow position: chrX:14924692-14925017 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 174

Conread position: 105-344
Cow position: chrX:42855104-42855361 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 107-535
Cow position: chrX:27509322-27508887 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 279
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 23

Conread position: 108-581
Cow position: chrX:5047201-5046733 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 109-535
Cow position: chrX:33466314-33466763 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 290
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 183

Conread position: 110-495
Cow position: chrX:45414602-45414208 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 256
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 148

Conread position: 110-510
Cow position: chrX:30133626-30133207 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 230

Conread position: 114-340
Cow position: chrX:39347084-39346842 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 218

Conread position: 114-602
Cow position: chrX:41238661-41238138 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 343
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 178

Conread position: 126-491
Cow position: chrX:46033004-46032636 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 179

Conread position: 126-579
Cow position: chrX:31294826-31294389 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 75

Conread position: 130-569
Cow position: chrX:27176585-27176142 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 42

Conread position: 131-452
Cow position: chrX:42874697-42875035 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 280

Conread position: 135-594
Cow position: chrX:17541690-17542158 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 198

Conread position: 138-400
Cow position: chrX:37836318-37836592 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 118

Conread position: 139-440
Cow position: chrX:40647708-40648026 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 136

Conread position: 139-491
Cow position: chrX:45404104-45403734 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 235
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 270

Conread position: 139-566
Cow position: chrX:8730809-8731262 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 298
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 198

Conread position: 139-600
Cow position: chrX:6675195-6674712 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 140-491
Cow position: chrX:488221-488595 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 129

Conread position: 141-575
Cow position: chrX:17631066-17630623 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 141-599
Cow position: chrX:7496981-7497435 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 17

Conread position: 141-602
Cow position: chrX:8925438-8925904 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 146

Conread position: 142-491
Cow position: chrX:17725711-17726066 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 130

Conread position: 143-496
Cow position: chrX:8558727-8558367 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 191

Conread position: 145-476
Cow position: chrX:8517616-8517948 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 19

Conread position: 145-520
Cow position: chrX:21816001-21816389 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 19

Conread position: 147-508
Cow position: chrX:27432180-27431809 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 190

Conread position: 147-600
Cow position: chrX:46073075-46072607 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 307
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 16

Conread position: 150-397
Cow position: chrX:38840632-38840888 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 97

Conread position: 150-418
Cow position: chrX:2383234-2383510 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 14

Conread position: 150-594
Cow position: chrX:20151591-20152065 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 310
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 82

Conread position: 153-495
Cow position: chrX:27680149-27680494 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 11

Conread position: 153-592
Cow position: chrX:24259832-24259386 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 117

Conread position: 155-534
Cow position: chrX:24366080-24365685 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 253
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 179

Conread position: 156-492
Cow position: chrX:158019-157685 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 133, 230

Conread position: 156-600
Cow position: chrX:23497913-23497474 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 288
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 113

Conread position: 157-605
Cow position: chrX:19930409-19930850 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 6

Conread position: 159-593
Cow position: chrX:29761928-29761488 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 5

Conread position: 161-393
Cow position: chrX:30833083-30832854 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 169, 120

Conread position: 164-454
Cow position: chrX:30862060-30862370 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 258

Conread position: 164-498
Cow position: chrX:34663081-34662748 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 78

Conread position: 164-600
Cow position: chrX:18287296-18286880 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 19

Conread position: 164-600
Cow position: chrX:40788963-40789406 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 166-600
Cow position: chrX:17662837-17662398 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 281
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 242

Conread position: 167-402
Cow position: chrX:2648589-2648350 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 98

Conread position: 167-545
Cow position: chrX:28579982-28580370 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 240

Conread position: 167-600
Cow position: chrX:41083686-41084119 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 165

Conread position: 169-523
Cow position: chrX:13323239-13322863 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 9, 102

Conread position: 170-541
Cow position: chrX:27394250-27393882 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 101

Conread position: 170-589
Cow position: chrX:37119363-37119787 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 66

Conread position: 171-600
Cow position: chrX:21664957-21664522 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 172-539
Cow position: chrX:13382090-13382468 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 249
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 241

Conread position: 174-534
Cow position: chrX:2029158-2029523 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 163

Conread position: 174-546
Cow position: chrX:23514250-23513870 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 81

Conread position: 174-600
Cow position: chrX:6563280-6563720 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 303

Conread position: 176-599
Cow position: chrX:7425234-7425667 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 226

Conread position: 176-605
Cow position: chrX:42011050-42011489 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 180-483
Cow position: chrX:16416282-16416592 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 72

Conread position: 180-496
Cow position: chrX:13245365-13245694 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 64

Conread position: 180-539
Cow position: chrX:29032191-29032551 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 74

Conread position: 180-600
Cow position: chrX:39938743-39938315 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 272
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 152

Conread position: 180-604
Cow position: chrX:11856203-11856628 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 291
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 90

Conread position: 181-520
Cow position: chrX:35925742-35926081 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 81

Conread position: 187-578
Cow position: chrX:41560458-41560090 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 87

Conread position: 188-600
Cow position: chrX:25388450-25388049 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 190-600
Cow position: chrX:1499461-1499877 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 140, 86

Conread position: 195-520
Cow position: chrX:7362055-7361744 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 71

Conread position: 197-479
Cow position: chrX:11589790-11589509 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 51

Conread position: 199-506
Cow position: chrX:3147000-3147308 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 61

Conread position: 199-510
Cow position: chrX:44961548-44961862 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 125

Conread position: 200-510
Cow position: chrX:21004483-21004795 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 165

Conread position: 200-510
Cow position: chrX:37910254-37910556 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 134, 49

Conread position: 200-510
Cow position: chrX:46587619-46587933 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 201
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 87

Conread position: 200-558
Cow position: chrX:38549250-38549608 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 126

Conread position: 200-573
Cow position: chrX:17042492-17042858 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 193

Conread position: 200-579
Cow position: chrX:36975751-36976132 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 62

Conread position: 200-594
Cow position: chrX:1503140-1503524 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 63

Conread position: 200-599
Cow position: chrX:39558545-39558161 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 250
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 63

Conread position: 200-600
Cow position: chrX:22624283-22624683 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 98, 24

Conread position: 200-605
Cow position: chrX:10831695-10831278 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 276
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 126

Conread position: 204-600
Cow position: chrX:29602027-29601606 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 80, 200

Conread position: 205-604
Cow position: chrX:33000710-33001124 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 78

Conread position: 206-532
Cow position: chrX:9041422-9041108 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 213, 80

Conread position: 206-581
Cow position: chrX:18216084-18216455 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 208

Conread position: 206-585
Cow position: chrX:25571186-25570796 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 59

Conread position: 206-588
Cow position: chrX:10959593-10959205 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 200

Conread position: 206-599
Cow position: chrX:8917661-8918035 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 59

Conread position: 210-600
Cow position: chrX:6203367-6203744 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 85

Conread position: 211-413
Cow position: chrX:8682117-8681912 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 31

Conread position: 211-440
Cow position: chrX:28836089-28835862 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 204, 72

Conread position: 211-514
Cow position: chrX:16687249-16687557 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 13

Conread position: 211-574
Cow position: chrX:24132339-24131976 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 85

Conread position: 211-589
Cow position: chrX:31340517-31340902 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 178

Conread position: 211-600
Cow position: chrX:11746654-11747033 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 54

Conread position: 212-600
Cow position: chrX:15305474-15305093 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 12

Conread position: 212-600
Cow position: chrX:18456206-18456603 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 258

Conread position: 213-579
Cow position: chrX:11633493-11633862 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 50

Conread position: 225-395
Cow position: chrX:30005095-30005261 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 38

Conread position: 227-461
Cow position: chrX:46146732-46146500 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 62, 38

Conread position: 227-603
Cow position: chrX:38999672-39000053 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 230-600
Cow position: chrX:23666954-23667318 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 33

Conread position: 239-496
Cow position: chrX:23254373-23254108 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 191

Conread position: 239-511
Cow position: chrX:45633411-45633668 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 191, 24

Conread position: 244-454
Cow position: chrX:8913765-8913977 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 98

Conread position: 244-454
Cow position: chrX:8915509-8915721 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 98

Conread position: 245-441
Cow position: chrX:29055966-29056159 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 18

Conread position: 251-440
Cow position: chrX:34993992-34994173 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 164, 12

Conread position: 251-598
Cow position: chrX:47178005-47178343 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 94

Conread position: 251-600
Cow position: chrX:39415517-39415167 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 253-510
Cow position: chrX:40642839-40643089 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 32

Conread position: 254-536
Cow position: chrX:41068578-41068866 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 29

Conread position: 255-580
Cow position: chrX:13853475-13853807 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 44

Conread position: 257-575
Cow position: chrX:39126186-39126504 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 56

Conread position: 258-537
Cow position: chrX:29680404-29680120 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 66

Conread position: 261-601
Cow position: chrX:6041352-6041010 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 287

Conread position: 262-535
Cow position: chrX:41070799-41071069 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 118

Conread position: 266-510
Cow position: chrX:21566266-21566518 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 266-511
Cow position: chrX:27227987-27228238 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 145

Conread position: 266-524
Cow position: chrX:18417725-18417468 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 89

Conread position: 266-572
Cow position: chrX:32431491-32431799 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 55

Conread position: 267-504
Cow position: chrX:9365809-9365571 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 55

Conread position: 267-535
Cow position: chrX:41027022-41027298 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 50

Conread position: 273-603
Cow position: chrX:26493766-26493441 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 140

Conread position: 287-600
Cow position: chrX:29120934-29121244 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 36

Conread position: 289-599
Cow position: chrX:18142565-18142258 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 295-582
Cow position: chrX:6656282-6656566 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 24, 46

Conread position: 300-597
Cow position: chrX:26619202-26618918 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 211, 19

Conread position: 305-600
Cow position: chrX:17896043-17895733 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 112, 93

Conread position: 308-521
Cow position: chrX:25441082-25440878 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 182, 15

Conread position: 308-545
Cow position: chrX:12725646-12725877 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 90

Conread position: 308-574
Cow position: chrX:19678358-19678098 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 116

Conread position: 308-600
Cow position: chrX:22326031-22326317 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 18

Conread position: 309-600
Cow position: chrX:27771662-27771375 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 311-521
Cow position: chrX:7344999-7345208 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 30

Conread position: 315-574
Cow position: chrX:43426209-43426472 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 15

Conread position: 325-600
Cow position: chrX:9539250-9539522 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 72

Conread position: 325-600
Cow position: chrX:9839154-9839424 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 33

Conread position: 329-592
Cow position: chrX:22481850-22481599 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 43

Conread position: 332-602
Cow position: chrX:39339166-39338904 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 36

Conread position: 333-574
Cow position: chrX:15049428-15049664 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 82

Conread position: 334-594
Cow position: chrX:20882001-20881744 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 174, 35

Conread position: 349-573
Cow position: chrX:7806376-7806600 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 15

Conread position: 350-589
Cow position: chrX:29408073-29407832 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 65, 195

Conread position: 350-593
Cow position: chrX:15233315-15233072 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 32

Conread position: 350-600
Cow position: chrX:34356015-34355773 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 57

Conread position: 350-600
Cow position: chrX:46083924-46084175 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 34

Conread position: 361-600
Cow position: chrX:48089442-48089201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 150, 38

Conread position: 365-594
Cow position: chrX:21640392-21640620 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 96

Conread position: 372-510
Cow position: chrX:20011383-20011518 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 87

Conread position: 374-588
Cow position: chrX:35759963-35759745 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 171

Conread position: 376-574
Cow position: chrX:31602634-31602834 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 21

Conread position: 383-605
Cow position: chrX:48428487-48428721 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 171

Conread position: 384-593
Cow position: chrX:23179289-23179086 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 15

Conread position: 394-600
Cow position: chrX:29874377-29874169 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 128

Conread position: 397-600
Cow position: chrX:30980139-30979933 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 144

Conread position: 400-580
Cow position: chrX:159756-159576 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 60

Conread position: 401-600
Cow position: chrX:8780045-8780246 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 6

Conread position: 401-605
Cow position: chrX:35278330-35278538 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 96

Conread position: 403-569
Cow position: chrX:16419153-16419318 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 40

Conread position: 404-594
Cow position: chrX:34470722-34470907 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 40

Conread position: 416-589
Cow position: chrX:12304577-12304752 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 128

Conread position: 428-600
Cow position: chrX:28835734-28835556 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 122

Conread position: 429-602
Cow position: chrX:16291990-16291813 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 82, 113

Conread position: 433-602
Cow position: chrX:38722155-38722322 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 108

Conread position: 434-600
Cow position: chrX:6676860-6677029 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 113

Conread position: 443-574
Cow position: chrX:3951083-3951217 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 101

Conread position: 443-594
Cow position: chrX:46028718-46028565 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 100

Conread position: 443-600
Cow position: chrX:18417261-18417102 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 100

Conread position: 443-601
Cow position: chrX:29056336-29056492 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 7

Conread position: 447-600
Cow position: chrX:10289579-10289424 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 96

Conread position: 448-600
Cow position: chrX:37140517-37140671 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 139

Conread position: 449-583
Cow position: chrX:46146224-46146090 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 13

Conread position: 450-599
Cow position: chrX:37186212-37186361 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 45

Conread position: 450-605
Cow position: chrX:488729-488883 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 57, 92

Conread position: 451-589
Cow position: chrX:8103237-8103101 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 15

Conread position: 453-575
Cow position: chrX:22284936-22285056 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 61

Conread position: 455-592
Cow position: chrX:17952920-17952781 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 92

Conread position: 455-594
Cow position: chrX:2648156-2648020 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 73

Conread position: 458-600
Cow position: chrX:25602389-25602532 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 87

Conread position: 465-590
Cow position: chrX:30862405-30862528 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 73

Conread position: 470-602
Cow position: chrX:29675569-29675703 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 129

Show alignments to all cow chromosomes.