Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 261-603 |
| Cow position: | chr3:55190066-55189732 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 264-608 |
| Cow position: | chr3:78076876-78077212 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 216 |
| Conread position: | 269-606 |
| Cow position: | chr3:7338089-7337757 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 203 |
| Conread position: | 270-594 |
| Cow position: | chr3:13353054-13353377 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 274-607 |
| Cow position: | chr3:80071814-80072155 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr3:49327643-49327971 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 274-608 |
| Cow position: | chr3:50768376-50768706 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chr3:61225038-61224717 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 274-608 |
| Cow position: | chr3:69751004-69750683 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 274-609 |
| Cow position: | chr3:59798951-59799276 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 274-610 |
| Cow position: | chr3:26219364-26219022 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 274-610 |
| Cow position: | chr3:70566041-70565709 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 276-608 |
| Cow position: | chr3:10958529-10958213 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 287-608 |
| Cow position: | chr3:56059517-56059838 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 288-603 |
| Cow position: | chr3:80564675-80564988 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 290-610 |
| Cow position: | chr3:74533061-74533378 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 194 |
| Conread position: | 293-603 |
| Cow position: | chr3:9641280-9641589 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 293-606 |
| Cow position: | chr3:17937123-17936814 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 173 |
| Conread position: | 295-608 |
| Cow position: | chr3:15506166-15506475 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 299-603 |
| Cow position: | chr3:55836105-55835799 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 302-607 |
| Cow position: | chr3:38863839-38864151 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 101 |
| Conread position: | 302-607 |
| Cow position: | chr3:74233926-74234212 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 314-608 |
| Cow position: | chr3:75080504-75080790 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 317-608 |
| Cow position: | chr3:52607924-52608209 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 320-608 |
| Cow position: | chr3:13507207-13507495 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 327-608 |
| Cow position: | chr3:44932259-44932543 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 228 |
| Conread position: | 327-608 |
| Cow position: | chr3:78092754-78092484 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 193, 32 |
| Conread position: | 341-608 |
| Cow position: | chr3:68156496-68156749 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 362-594 |
| Cow position: | chr3:70609409-70609645 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 117 |
| Conread position: | 385-602 |
| Cow position: | chr3:116003-116210 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 385-608 |
| Cow position: | chr3:23105560-23105335 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 133 |
| Conread position: | 391-594 |
| Cow position: | chr3:56523616-56523429 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 404-594 |
| Cow position: | chr3:19585687-19585877 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 410-608 |
| Cow position: | chr3:60264884-60264689 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 412-608 |
| Cow position: | chr3:55109782-55109586 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 414-608 |
| Cow position: | chr3:48073039-48072855 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 100, 44 |
| Conread position: | 427-608 |
| Cow position: | chr3:55177905-55177719 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 429-594 |
| Cow position: | chr3:79196609-79196772 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 433-608 |
| Cow position: | chr3:3883965-3883788 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.