Cow genome map
| Conread name: | Emb1-C0005196_A24 |
| Conread position: | 3-310 |
| Cow position: | chr13:21908179-21907879 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 3-329 |
| Cow position: | chr13:23002093-23001745 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 3-350 |
| Cow position: | chr13:15923464-15923094 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 3-356 |
| Cow position: | chr13:32546305-32546680 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-357 |
| Cow position: | chr13:34049657-34050028 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 3-484 |
| Cow position: | chr13:15543456-15543966 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 250 |
| Conread position: | 3-495 |
| Cow position: | chr13:31555827-31555320 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 357 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 3-602 |
| Cow position: | chr13:31732974-31732355 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 3-612 |
| Cow position: | chr13:21839279-21838657 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 3-615 |
| Cow position: | chr13:3653404-3652755 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 378 |
| Conread position: | 3-616 |
| Cow position: | chr13:678664-679302 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 3-616 |
| Cow position: | chr13:21697167-21697818 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 109 |
| Conread position: | 3-659 |
| Cow position: | chr13:13900783-13901463 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 355 |
| Conread position: | 3-659 |
| Cow position: | chr13:22184432-22183733 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 3-660 |
| Cow position: | chr13:4942298-4942985 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr13:9045681-9046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr13:13325844-13326524 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 3-661 |
| Cow position: | chr13:14402182-14401507 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 199 |
| Conread position: | 3-661 |
| Cow position: | chr13:31507830-31508507 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 3-661 |
| Cow position: | chr13:31611392-31610716 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 3-661 |
| Cow position: | chr13:31729980-31729305 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 327 |
| Conread position: | 3-661 |
| Cow position: | chr13:34041423-34040731 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-661 |
| Cow position: | chr13:35758198-35758879 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 3-662 |
| Cow position: | chr13:11797804-11797104 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 560 |
| Conread position: | 4-612 |
| Cow position: | chr13:11738836-11739461 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 4-662 |
| Cow position: | chr13:14177928-14177263 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 5-662 |
| Cow position: | chr13:26590362-26589719 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 424 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 11-595 |
| Cow position: | chr13:17330838-17330236 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 12-662 |
| Cow position: | chr13:34030545-34031195 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 17-300 |
| Cow position: | chr13:5625058-5624763 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 17-661 |
| Cow position: | chr13:6667203-6666538 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 17-661 |
| Cow position: | chr13:48358570-48359226 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 17-661 |
| Cow position: | chr13:50110381-50111059 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 18-661 |
| Cow position: | chr13:32924194-32923532 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 18-661 |
| Cow position: | chr13:34342835-34343507 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 347 |
| Conread position: | 19-378 |
| Cow position: | chr13:8796867-8796498 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 49-661 |
| Cow position: | chr13:33335330-33334720 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 104 |
| Conread position: | 82-661 |
| Cow position: | chr13:5500996-5500398 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 83-662 |
| Cow position: | chr13:37835320-37834723 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 84-662 |
| Cow position: | chr13:3482810-3482236 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 97-661 |
| Cow position: | chr13:42090671-42090092 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 290 |
| Conread position: | 122-661 |
| Cow position: | chr13:60648755-60648206 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 130-598 |
| Cow position: | chr13:42217625-42217146 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 138-661 |
| Cow position: | chr13:16253452-16252916 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 143-660 |
| Cow position: | chr13:33524883-33524356 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 151-661 |
| Cow position: | chr13:50193319-50192797 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 152-662 |
| Cow position: | chr13:47575165-47575690 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 61 |
| Conread position: | 184-661 |
| Cow position: | chr13:43981969-43981486 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 356 |
| Conread position: | 206-661 |
| Cow position: | chr13:60423886-60424346 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 163 |
| Conread position: | 213-661 |
| Cow position: | chr13:32736030-32735591 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 278-662 |
| Cow position: | chr13:11388207-11388595 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 291-660 |
| Cow position: | chr13:728457-728832 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 303-645 |
| Cow position: | chr13:29225836-29225495 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 355-596 |
| Cow position: | chr13:7725152-7724918 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 168 |
| Conread position: | 370-661 |
| Cow position: | chr13:30304507-30304798 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 370-661 |
| Cow position: | chr13:34869282-34869572 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 370-662 |
| Cow position: | chr13:9298756-9299048 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 413-661 |
| Cow position: | chr13:3760277-3760028 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 6, 111 |
Show alignments to all cow chromosomes.