Cow genome map


           Conread name:
           Emb1-C0005196_A24
        

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               3-390
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               30, 249
               

               Conread position:
               3-659
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 355
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 404
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 385
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 208
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 368
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 214
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 372
               

               Conread position:
               3-662
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 251
               

               Conread position:
               4-306
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               4-615
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 167
               

               Conread position:
               4-660
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               4-661
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               4-662
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 121
               

               Conread position:
               5-299
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               5-395
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               5-616
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               5-654
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               5-661
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 143
               

               Conread position:
               5-662
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               6-615
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 381
               

               Conread position:
               7-320
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 209
               

               Conread position:
               7-661
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               16-662
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               416
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               17-327
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               17-646
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               17-657
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 104
               

               Conread position:
               18-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               16, 182
               

               Conread position:
               18-606
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               396
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               18-615
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               18-661
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               19-228
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               21-661
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               33-428
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 213
               

               Conread position:
               33-661
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               414
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               82-645
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               82-661
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               114-661
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               117-661
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               121-661
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               358
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               91, 22
               

               Conread position:
               124-660
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               359
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               128-662
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               172, 326
               

               Conread position:
               154-661
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               335
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               156-661
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 243
               

               Conread position:
               189-659
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               110, 73
               

               Conread position:
               206-603
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               232-656
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               256-660
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               304-661
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               174, 72
               

               Conread position:
               313-662
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               371-659
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               103, 126
               

               Conread position:
               373-660
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               374-662
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               41, 251
               

               Conread position:
               385-612
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               387-661
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               410-661
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               429-661
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 39
               
Show alignments to all cow chromosomes.