Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 264-519 |
| Cow position: | chr5:28330596-28330345 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 264-605 |
| Cow position: | chr5:25231278-25230935 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 212 |
| Conread position: | 274-601 |
| Cow position: | chr5:46510122-46509795 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 274-603 |
| Cow position: | chr5:9894381-9894051 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 274-603 |
| Cow position: | chr5:15598488-15598163 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 274-606 |
| Cow position: | chr5:64139309-64139635 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-607 |
| Cow position: | chr5:45845947-45845615 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 274-607 |
| Cow position: | chr5:58793869-58793531 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 146 |
| Conread position: | 274-608 |
| Cow position: | chr5:21617201-21617535 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 274-608 |
| Cow position: | chr5:29903776-29903446 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 274-608 |
| Cow position: | chr5:50599812-50600124 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 275-608 |
| Cow position: | chr5:57935366-57935031 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 276-610 |
| Cow position: | chr5:5111329-5110995 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 150 |
| Conread position: | 279-609 |
| Cow position: | chr5:21828614-21828946 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 290-603 |
| Cow position: | chr5:40109263-40109565 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 293-608 |
| Cow position: | chr5:30253510-30253818 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 293-610 |
| Cow position: | chr5:37814388-37814705 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 302-601 |
| Cow position: | chr5:27154797-27155086 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 302-601 |
| Cow position: | chr5:56070628-56070929 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 252 |
| Conread position: | 314-608 |
| Cow position: | chr5:45803847-45804137 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 323-608 |
| Cow position: | chr5:50943359-50943080 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 205 |
| Conread position: | 332-608 |
| Cow position: | chr5:44447082-44446788 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 238 |
| Conread position: | 336-594 |
| Cow position: | chr5:69461144-69461396 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 185, 53 |
| Conread position: | 337-608 |
| Cow position: | chr5:48010036-48009782 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 161, 61 |
| Conread position: | 348-594 |
| Cow position: | chr5:44028480-44028241 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 175, 41 |
| Conread position: | 362-606 |
| Cow position: | chr5:30629322-30629084 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 24 |
| Conread position: | 370-608 |
| Cow position: | chr5:42050391-42050629 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 151, 123 |
| Conread position: | 385-594 |
| Cow position: | chr5:70952021-70951817 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 408-606 |
| Cow position: | chr5:50799418-50799609 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 68 |
Show alignments to all cow chromosomes.