Cow genome map

Conread name: Emb1-C0005195_B20

Conread position: 262-610
Cow position: chr1:81569324-81568969 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 252

Conread position: 269-608
Cow position: chr1:81290240-81290563 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 273-610
Cow position: chr1:42887536-42887218 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 27

Conread position: 274-594
Cow position: chr1:20204752-20205073 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 274-594
Cow position: chr1:52039364-52039681 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 274-601
Cow position: chr1:82884658-82884343 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 274-603
Cow position: chr1:98551444-98551772 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 274-607
Cow position: chr1:81613112-81613445 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 278

Conread position: 274-608
Cow position: chr1:41056411-41056735 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 274-608
Cow position: chr1:57576035-57575707 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 12

Conread position: 274-608
Cow position: chr1:72304643-72304331 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 29

Conread position: 274-608
Cow position: chr1:85028688-85029010 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 47

Conread position: 274-608
Cow position: chr1:89349704-89350022 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 107

Conread position: 274-608
Cow position: chr1:101634428-101634769 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 115

Conread position: 275-594
Cow position: chr1:3167338-3167030 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 46

Conread position: 276-610
Cow position: chr1:78091761-78092096 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 119

Conread position: 287-608
Cow position: chr1:80899848-80900177 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 290-603
Cow position: chr1:56618933-56618598 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 48, 35

Conread position: 290-607
Cow position: chr1:84812193-84811883 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 162

Conread position: 291-608
Cow position: chr1:45555106-45555423 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 30

Conread position: 293-603
Cow position: chr1:197256-196953 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 294-608
Cow position: chr1:5135944-5135653 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 31

Conread position: 295-606
Cow position: chr1:78810784-78811093 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 296-607
Cow position: chr1:47233726-47233422 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 98

Conread position: 296-608
Cow position: chr1:43505272-43505586 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 87

Conread position: 297-607
Cow position: chr1:74822201-74822503 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 173

Conread position: 302-594
Cow position: chr1:71253799-71253510 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 99

Conread position: 302-603
Cow position: chr1:70538359-70538663 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 253

Conread position: 302-608
Cow position: chr1:78857566-78857272 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 317-594
Cow position: chr1:55705483-55705203 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 238

Conread position: 328-606
Cow position: chr1:98030696-98030978 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 123

Conread position: 338-608
Cow position: chr1:12464871-12464607 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 176, 60

Conread position: 357-604
Cow position: chr1:58754973-58754741 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 27

Conread position: 360-608
Cow position: chr1:6788475-6788226 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 156, 171

Conread position: 375-606
Cow position: chr1:12978506-12978737 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 139, 177

Conread position: 376-607
Cow position: chr1:89381101-89381331 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 0

Conread position: 381-606
Cow position: chr1:88913149-88913375 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 138

Conread position: 383-594
Cow position: chr1:86110898-86110694 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 135

Conread position: 385-608
Cow position: chr1:89508392-89508606 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 129, 0

Conread position: 385-608
Cow position: chr1:96277219-96276995 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 140

Conread position: 387-605
Cow position: chr1:85647944-85647726 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 129, 165

Conread position: 387-606
Cow position: chr1:3882627-3882404 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 104

Conread position: 390-608
Cow position: chr1:42175565-42175784 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 186, 134

Conread position: 396-608
Cow position: chr1:86682716-86682503 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 157

Conread position: 396-608
Cow position: chr1:87197674-87197877 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 130, 69

Conread position: 405-607
Cow position: chr1:8129111-8128912 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 58

Conread position: 406-608
Cow position: chr1:87440325-87440525 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 79

Conread position: 413-594
Cow position: chr1:101860625-101860444 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 91

Conread position: 427-608
Cow position: chr1:20104146-20104323 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 473-607
Cow position: chr1:77232650-77232522 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.