Cow genome map
| Conread name: | Emb1-C0005195_B20 |
| Conread position: | 261-596 |
| Cow position: | chrX:7695494-7695817 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 261-608 |
| Cow position: | chrX:13648053-13647707 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 261-610 |
| Cow position: | chrX:37232143-37232487 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 203 |
| Conread position: | 274-594 |
| Cow position: | chrX:6413793-6414111 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 274-594 |
| Cow position: | chrX:6544003-6544321 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 274-594 |
| Cow position: | chrX:40269223-40269555 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 290 |
| Conread position: | 274-603 |
| Cow position: | chrX:24424646-24424328 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 274-608 |
| Cow position: | chrX:34376704-34377020 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 274-608 |
| Cow position: | chrX:34532278-34532598 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 274-609 |
| Cow position: | chrX:14884217-14883877 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 282 |
| Conread position: | 275-603 |
| Cow position: | chrX:678820-678482 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 157 |
| Conread position: | 283-608 |
| Cow position: | chrX:11655842-11656159 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 237 |
| Conread position: | 287-594 |
| Cow position: | chrX:17794745-17795045 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 294-608 |
| Cow position: | chrX:9201314-9201626 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 297-608 |
| Cow position: | chrX:42381330-42381034 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 111 |
| Conread position: | 320-608 |
| Cow position: | chrX:38852990-38853275 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 324-608 |
| Cow position: | chrX:37781320-37781031 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 233 |
| Conread position: | 385-608 |
| Cow position: | chrX:34313889-34314102 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 397-608 |
| Cow position: | chrX:40685463-40685250 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 398-608 |
| Cow position: | chrX:19273854-19273629 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 398-609 |
| Cow position: | chrX:34505178-34504970 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 69 |
| Conread position: | 409-594 |
| Cow position: | chrX:26881688-26881501 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 111, 145 |
| Conread position: | 415-608 |
| Cow position: | chrX:42927933-42927746 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 427-608 |
| Cow position: | chrX:34837156-34836986 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 437-607 |
| Cow position: | chrX:1466069-1466239 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 115 |
| Conread position: | 438-594 |
| Cow position: | chrX:29050156-29050314 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 117 |
| Conread position: | 465-610 |
| Cow position: | chrX:46429884-46429739 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 20 |
Show alignments to all cow chromosomes.