Cow genome map

Conread name: Emb1-C0005195_B20

Conread position: 261-603
Cow position: chr4:20328015-20327671 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 106

Conread position: 264-594
Cow position: chr4:19497547-19497233 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 119

Conread position: 269-606
Cow position: chr4:53208009-53208335 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 274-593
Cow position: chr4:48152656-48152342 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 274-603
Cow position: chr4:24002256-24001926 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 274-606
Cow position: chr4:3687641-3687964 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 130

Conread position: 274-606
Cow position: chr4:19597600-19597282 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 274-606
Cow position: chr4:47730583-47730900 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 13

Conread position: 274-607
Cow position: chr4:42424088-42423762 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 274-608
Cow position: chr4:38952272-38952597 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 50

Conread position: 274-608
Cow position: chr4:53100519-53100845 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 274-610
Cow position: chr4:11872199-11871876 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 219

Conread position: 274-610
Cow position: chr4:17112165-17111828 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 115

Conread position: 274-610
Cow position: chr4:19434974-19435301 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 285-574
Cow position: chr4:37470275-37470562 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 18, 77

Conread position: 286-594
Cow position: chr4:34337537-34337239 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 39

Conread position: 288-608
Cow position: chr4:20298996-20299319 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 148

Conread position: 290-608
Cow position: chr4:21064768-21065080 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 291-610
Cow position: chr4:28772337-28772021 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 103

Conread position: 292-606
Cow position: chr4:46550115-46550422 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 189

Conread position: 293-608
Cow position: chr4:20139787-20139471 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 299-610
Cow position: chr4:10378837-10379156 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 21

Conread position: 302-594
Cow position: chr4:65919360-65919641 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 302-606
Cow position: chr4:27529855-27530160 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 251

Conread position: 304-594
Cow position: chr4:42922102-42921827 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 83

Conread position: 311-608
Cow position: chr4:58881215-58880917 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 313-608
Cow position: chr4:21233118-21232830 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 62

Conread position: 315-608
Cow position: chr4:61897784-61897491 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 323-607
Cow position: chr4:4319388-4319109 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 15, 109

Conread position: 328-602
Cow position: chr4:19463258-19463534 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 226

Conread position: 330-608
Cow position: chr4:25356536-25356274 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 8, 95

Conread position: 342-608
Cow position: chr4:38935141-38935403 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 60

Conread position: 361-603
Cow position: chr4:3689510-3689743 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 152, 19

Conread position: 361-606
Cow position: chr4:17774548-17774308 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 118, 8

Conread position: 362-608
Cow position: chr4:13344344-13344582 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 106

Conread position: 410-594
Cow position: chr4:44449659-44449476 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 6

Conread position: 416-608
Cow position: chr4:20027248-20027059 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 50

Conread position: 416-608
Cow position: chr4:30169970-30169785 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 417-608
Cow position: chr4:54927586-54927396 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 46

Conread position: 425-603
Cow position: chr4:25537407-25537586 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 0

Show alignments to all cow chromosomes.