Cow genome map
Conread name: | Emb1-C0005196_A24 |
Conread position: | 2-522 |
Cow position: | chr15:13677312-13677821 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 359 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 31, 120 |
Conread position: | 3-240 |
Cow position: | chr15:11597216-11596972 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 30, 101 |
Conread position: | 3-297 |
Cow position: | chr15:31860427-31860107 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 32, 72 |
Conread position: | 3-485 |
Cow position: | chr15:6079544-6080043 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 101 |
Conread position: | 3-598 |
Cow position: | chr15:24295877-24296496 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 213 |
Conread position: | 3-600 |
Cow position: | chr15:4197254-4197878 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 109 |
Conread position: | 3-607 |
Cow position: | chr15:4922937-4923563 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 52 |
Conread position: | 3-649 |
Cow position: | chr15:4823259-4823894 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 137 |
Conread position: | 3-652 |
Cow position: | chr15:9912438-9911771 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 108 |
Conread position: | 3-655 |
Cow position: | chr15:6383381-6382698 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 109 |
Conread position: | 3-659 |
Cow position: | chr15:2926100-2926763 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 106 |
Conread position: | 3-661 |
Cow position: | chr15:2077450-2078123 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 3-661 |
Cow position: | chr15:2646863-2646179 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 109 |
Conread position: | 3-661 |
Cow position: | chr15:3260528-3259847 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 3-661 |
Cow position: | chr15:4386547-4387231 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 13 |
Conread position: | 3-661 |
Cow position: | chr15:14581571-14580886 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 108 |
Conread position: | 3-661 |
Cow position: | chr15:17293840-17294523 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 446 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 34, 43 |
Conread position: | 3-661 |
Cow position: | chr15:18332036-18331363 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 156 |
Conread position: | 3-661 |
Cow position: | chr15:18577504-18578187 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 109 |
Conread position: | 3-661 |
Cow position: | chr15:19737263-19736581 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 3-661 |
Cow position: | chr15:21664951-21664268 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 213 |
Conread position: | 3-661 |
Cow position: | chr15:32493083-32492408 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 240 |
Conread position: | 3-661 |
Cow position: | chr15:35752527-35751831 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 536 |
Conread position: | 3-661 |
Cow position: | chr15:50123142-50122464 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 122 |
Conread position: | 3-662 |
Cow position: | chr15:5981141-5981833 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 109 |
Conread position: | 4-640 |
Cow position: | chr15:21450475-21451148 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 69 |
Conread position: | 4-661 |
Cow position: | chr15:11626479-11627144 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 86 |
Conread position: | 4-662 |
Cow position: | chr15:580223-580904 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 226 |
Conread position: | 5-352 |
Cow position: | chr15:6067384-6067025 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 263 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 29, 62 |
Conread position: | 5-421 |
Cow position: | chr15:12454026-12454470 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 307 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 28, 214 |
Conread position: | 5-604 |
Cow position: | chr15:4915984-4916588 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 407 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 74, 104 |
Conread position: | 5-661 |
Cow position: | chr15:7838055-7838743 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 550 |
Conread position: | 5-662 |
Cow position: | chr15:3182273-3181590 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 11-165 |
Cow position: | chr15:2214096-2213931 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 24, 101 |
Conread position: | 13-609 |
Cow position: | chr15:17217324-17216733 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 37 |
Conread position: | 15-344 |
Cow position: | chr15:50056833-50057186 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 241 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 110 |
Conread position: | 16-525 |
Cow position: | chr15:4679063-4679617 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 368 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 21, 59 |
Conread position: | 16-555 |
Cow position: | chr15:7550947-7551508 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 383 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 18, 95 |
Conread position: | 17-661 |
Cow position: | chr15:58463-59126 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 353 |
Conread position: | 17-662 |
Cow position: | chr15:8100274-8100926 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 94 |
Conread position: | 18-649 |
Cow position: | chr15:4962442-4963076 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 151 |
Conread position: | 18-661 |
Cow position: | chr15:11293628-11292965 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 103 |
Conread position: | 18-661 |
Cow position: | chr15:15346306-15345633 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 533 |
Conread position: | 18-661 |
Cow position: | chr15:24794630-24795291 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 340 |
Conread position: | 18-661 |
Cow position: | chr15:31359678-31360336 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 243 |
Conread position: | 19-445 |
Cow position: | chr15:6485388-6485837 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 303 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 19, 211 |
Conread position: | 19-661 |
Cow position: | chr15:1765111-1765789 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 293 |
Conread position: | 20-360 |
Cow position: | chr15:6367993-6367617 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 255 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 20-662 |
Cow position: | chr15:4813409-4814065 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 92 |
Conread position: | 32-661 |
Cow position: | chr15:7965137-7964469 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 363 |
Conread position: | 33-616 |
Cow position: | chr15:25654249-25653633 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 76 |
Conread position: | 33-661 |
Cow position: | chr15:2901441-2900786 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 350 |
Conread position: | 33-661 |
Cow position: | chr15:9430764-9431409 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 417 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 66, 14 |
Conread position: | 35-649 |
Cow position: | chr15:4766010-4766654 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 161 |
Conread position: | 35-661 |
Cow position: | chr15:329155-329803 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 411 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 52, 72 |
Conread position: | 50-661 |
Cow position: | chr15:41659018-41659642 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 486 |
Conread position: | 82-661 |
Cow position: | chr15:2588573-2587973 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 82-661 |
Cow position: | chr15:20411475-20412070 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 20 |
Conread position: | 82-662 |
Cow position: | chr15:7563872-7564473 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 20 |
Conread position: | 85-661 |
Cow position: | chr15:17036784-17036185 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 17 |
Conread position: | 85-662 |
Cow position: | chr15:9003323-9002747 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 119-662 |
Cow position: | chr15:8058889-8059442 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 247 |
Conread position: | 121-615 |
Cow position: | chr15:51218643-51219150 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 251 |
Conread position: | 130-661 |
Cow position: | chr15:4726137-4726677 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 115 |
Conread position: | 130-661 |
Cow position: | chr15:6479328-6479854 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 12 |
Conread position: | 136-661 |
Cow position: | chr15:32067670-32067135 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 31 |
Conread position: | 136-661 |
Cow position: | chr15:36668662-36669170 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 53 |
Conread position: | 143-661 |
Cow position: | chr15:6591170-6590642 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 5 |
Conread position: | 148-662 |
Cow position: | chr15:26156788-26157307 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 64 |
Conread position: | 157-661 |
Cow position: | chr15:24288511-24287989 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 36 |
Conread position: | 157-661 |
Cow position: | chr15:33122334-33122854 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 380 |
Conread position: | 188-661 |
Cow position: | chr15:51613111-51613611 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 10 |
Conread position: | 189-607 |
Cow position: | chr15:17077574-17077146 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 281 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 23, 347 |
Conread position: | 190-661 |
Cow position: | chr15:10478533-10478055 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 319 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 196-661 |
Cow position: | chr15:106996-107475 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 341 |
Conread position: | 196-661 |
Cow position: | chr15:35898781-35898300 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 341 |
Conread position: | 214-661 |
Cow position: | chr15:6561601-6562061 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 322 |
Conread position: | 219-662 |
Cow position: | chr15:25205984-25205531 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 240-607 |
Cow position: | chr15:1833598-1833221 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 250 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 19, 223 |
Conread position: | 267-613 |
Cow position: | chr15:6613793-6614145 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 234 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 33, 238 |
Conread position: | 282-662 |
Cow position: | chr15:50869425-50869809 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 248 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 19, 249 |
Conread position: | 283-661 |
Cow position: | chr15:13390228-13389850 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 239 |
Conread position: | 291-659 |
Cow position: | chr15:33494761-33495122 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 235 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 184, 18 |
Conread position: | 297-615 |
Cow position: | chr15:8698819-8698511 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 25, 44 |
Conread position: | 362-660 |
Cow position: | chr15:6552606-6552307 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 196 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 116, 161 |
Conread position: | 370-661 |
Cow position: | chr15:17122052-17122348 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 206 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 385-658 |
Cow position: | chr15:31859758-31859485 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 186 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 94, 147 |
Conread position: | 403-661 |
Cow position: | chr15:1783547-1783805 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 178 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 74, 120 |
Conread position: | 403-661 |
Cow position: | chr15:2018335-2018591 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 403-661 |
Cow position: | chr15:4081019-4080761 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 178 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 75, 120 |
Show alignments to all cow chromosomes.