Cow genome map

Conread name: Emb1-C0005192_I11

Conread position: 2-207
Cow position: chr29:6755984-6756185 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 111

Conread position: 5-211
Cow position: chr29:3711371-3711581 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 5-212
Cow position: chr29:42886973-42887177 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 25

Conread position: 6-189
Cow position: chr29:24365903-24365714 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 111

Conread position: 6-214
Cow position: chr29:17436743-17436958 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 122

Conread position: 7-215
Cow position: chr29:34832391-34832184 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 83

Conread position: 8-204
Cow position: chr29:12025472-12025281 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 66

Conread position: 8-204
Cow position: chr29:35258980-35259179 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 112

Conread position: 8-204
Cow position: chr29:40891701-40891509 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 27

Conread position: 8-205
Cow position: chr29:7285458-7285652 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 49

Conread position: 8-205
Cow position: chr29:19949305-19949504 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 118

Conread position: 8-206
Cow position: chr29:12783965-12783756 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 74

Conread position: 8-207
Cow position: chr29:1011585-1011392 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 44

Conread position: 8-207
Cow position: chr29:31928984-31929188 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 122

Conread position: 8-209
Cow position: chr29:30227280-30227077 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 26

Conread position: 8-209
Cow position: chr29:38580975-38581195 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 8-210
Cow position: chr29:27911588-27911796 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 109

Conread position: 8-211
Cow position: chr29:27926771-27926979 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 109

Conread position: 8-212
Cow position: chr29:41530845-41531057 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 101

Conread position: 8-215
Cow position: chr29:13028439-13028659 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 8-216
Cow position: chr29:29057174-29057384 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 118

Conread position: 8-217
Cow position: chr29:396408-396615 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 105

Conread position: 8-220
Cow position: chr29:8669361-8669566 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 64

Conread position: 8-220
Cow position: chr29:44901652-44901448 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 22

Conread position: 11-207
Cow position: chr29:629536-629738 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 97

Conread position: 12-196
Cow position: chr29:21706397-21706207 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 89

Conread position: 12-204
Cow position: chr29:18878482-18878284 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 109

Conread position: 12-221
Cow position: chr29:4023005-4023211 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 112

Conread position: 14-207
Cow position: chr29:19187027-19187227 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 106

Conread position: 15-204
Cow position: chr29:14576873-14577055 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 15-207
Cow position: chr29:17222427-17222618 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 12

Conread position: 15-209
Cow position: chr29:4053326-4053141 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 15-218
Cow position: chr29:5995080-5994878 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 12

Conread position: 35-213
Cow position: chr29:38754902-38754731 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 38-215
Cow position: chr29:34600831-34600643 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 26

Conread position: 38-218
Cow position: chr29:685144-684965 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 67

Conread position: 44-216
Cow position: chr29:6441620-6441788 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 50-212
Cow position: chr29:18577494-18577650 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 68

Conread position: 52-218
Cow position: chr29:23711856-23711693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 53-172
Cow position: chr29:21443287-21443170 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 53-184
Cow position: chr29:28257192-28257320 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 53-184
Cow position: chr29:38582019-38582148 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 53-185
Cow position: chr29:7621513-7621379 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 10

Conread position: 53-189
Cow position: chr29:21508298-21508164 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 53-190
Cow position: chr29:33393729-33393872 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 53-192
Cow position: chr29:7124869-7125007 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 53-192
Cow position: chr29:7143346-7143485 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 53-193
Cow position: chr29:23913342-23913210 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 53-198
Cow position: chr29:17663710-17663566 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 75

Conread position: 53-199
Cow position: chr29:30440988-30441132 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 53-201
Cow position: chr29:23819339-23819189 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 53-202
Cow position: chr29:7955939-7955792 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 53-202
Cow position: chr29:34745607-34745465 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 26

Conread position: 53-203
Cow position: chr29:35737276-35737120 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 126

Conread position: 53-204
Cow position: chr29:2056112-2056258 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 57

Conread position: 53-204
Cow position: chr29:5409090-5408944 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 53-204
Cow position: chr29:7040821-7040670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 53-204
Cow position: chr29:17297187-17297336 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 53-204
Cow position: chr29:20167475-20167621 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 53-204
Cow position: chr29:26540489-26540342 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 53-204
Cow position: chr29:32656039-32655896 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 53-204
Cow position: chr29:35677492-35677343 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 53-205
Cow position: chr29:9378688-9378834 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 53-205
Cow position: chr29:17110008-17110152 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 53-205
Cow position: chr29:28949024-28949184 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 53-205
Cow position: chr29:36357177-36357327 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 53-206
Cow position: chr29:24188014-24187862 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 151, 67

Conread position: 53-207
Cow position: chr29:4484147-4484298 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 53-207
Cow position: chr29:23735037-23734885 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 53-207
Cow position: chr29:24292919-24293071 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 69

Conread position: 53-207
Cow position: chr29:25030226-25030075 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 53-208
Cow position: chr29:35084171-35084021 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 53-209
Cow position: chr29:16652207-16652361 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 53-209
Cow position: chr29:17085631-17085478 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 53-209
Cow position: chr29:22068689-22068538 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 53-209
Cow position: chr29:25944246-25944091 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 53-209
Cow position: chr29:29183773-29183926 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 53-210
Cow position: chr29:36220585-36220747 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 53-211
Cow position: chr29:2744216-2744064 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 53-211
Cow position: chr29:16200427-16200271 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 53-211
Cow position: chr29:22577128-22576973 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 53-211
Cow position: chr29:41094168-41094322 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 150, 67

Conread position: 53-212
Cow position: chr29:2219438-2219594 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 67

Conread position: 53-212
Cow position: chr29:5520434-5520278 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 53-212
Cow position: chr29:14375830-14375673 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 53-212
Cow position: chr29:23874511-23874668 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 53-212
Cow position: chr29:24119449-24119292 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 53-212
Cow position: chr29:26211103-26211259 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 53-212
Cow position: chr29:30294822-30294665 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 53-212
Cow position: chr29:30827457-30827614 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 53-212
Cow position: chr29:32656484-32656642 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 57

Conread position: 53-212
Cow position: chr29:32894314-32894463 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 53-212
Cow position: chr29:33143303-33143151 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 53-212
Cow position: chr29:42630172-42630323 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 53-212
Cow position: chr29:44684149-44684303 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 53-213
Cow position: chr29:1933520-1933363 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 53-213
Cow position: chr29:4492000-4491846 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 53-213
Cow position: chr29:8798964-8798804 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 132

Conread position: 53-213
Cow position: chr29:9078478-9078323 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 53-213
Cow position: chr29:11894749-11894909 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 142, 67

Conread position: 53-213
Cow position: chr29:22690276-22690435 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 153, 56

Conread position: 53-213
Cow position: chr29:26602250-26602407 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 53-213
Cow position: chr29:33321398-33321556 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 53-214
Cow position: chr29:3549654-3549813 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 53-214
Cow position: chr29:4441153-4440994 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 152, 26

Conread position: 53-214
Cow position: chr29:5046704-5046862 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 66

Conread position: 53-214
Cow position: chr29:8163778-8163619 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 53-214
Cow position: chr29:16290777-16290931 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 63

Conread position: 53-215
Cow position: chr29:936258-936412 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 53-215
Cow position: chr29:19910007-19910172 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 53-215
Cow position: chr29:22019136-22018977 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 138, 56

Conread position: 53-215
Cow position: chr29:28420806-28420967 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 149, 65

Conread position: 53-215
Cow position: chr29:38396411-38396573 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 118

Conread position: 53-215
Cow position: chr29:38732204-38732367 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 147, 67

Conread position: 53-217
Cow position: chr29:2414701-2414543 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 53-217
Cow position: chr29:4648158-4647999 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 56

Conread position: 53-217
Cow position: chr29:9800701-9800870 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 10

Conread position: 53-217
Cow position: chr29:22735397-22735236 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 64

Conread position: 53-217
Cow position: chr29:34744574-34744419 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 141, 20

Conread position: 53-217
Cow position: chr29:35458721-35458557 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 78

Conread position: 53-217
Cow position: chr29:37771835-37771674 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 53-218
Cow position: chr29:11227332-11227169 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 53-218
Cow position: chr29:21196598-21196438 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 56

Conread position: 53-219
Cow position: chr29:37618357-37618522 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 67

Conread position: 53-220
Cow position: chr29:27042323-27042487 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 117

Conread position: 53-221
Cow position: chr29:3292999-3293157 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 53-222
Cow position: chr29:10994563-10994727 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 53-222
Cow position: chr29:23678760-23678918 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 151, 61

Conread position: 53-222
Cow position: chr29:31786726-31786895 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 153, 56

Conread position: 53-223
Cow position: chr29:23142283-23142114 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 151, 56

Conread position: 53-225
Cow position: chr29:32799661-32799484 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 53-227
Cow position: chr29:32215759-32215925 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 53-233
Cow position: chr29:24604947-24605124 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 158, 56

Conread position: 53-249
Cow position: chr29:26017451-26017257 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 54-200
Cow position: chr29:41422859-41422715 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 54-204
Cow position: chr29:501249-501398 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 134, 108

Conread position: 54-204
Cow position: chr29:18450086-18449940 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 54-207
Cow position: chr29:1738194-1738348 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 146

Conread position: 54-207
Cow position: chr29:42404999-42405150 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 54-208
Cow position: chr29:15947219-15947371 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 54-209
Cow position: chr29:11611897-11612050 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 54-209
Cow position: chr29:26631093-26631252 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 54-209
Cow position: chr29:28813922-28813769 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 54-210
Cow position: chr29:6517281-6517434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 24

Conread position: 54-211
Cow position: chr29:8605883-8605733 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 54-211
Cow position: chr29:11081344-11081186 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 148, 66

Conread position: 54-211
Cow position: chr29:35189659-35189814 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 54-212
Cow position: chr29:16609800-16609956 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 54-213
Cow position: chr29:4120906-4121063 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 54-213
Cow position: chr29:34359769-34359622 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 54-215
Cow position: chr29:5953807-5953647 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 55

Conread position: 54-215
Cow position: chr29:22534013-22534173 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 149, 55

Conread position: 54-216
Cow position: chr29:16735276-16735436 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 54-217
Cow position: chr29:20626619-20626781 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 55

Conread position: 54-218
Cow position: chr29:20685221-20685384 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 66

Conread position: 54-218
Cow position: chr29:34356020-34356185 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 55

Conread position: 54-218
Cow position: chr29:35281516-35281684 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 54-219
Cow position: chr29:28715182-28715017 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 157, 55

Conread position: 54-221
Cow position: chr29:17462728-17462561 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 30

Conread position: 54-223
Cow position: chr29:10203824-10203985 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 54-223
Cow position: chr29:35292145-35292305 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 56

Conread position: 54-225
Cow position: chr29:16438727-16438553 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 54-226
Cow position: chr29:28734996-28734828 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 54-231
Cow position: chr29:24065738-24065910 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 55-200
Cow position: chr29:26539288-26539425 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 55-205
Cow position: chr29:23698031-23698169 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 55-212
Cow position: chr29:25474976-25475137 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 142

Conread position: 55-214
Cow position: chr29:31489372-31489534 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 55-215
Cow position: chr29:30123451-30123293 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 55-217
Cow position: chr29:25268189-25268352 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 156, 84

Conread position: 55-218
Cow position: chr29:23574358-23574523 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 148, 65

Conread position: 56-209
Cow position: chr29:22720589-22720444 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 56-211
Cow position: chr29:30920349-30920195 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 56-212
Cow position: chr29:14746834-14746984 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 56-213
Cow position: chr29:11685221-11685376 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 57-205
Cow position: chr29:8841390-8841250 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 57-215
Cow position: chr29:29189043-29188886 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 12

Conread position: 58-204
Cow position: chr29:2071148-2070998 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 58-212
Cow position: chr29:14828172-14828023 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 58-220
Cow position: chr29:3584060-3583902 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 59-215
Cow position: chr29:4741334-4741179 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 144, 48

Conread position: 61-215
Cow position: chr29:20643974-20644126 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 49

Conread position: 63-188
Cow position: chr29:5218024-5217898 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 58

Conread position: 63-211
Cow position: chr29:34483567-34483420 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 58

Conread position: 64-212
Cow position: chr29:16164374-16164229 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 66-207
Cow position: chr29:4603077-4602928 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 66-212
Cow position: chr29:28087739-28087880 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 67-204
Cow position: chr29:774053-774188 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 70-212
Cow position: chr29:26777076-26777216 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 77-215
Cow position: chr29:31835347-31835477 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 78-192
Cow position: chr29:35663843-35663730 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 78-204
Cow position: chr29:23209402-23209528 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 79-214
Cow position: chr29:6337727-6337859 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 40

Conread position: 82-213
Cow position: chr29:6716434-6716306 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 83-207
Cow position: chr29:9924499-9924372 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 88-227
Cow position: chr29:41844166-41844028 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 30

Conread position: 118-214
Cow position: chr29:7395692-7395596 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.