Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 1-238
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 94

Conread position: 1-299
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 10

Conread position: 2-661
Cow position:
Alignm length: 694
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 110

Conread position: 3-237
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-260
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 106

Conread position: 3-577
Cow position:
Alignm length: 601
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 3-598
Cow position:
Alignm length: 625
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 370

Conread position: 3-607
Cow position:
Alignm length: 645
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-659
Cow position:
Alignm length: 687
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 369

Conread position: 3-659
Cow position:
Alignm length: 689
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 194

Conread position: 3-661
Cow position:
Alignm length: 696
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 372

Conread position: 3-661
Cow position:
Alignm length: 686
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 3-661
Cow position:
Alignm length: 698
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 689
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 374

Conread position: 3-661
Cow position:
Alignm length: 685
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 121

Conread position: 3-661
Cow position:
Alignm length: 702
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 222

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 692
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 226

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 3-661
Cow position:
Alignm length: 684
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-661
Cow position:
Alignm length: 681
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 541

Conread position: 3-661
Cow position:
Alignm length: 679
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 3-661
Cow position:
Alignm length: 673
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 70

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 177

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 3-661
Cow position:
Alignm length: 696
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 548

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 212

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 186

Conread position: 3-662
Cow position:
Alignm length: 701
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 4-285
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 30, 15

Conread position: 4-611
Cow position:
Alignm length: 620
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 4-661
Cow position:
Alignm length: 689
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 197

Conread position: 4-661
Cow position:
Alignm length: 684
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 120

Conread position: 4-661
Cow position:
Alignm length: 695
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 5-360
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 5-372
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 156

Conread position: 5-471
Cow position:
Alignm length: 491
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 5-583
Cow position:
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 393

Conread position: 5-649
Cow position:
Alignm length: 659
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 5-659
Cow position:
Alignm length: 664
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 60

Conread position: 5-659
Cow position:
Alignm length: 664
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 60

Conread position: 5-661
Cow position:
Alignm length: 690
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 268

Conread position: 5-661
Cow position:
Alignm length: 676
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 106

Conread position: 11-662
Cow position:
Alignm length: 676
Alignm identity: 427
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 118

Conread position: 16-661
Cow position:
Alignm length: 695
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 96

Conread position: 17-526
Cow position:
Alignm length: 530
Alignm identity: 348
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 90

Conread position: 17-661
Cow position:
Alignm length: 681
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 537

Conread position: 17-661
Cow position:
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 535

Conread position: 17-661
Cow position:
Alignm length: 681
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 18-603
Cow position:
Alignm length: 617
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 357

Conread position: 18-609
Cow position:
Alignm length: 603
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 18-661
Cow position:
Alignm length: 693
Alignm identity: 448
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 37

Conread position: 18-661
Cow position:
Alignm length: 679
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 106

Conread position: 18-661
Cow position:
Alignm length: 677
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 203

Conread position: 18-661
Cow position:
Alignm length: 678
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 107

Conread position: 18-661
Cow position:
Alignm length: 687
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 497

Conread position: 18-661
Cow position:
Alignm length: 681
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 337

Conread position: 18-662
Cow position:
Alignm length: 681
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 107

Conread position: 18-662
Cow position:
Alignm length: 667
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 93

Conread position: 18-662
Cow position:
Alignm length: 656
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 36

Conread position: 19-661
Cow position:
Alignm length: 681
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 106

Conread position: 19-661
Cow position:
Alignm length: 665
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 88

Conread position: 19-662
Cow position:
Alignm length: 666
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 24-661
Cow position:
Alignm length: 672
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 353

Conread position: 32-647
Cow position:
Alignm length: 650
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 78

Conread position: 33-531
Cow position:
Alignm length: 516
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 77

Conread position: 33-661
Cow position:
Alignm length: 655
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 33-662
Cow position:
Alignm length: 659
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 72

Conread position: 34-357
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 107, 38

Conread position: 34-461
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 63, 160

Conread position: 46-655
Cow position:
Alignm length: 631
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 63

Conread position: 68-567
Cow position:
Alignm length: 528
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 5

Conread position: 82-430
Cow position:
Alignm length: 371
Alignm identity: 259
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 106, 20

Conread position: 82-466
Cow position:
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 22

Conread position: 82-661
Cow position:
Alignm length: 604
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 37

Conread position: 87-661
Cow position:
Alignm length: 593
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 94-661
Cow position:
Alignm length: 586
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 317

Conread position: 114-661
Cow position:
Alignm length: 565
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 114-661
Cow position:
Alignm length: 566
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 114-661
Cow position:
Alignm length: 573
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 430

Conread position: 114-661
Cow position:
Alignm length: 568
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 115-661
Cow position:
Alignm length: 563
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 121-524
Cow position:
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 104

Conread position: 121-661
Cow position:
Alignm length: 558
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 415

Conread position: 124-661
Cow position:
Alignm length: 555
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 130-661
Cow position:
Alignm length: 546
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 73

Conread position: 130-661
Cow position:
Alignm length: 550
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 407

Conread position: 133-649
Cow position:
Alignm length: 532
Alignm identity: 339
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 78, 35

Conread position: 144-661
Cow position:
Alignm length: 534
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 393

Conread position: 146-661
Cow position:
Alignm length: 532
Alignm identity: 336
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 32

Conread position: 152-662
Cow position:
Alignm length: 539
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 433

Conread position: 154-660
Cow position:
Alignm length: 535
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 357

Conread position: 165-662
Cow position:
Alignm length: 517
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 174-655
Cow position:
Alignm length: 495
Alignm identity: 316
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 174

Conread position: 185-616
Cow position:
Alignm length: 443
Alignm identity: 287
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 33

Conread position: 206-609
Cow position:
Alignm length: 412
Alignm identity: 262
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 44

Conread position: 208-525
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 134

Conread position: 212-661
Cow position:
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 227

Conread position: 216-661
Cow position:
Alignm length: 468
Alignm identity: 303
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 133

Conread position: 258-661
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 260-633
Cow position:
Alignm length: 385
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 134

Conread position: 288-661
Cow position:
Alignm length: 383
Alignm identity: 246
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 16

Conread position: 288-662
Cow position:
Alignm length: 379
Alignm identity: 238
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 90, 32

Conread position: 296-615
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 8

Conread position: 320-661
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 202

Conread position: 355-661
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 211

Conread position: 367-661
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 156

Conread position: 370-659
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 105, 24

Conread position: 370-660
Cow position:
Alignm length: 295
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 152

Conread position: 370-660
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 152

Conread position: 370-661
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 86

Conread position: 374-662
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 103, 11

Conread position: 378-612
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 97, 145

Conread position: 382-661
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 24

Conread position: 397-661
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 49

Conread position: 403-616
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 120

Conread position: 403-661
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 75, 105

Conread position: 403-661
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 56

Conread position: 404-661
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 74, 249

Conread position: 415-661
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 108

Conread position: 418-662
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 105

Conread position: 428-661
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 71

Conread position: 442-661
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 106

Show alignments to all cow chromosomes.