Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 262-608 |
| Cow position: | chr17:18472929-18473255 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 264-603 |
| Cow position: | chr17:21115197-21114867 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 270-608 |
| Cow position: | chr17:28285269-28284936 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 274-594 |
| Cow position: | chr17:21004070-21003748 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 274-594 |
| Cow position: | chr17:29715425-29715120 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 117 |
| Conread position: | 274-603 |
| Cow position: | chr17:18592200-18592529 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 196 |
| Conread position: | 274-606 |
| Cow position: | chr17:33288893-33288567 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 274-608 |
| Cow position: | chr17:24553765-24554088 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 194 |
| Conread position: | 274-608 |
| Cow position: | chr17:25900960-25901292 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 274-608 |
| Cow position: | chr17:32989254-32989568 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 274-608 |
| Cow position: | chr17:32993852-32993532 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 274-610 |
| Cow position: | chr17:26818691-26818364 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 275-608 |
| Cow position: | chr17:11664826-11664493 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 277-608 |
| Cow position: | chr17:32138636-32138332 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 286-607 |
| Cow position: | chr17:11172843-11172524 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 287-610 |
| Cow position: | chr17:5423297-5422975 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 290-594 |
| Cow position: | chr17:18109309-18109006 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 290-603 |
| Cow position: | chr17:15103111-15102807 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 177 |
| Conread position: | 290-608 |
| Cow position: | chr17:1410464-1410146 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 295-606 |
| Cow position: | chr17:5767696-5767997 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 295-609 |
| Cow position: | chr17:24004177-24004465 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 296-607 |
| Cow position: | chr17:17405921-17406226 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 297-608 |
| Cow position: | chr17:4225706-4225408 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 297-608 |
| Cow position: | chr17:33933953-33933653 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 7, 91 |
| Conread position: | 316-607 |
| Cow position: | chr17:24824056-24824333 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 322-609 |
| Cow position: | chr17:12536658-12536372 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 330-602 |
| Cow position: | chr17:3577356-3577625 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 8, 161 |
| Conread position: | 347-608 |
| Cow position: | chr17:4106150-4105902 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 183, 49 |
| Conread position: | 347-608 |
| Cow position: | chr17:4121886-4121638 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 174, 49 |
| Conread position: | 353-608 |
| Cow position: | chr17:31037538-31037285 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 173, 43 |
| Conread position: | 357-608 |
| Cow position: | chr17:4967956-4968204 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 170, 119 |
| Conread position: | 391-608 |
| Cow position: | chr17:33658190-33657976 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 158, 15 |
| Conread position: | 413-593 |
| Cow position: | chr17:21325231-21325409 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 447-603 |
| Cow position: | chr17:40638882-40639034 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 468-608 |
| Cow position: | chr17:22017134-22016992 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 472-602 |
| Cow position: | chr17:25800925-25800795 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 79 |
Show alignments to all cow chromosomes.