Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 1-661
Cow position:
Alignm length: 698
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 111

Conread position: 3-259
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 13, 77

Conread position: 3-328
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 3-328
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 85

Conread position: 3-356
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 106

Conread position: 3-380
Cow position:
Alignm length: 412
Alignm identity: 276
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 326

Conread position: 3-410
Cow position:
Alignm length: 433
Alignm identity: 272
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 77

Conread position: 3-524
Cow position:
Alignm length: 553
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 373

Conread position: 3-584
Cow position:
Alignm length: 609
Alignm identity: 382
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 110

Conread position: 3-654
Cow position:
Alignm length: 692
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 3-660
Cow position:
Alignm length: 687
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 44

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 361

Conread position: 3-661
Cow position:
Alignm length: 688
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 702
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 3-661
Cow position:
Alignm length: 700
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 530

Conread position: 3-661
Cow position:
Alignm length: 688
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 697
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 123

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 510

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 3-661
Cow position:
Alignm length: 692
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 7

Conread position: 3-661
Cow position:
Alignm length: 709
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 374

Conread position: 3-661
Cow position:
Alignm length: 680
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 681
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 52

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 694
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 124

Conread position: 3-662
Cow position:
Alignm length: 684
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 4-661
Cow position:
Alignm length: 677
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 76

Conread position: 4-661
Cow position:
Alignm length: 692
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 4-661
Cow position:
Alignm length: 692
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 5-260
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 142

Conread position: 5-413
Cow position:
Alignm length: 443
Alignm identity: 289
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 119

Conread position: 5-659
Cow position:
Alignm length: 684
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 356

Conread position: 5-662
Cow position:
Alignm length: 677
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 11-661
Cow position:
Alignm length: 688
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 17-649
Cow position:
Alignm length: 665
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 17-662
Cow position:
Alignm length: 676
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 253

Conread position: 18-612
Cow position:
Alignm length: 624
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 18-655
Cow position:
Alignm length: 672
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 18-661
Cow position:
Alignm length: 691
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 200

Conread position: 18-662
Cow position:
Alignm length: 675
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 18-662
Cow position:
Alignm length: 683
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 187

Conread position: 20-261
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 21-524
Cow position:
Alignm length: 539
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 83

Conread position: 21-661
Cow position:
Alignm length: 686
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 82

Conread position: 23-661
Cow position:
Alignm length: 667
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 26-661
Cow position:
Alignm length: 664
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 27-328
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 111

Conread position: 33-374
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 328

Conread position: 52-661
Cow position:
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 56

Conread position: 82-661
Cow position:
Alignm length: 601
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 20

Conread position: 82-662
Cow position:
Alignm length: 599
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 95-662
Cow position:
Alignm length: 582
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 200

Conread position: 114-275
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 117-661
Cow position:
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 89

Conread position: 119-661
Cow position:
Alignm length: 554
Alignm identity: 342
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 111

Conread position: 121-661
Cow position:
Alignm length: 561
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 130-616
Cow position:
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 46

Conread position: 134-661
Cow position:
Alignm length: 552
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 85

Conread position: 140-300
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 89

Conread position: 159-596
Cow position:
Alignm length: 451
Alignm identity: 298
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 55, 176

Conread position: 161-661
Cow position:
Alignm length: 518
Alignm identity: 306
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 275

Conread position: 164-366
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 59

Conread position: 196-661
Cow position:
Alignm length: 484
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 341

Conread position: 203-604
Cow position:
Alignm length: 405
Alignm identity: 271
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 96, 152

Conread position: 203-661
Cow position:
Alignm length: 479
Alignm identity: 301
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 139

Conread position: 256-612
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 248

Conread position: 279-661
Cow position:
Alignm length: 392
Alignm identity: 244
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 194

Conread position: 296-662
Cow position:
Alignm length: 373
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 8

Conread position: 300-661
Cow position:
Alignm length: 371
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 50

Conread position: 303-661
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 48, 223

Conread position: 304-661
Cow position:
Alignm length: 365
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 65, 231

Conread position: 326-661
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 8

Conread position: 348-615
Cow position:
Alignm length: 271
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 176

Conread position: 355-661
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 21

Conread position: 357-660
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 19

Conread position: 370-661
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 80

Conread position: 403-526
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 403-661
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 129

Conread position: 403-661
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 120

Conread position: 404-616
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 119

Conread position: 415-655
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 108

Conread position: 415-661
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 116

Conread position: 434-661
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 88

Conread position: 459-661
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 72

Show alignments to all cow chromosomes.