Cow genome map
Conread name: | Emb1-C0005195_B20 |
Conread position: | 262-610 |
Cow position: | chr1:81569324-81568969 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 252 |
Conread position: | 269-608 |
Cow position: | chr1:81290240-81290563 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 102 |
Conread position: | 273-610 |
Cow position: | chr1:42887536-42887218 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 27 |
Conread position: | 274-594 |
Cow position: | chr1:20204752-20205073 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 131 |
Conread position: | 274-594 |
Cow position: | chr1:52039364-52039681 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 47 |
Conread position: | 274-601 |
Cow position: | chr1:82884658-82884343 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 47 |
Conread position: | 274-603 |
Cow position: | chr1:98551444-98551772 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 30 |
Conread position: | 274-607 |
Cow position: | chr1:81613112-81613445 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 278 |
Conread position: | 274-608 |
Cow position: | chr1:41056411-41056735 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 88 |
Conread position: | 274-608 |
Cow position: | chr1:57576035-57575707 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 12 |
Conread position: | 274-608 |
Cow position: | chr1:72304643-72304331 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 29 |
Conread position: | 274-608 |
Cow position: | chr1:85028688-85029010 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 235 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 30, 47 |
Conread position: | 274-608 |
Cow position: | chr1:89349704-89350022 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 30, 107 |
Conread position: | 274-608 |
Cow position: | chr1:101634428-101634769 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 115 |
Conread position: | 275-594 |
Cow position: | chr1:3167338-3167030 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 46 |
Conread position: | 276-610 |
Cow position: | chr1:78091761-78092096 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 239 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 28, 119 |
Conread position: | 287-608 |
Cow position: | chr1:80899848-80900177 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 34 |
Conread position: | 290-603 |
Cow position: | chr1:56618933-56618598 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 48, 35 |
Conread position: | 290-607 |
Cow position: | chr1:84812193-84811883 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 162 |
Conread position: | 291-608 |
Cow position: | chr1:45555106-45555423 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 231 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 13, 30 |
Conread position: | 293-603 |
Cow position: | chr1:197256-196953 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 294-608 |
Cow position: | chr1:5135944-5135653 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 10, 31 |
Conread position: | 295-606 |
Cow position: | chr1:78810784-78811093 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 26 |
Conread position: | 296-607 |
Cow position: | chr1:47233726-47233422 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 98 |
Conread position: | 296-608 |
Cow position: | chr1:43505272-43505586 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 87 |
Conread position: | 297-607 |
Cow position: | chr1:74822201-74822503 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 173 |
Conread position: | 302-594 |
Cow position: | chr1:71253799-71253510 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 99 |
Conread position: | 302-603 |
Cow position: | chr1:70538359-70538663 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 253 |
Conread position: | 302-608 |
Cow position: | chr1:78857566-78857272 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 18 |
Conread position: | 317-594 |
Cow position: | chr1:55705483-55705203 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 238 |
Conread position: | 328-606 |
Cow position: | chr1:98030696-98030978 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 9, 123 |
Conread position: | 338-608 |
Cow position: | chr1:12464871-12464607 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 191 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 176, 60 |
Conread position: | 357-604 |
Cow position: | chr1:58754973-58754741 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 157, 27 |
Conread position: | 360-608 |
Cow position: | chr1:6788475-6788226 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 156, 171 |
Conread position: | 375-606 |
Cow position: | chr1:12978506-12978737 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 139, 177 |
Conread position: | 376-607 |
Cow position: | chr1:89381101-89381331 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 381-606 |
Cow position: | chr1:88913149-88913375 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 159 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 30, 138 |
Conread position: | 383-594 |
Cow position: | chr1:86110898-86110694 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 169 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 15, 135 |
Conread position: | 385-608 |
Cow position: | chr1:89508392-89508606 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 385-608 |
Cow position: | chr1:96277219-96276995 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 92, 140 |
Conread position: | 387-605 |
Cow position: | chr1:85647944-85647726 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 167 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 129, 165 |
Conread position: | 387-606 |
Cow position: | chr1:3882627-3882404 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 133, 104 |
Conread position: | 390-608 |
Cow position: | chr1:42175565-42175784 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 186, 134 |
Conread position: | 396-608 |
Cow position: | chr1:86682716-86682503 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 166 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 76, 157 |
Conread position: | 396-608 |
Cow position: | chr1:87197674-87197877 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 130, 69 |
Conread position: | 405-607 |
Cow position: | chr1:8129111-8128912 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 122, 58 |
Conread position: | 406-608 |
Cow position: | chr1:87440325-87440525 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 169 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 108, 79 |
Conread position: | 413-594 |
Cow position: | chr1:101860625-101860444 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 133 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 120, 91 |
Conread position: | 427-608 |
Cow position: | chr1:20104146-20104323 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 473-607 |
Cow position: | chr1:77232650-77232522 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.