Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 261-608 |
| Cow position: | chr16:48956510-48956850 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 262-588 |
| Cow position: | chr16:24147863-24148193 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 264-608 |
| Cow position: | chr16:48340982-48340642 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 269-608 |
| Cow position: | chr16:23730221-23729872 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 272-608 |
| Cow position: | chr16:52835159-52834836 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 274-608 |
| Cow position: | chr16:4626674-4626339 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr16:33645734-33646067 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 274-608 |
| Cow position: | chr16:39394297-39394621 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 274-608 |
| Cow position: | chr16:42079119-42078796 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-610 |
| Cow position: | chr16:7504820-7505143 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 274-610 |
| Cow position: | chr16:33226812-33226485 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 274-610 |
| Cow position: | chr16:48096043-48095711 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 275-608 |
| Cow position: | chr16:40561947-40562284 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 280-592 |
| Cow position: | chr16:39616470-39616760 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 287-610 |
| Cow position: | chr16:11105291-11105608 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 293-594 |
| Cow position: | chr16:45139409-45139709 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 293-608 |
| Cow position: | chr16:48006751-48006441 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 294-607 |
| Cow position: | chr16:16597302-16597608 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 302-603 |
| Cow position: | chr16:13752374-13752085 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 302-603 |
| Cow position: | chr16:50873425-50873123 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 302-608 |
| Cow position: | chr16:33704547-33704857 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 257 |
| Conread position: | 315-608 |
| Cow position: | chr16:25839380-25839672 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 343-610 |
| Cow position: | chr16:14124947-14125192 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 178, 47 |
| Conread position: | 357-608 |
| Cow position: | chr16:45677780-45678030 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 369-608 |
| Cow position: | chr16:17288758-17288999 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 25 |
| Conread position: | 382-605 |
| Cow position: | chr16:1725258-1725024 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 396-608 |
| Cow position: | chr16:17945362-17945573 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 404-607 |
| Cow position: | chr16:47964967-47964768 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 431-608 |
| Cow position: | chr16:39402123-39401962 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 441-608 |
| Cow position: | chr16:17903764-17903593 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 447-608 |
| Cow position: | chr16:45121930-45122087 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 454-608 |
| Cow position: | chr16:21039926-21040079 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 41 |
Show alignments to all cow chromosomes.