Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 254-610 |
| Cow position: | chr22:31646191-31646542 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 164 |
| Conread position: | 255-607 |
| Cow position: | chr22:3993309-3993657 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 261-607 |
| Cow position: | chr22:4043637-4043980 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 261-608 |
| Cow position: | chr22:18021317-18020984 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 264-607 |
| Cow position: | chr22:3251282-3250947 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 265-608 |
| Cow position: | chr22:4061231-4060899 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 268-594 |
| Cow position: | chr22:14245707-14245407 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 269-607 |
| Cow position: | chr22:10567975-10567667 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 274-584 |
| Cow position: | chr22:28370663-28370970 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 274-594 |
| Cow position: | chr22:18258945-18259256 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 274-600 |
| Cow position: | chr22:41271273-41270961 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 274-603 |
| Cow position: | chr22:18837974-18838295 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 274-603 |
| Cow position: | chr22:41971436-41971111 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 274-607 |
| Cow position: | chr22:4645494-4645820 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 274-608 |
| Cow position: | chr22:877240-877563 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:4119851-4119514 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 274-608 |
| Cow position: | chr22:8323965-8324287 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:10532213-10532548 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 274-608 |
| Cow position: | chr22:10631092-10631434 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:13300137-13300459 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:15039468-15039136 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 274-608 |
| Cow position: | chr22:17152396-17152725 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 274-608 |
| Cow position: | chr22:22160438-22160774 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:29290419-29290091 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr22:30698898-30699229 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 274-608 |
| Cow position: | chr22:43397736-43398050 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 274-610 |
| Cow position: | chr22:17764092-17764429 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 275-608 |
| Cow position: | chr22:38439440-38439109 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 187 |
| Conread position: | 276-606 |
| Cow position: | chr22:10161684-10162013 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 277-593 |
| Cow position: | chr22:4017195-4017510 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 284-608 |
| Cow position: | chr22:6328035-6327721 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 285-603 |
| Cow position: | chr22:15568291-15567973 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 286-608 |
| Cow position: | chr22:7884720-7885038 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 286-610 |
| Cow position: | chr22:1590748-1591074 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 293-608 |
| Cow position: | chr22:845639-845951 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 306-608 |
| Cow position: | chr22:17950207-17949924 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 317-594 |
| Cow position: | chr22:43812657-43812387 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 332-608 |
| Cow position: | chr22:5616075-5616350 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 196 |
| Conread position: | 350-610 |
| Cow position: | chr22:5675377-5675130 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 392-608 |
| Cow position: | chr22:31510535-31510332 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 396-606 |
| Cow position: | chr22:19173536-19173742 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 402-594 |
| Cow position: | chr22:1874536-1874726 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 115, 63 |
| Conread position: | 403-608 |
| Cow position: | chr22:42635587-42635384 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 415-608 |
| Cow position: | chr22:16095045-16094855 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 418-608 |
| Cow position: | chr22:34631996-34632183 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 69 |
| Conread position: | 426-607 |
| Cow position: | chr22:19827998-19827816 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 77 |
Show alignments to all cow chromosomes.