Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 2-662
Cow position: chr10:29631593-29630900 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 110

Conread position: 3-298
Cow position: chr10:19512787-19513101 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 121

Conread position: 3-328
Cow position: chr10:22583812-22583459 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 91

Conread position: 3-332
Cow position: chr10:28642743-28643097 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 124

Conread position: 3-388
Cow position: chr10:14842988-14843379 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 16

Conread position: 3-437
Cow position: chr10:55285168-55285612 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 300
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 110

Conread position: 3-588
Cow position: chr10:47908140-47908746 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 396
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 109

Conread position: 3-590
Cow position: chr10:20369868-20369292 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 3-598
Cow position: chr10:7280896-7280276 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 269

Conread position: 3-612
Cow position: chr10:57988785-57988152 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-612
Cow position: chr10:62407571-62406939 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 545

Conread position: 3-616
Cow position: chr10:57556129-57555488 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-659
Cow position: chr10:14334639-14333954 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 3-660
Cow position: chr10:55094477-55095157 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position: chr10:1378712-1379390 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 103

Conread position: 3-661
Cow position: chr10:7897276-7896587 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 375

Conread position: 3-661
Cow position: chr10:14805052-14805737 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 365

Conread position: 3-661
Cow position: chr10:19495082-19494395 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-661
Cow position: chr10:19840889-19841573 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 3-661
Cow position: chr10:21488172-21488842 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 3-661
Cow position: chr10:22102443-22103124 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 371

Conread position: 3-661
Cow position: chr10:28256207-28255514 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 3-661
Cow position: chr10:29845438-29844764 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 200

Conread position: 3-661
Cow position: chr10:30684286-30683597 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position: chr10:32701934-32702650 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 427

Conread position: 3-661
Cow position: chr10:38344150-38343472 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position: chr10:39040089-39039422 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 183

Conread position: 3-661
Cow position: chr10:39815192-39814506 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 3-661
Cow position: chr10:41878129-41878818 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 550

Conread position: 4-321
Cow position: chr10:32429938-32430268 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 79

Conread position: 4-356
Cow position: chr10:20375625-20375252 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 4-473
Cow position: chr10:24976567-24976102 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 4-496
Cow position: chr10:24311156-24310659 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 111

Conread position: 4-661
Cow position: chr10:40641170-40641836 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 5-649
Cow position: chr10:28946693-28947339 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Conread position: 5-659
Cow position: chr10:21739539-21738863 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 435
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 107

Conread position: 5-661
Cow position: chr10:48397890-48397225 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 189

Conread position: 5-662
Cow position: chr10:42641801-42642489 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 165

Conread position: 5-662
Cow position: chr10:51782202-51781548 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 116

Conread position: 6-203
Cow position: chr10:15368391-15368182 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 87

Conread position: 6-661
Cow position: chr10:39778906-39778238 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 105

Conread position: 7-659
Cow position: chr10:31524979-31525620 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 427
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 68

Conread position: 10-381
Cow position: chr10:36469236-36468847 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 9

Conread position: 10-661
Cow position: chr10:41158660-41159307 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 111

Conread position: 15-300
Cow position: chr10:64146147-64146450 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 98

Conread position: 16-332
Cow position: chr10:50135792-50136129 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 18-525
Cow position: chr10:11821963-11822508 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 99

Conread position: 18-615
Cow position: chr10:29011431-29010824 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 18-661
Cow position: chr10:37771107-37771772 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 182

Conread position: 19-655
Cow position: chr10:29101495-29100837 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 20-661
Cow position: chr10:38849513-38850160 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 33-593
Cow position: chr10:41387707-41387161 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 67

Conread position: 33-662
Cow position: chr10:64221163-64220558 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 34-659
Cow position: chr10:33870525-33871182 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 340

Conread position: 35-549
Cow position: chr10:47787930-47788459 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 84

Conread position: 82-661
Cow position: chr10:25652134-25651535 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 82-661
Cow position: chr10:54930908-54930330 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 114-661
Cow position: chr10:10172069-10172629 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 118-660
Cow position: chr10:19706302-19705734 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 215

Conread position: 145-643
Cow position: chr10:58376933-58376424 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 346
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 117, 49

Conread position: 148-661
Cow position: chr10:46192513-46193036 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 169-661
Cow position: chr10:25339494-25339990 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 14

Conread position: 259-659
Cow position: chr10:22644485-22644891 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 11

Conread position: 262-660
Cow position: chr10:8325616-8325219 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 86

Conread position: 284-661
Cow position: chr10:23409731-23409356 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 65

Conread position: 297-661
Cow position: chr10:41151207-41150841 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 168

Conread position: 303-661
Cow position: chr10:19143083-19142722 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 63, 47

Conread position: 304-662
Cow position: chr10:31539675-31540016 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 174, 25

Conread position: 335-661
Cow position: chr10:29732304-29732632 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 162

Conread position: 353-660
Cow position: chr10:6258907-6258599 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 39

Conread position: 353-662
Cow position: chr10:24124472-24124168 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 135

Conread position: 355-661
Cow position: chr10:32828459-32828770 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 178

Conread position: 357-628
Cow position: chr10:20515019-20515289 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 12

Conread position: 376-606
Cow position: chr10:6535328-6535556 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 147

Conread position: 385-662
Cow position: chr10:6556151-6556427 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 138

Conread position: 415-616
Cow position: chr10:40150548-40150351 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 103

Conread position: 421-662
Cow position: chr10:3521163-3520924 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 101

Show alignments to all cow chromosomes.