Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 248-608 |
| Cow position: | chr2:46189399-46189044 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 77 |
| Conread position: | 261-608 |
| Cow position: | chr2:59953148-59952807 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 264-608 |
| Cow position: | chr2:1352401-1352072 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 266-603 |
| Cow position: | chr2:33554446-33554123 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 270-608 |
| Cow position: | chr2:53649743-53650076 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 274-591 |
| Cow position: | chr2:40403300-40402992 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 274-594 |
| Cow position: | chr2:77157633-77157307 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 284 |
| Conread position: | 274-606 |
| Cow position: | chr2:18997459-18997769 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 274-606 |
| Cow position: | chr2:36056076-36055749 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 274-606 |
| Cow position: | chr2:38965342-38965670 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 274-606 |
| Cow position: | chr2:45499476-45499152 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 274-606 |
| Cow position: | chr2:46227189-46227509 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 274-607 |
| Cow position: | chr2:32114786-32115131 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 274-608 |
| Cow position: | chr2:11806040-11806371 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 274-608 |
| Cow position: | chr2:44170277-44170611 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 213 |
| Conread position: | 274-608 |
| Cow position: | chr2:52344483-52344803 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-610 |
| Cow position: | chr2:971566-971878 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 274-610 |
| Cow position: | chr2:69747903-69747562 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 276-608 |
| Cow position: | chr2:70703977-70704310 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 277-594 |
| Cow position: | chr2:13001535-13001837 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 287-594 |
| Cow position: | chr2:549582-549289 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 287-608 |
| Cow position: | chr2:24434551-24434228 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 290-594 |
| Cow position: | chr2:61974531-61974838 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 265 |
| Conread position: | 291-608 |
| Cow position: | chr2:19493951-19494266 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 291-608 |
| Cow position: | chr2:41248306-41248623 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 292-607 |
| Cow position: | chr2:58074608-58074293 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 294-608 |
| Cow position: | chr2:84480778-84480449 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 273 |
| Conread position: | 295-594 |
| Cow position: | chr2:13684448-13684737 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 295-603 |
| Cow position: | chr2:77467715-77467401 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 183 |
| Conread position: | 298-608 |
| Cow position: | chr2:75600457-75600774 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 302-603 |
| Cow position: | chr2:991922-992202 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 303-608 |
| Cow position: | chr2:45665784-45666085 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 304-600 |
| Cow position: | chr2:53851185-53851481 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 307-608 |
| Cow position: | chr2:46330811-46331115 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 248 |
| Conread position: | 314-594 |
| Cow position: | chr2:11599202-11599463 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 320-603 |
| Cow position: | chr2:72183722-72183445 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 352-608 |
| Cow position: | chr2:1638399-1638655 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 201 |
| Conread position: | 357-591 |
| Cow position: | chr2:29121692-29121918 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 357-608 |
| Cow position: | chr2:827805-827559 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 381-606 |
| Cow position: | chr2:30144552-30144766 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 381-608 |
| Cow position: | chr2:46247633-46247409 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 153, 135 |
| Conread position: | 385-606 |
| Cow position: | chr2:46351935-46351732 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 385-608 |
| Cow position: | chr2:25448161-25448380 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 399-608 |
| Cow position: | chr2:45542551-45542347 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 402-608 |
| Cow position: | chr2:7573653-7573453 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 411-608 |
| Cow position: | chr2:17842119-17841936 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 414-608 |
| Cow position: | chr2:17805904-17805710 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 418-608 |
| Cow position: | chr2:47147772-47147961 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 434-608 |
| Cow position: | chr2:44222701-44222876 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 119 |
Show alignments to all cow chromosomes.