Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 264-582 |
| Cow position: | chr13:10928715-10929033 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 264-608 |
| Cow position: | chr13:22085482-22085812 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 270-608 |
| Cow position: | chr13:15234179-15233860 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 274-594 |
| Cow position: | chr13:20666123-20666441 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-604 |
| Cow position: | chr13:12990110-12989788 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 274-608 |
| Cow position: | chr13:971633-971963 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 274-608 |
| Cow position: | chr13:25817778-25817461 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 274-608 |
| Cow position: | chr13:31814132-31813810 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 274-608 |
| Cow position: | chr13:35525949-35526267 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 274-608 |
| Cow position: | chr13:41807040-41806706 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr13:51528181-51528509 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 274-608 |
| Cow position: | chr13:61976700-61977026 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 274-609 |
| Cow position: | chr13:54702455-54702119 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 279 |
| Conread position: | 275-594 |
| Cow position: | chr13:34281944-34281623 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 279 |
| Conread position: | 276-608 |
| Cow position: | chr13:40943506-40943177 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 280-608 |
| Cow position: | chr13:21287831-21288151 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 118 |
| Conread position: | 280-608 |
| Cow position: | chr13:47007479-47007785 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 288-594 |
| Cow position: | chr13:37521129-37521428 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 106 |
| Conread position: | 290-608 |
| Cow position: | chr13:20784837-20784524 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 290-608 |
| Cow position: | chr13:23479278-23478964 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 291-608 |
| Cow position: | chr13:15884766-15885088 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 293-588 |
| Cow position: | chr13:52922334-52922049 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 293-604 |
| Cow position: | chr13:30693947-30693652 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 293-610 |
| Cow position: | chr13:45022962-45023277 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 294-593 |
| Cow position: | chr13:20880681-20880981 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 295-583 |
| Cow position: | chr13:53566840-53566553 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 296-610 |
| Cow position: | chr13:23667504-23667185 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 297-594 |
| Cow position: | chr13:48037861-48037568 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 299-594 |
| Cow position: | chr13:24586286-24585991 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 170 |
| Conread position: | 302-608 |
| Cow position: | chr13:55315953-55316257 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 302-610 |
| Cow position: | chr13:13176885-13176582 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 309-610 |
| Cow position: | chr13:43480290-43479992 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 311-608 |
| Cow position: | chr13:17439539-17439834 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 242 |
| Conread position: | 317-609 |
| Cow position: | chr13:13320997-13320730 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 372-606 |
| Cow position: | chr13:15903182-15902960 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 376-609 |
| Cow position: | chr13:54583042-54582805 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 390-608 |
| Cow position: | chr13:54388870-54389087 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 33 |
| Conread position: | 392-607 |
| Cow position: | chr13:18696991-18696775 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 395-602 |
| Cow position: | chr13:8374626-8374833 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 127, 157 |
| Conread position: | 396-610 |
| Cow position: | chr13:18058104-18058318 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 413-608 |
| Cow position: | chr13:15144244-15144432 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 413-608 |
| Cow position: | chr13:20217260-20217464 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 149 |
| Conread position: | 422-609 |
| Cow position: | chr13:15194613-15194802 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 423-606 |
| Cow position: | chr13:21135782-21135965 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 129 |
Show alignments to all cow chromosomes.