Cow genome map

Conread name: Emb1-C0005196_A24

Conread position: 2-522
Cow position:
Alignm length: 538
Alignm identity: 359
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 120

Conread position: 3-240
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 101

Conread position: 3-297
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 72

Conread position: 3-485
Cow position:
Alignm length: 507
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 101

Conread position: 3-598
Cow position:
Alignm length: 630
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 213

Conread position: 3-600
Cow position:
Alignm length: 633
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-607
Cow position:
Alignm length: 632
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 3-649
Cow position:
Alignm length: 659
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 137

Conread position: 3-652
Cow position:
Alignm length: 685
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 108

Conread position: 3-655
Cow position:
Alignm length: 694
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 3-659
Cow position:
Alignm length: 686
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 109

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 3-661
Cow position:
Alignm length: 695
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 3-661
Cow position:
Alignm length: 699
Alignm identity: 446
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 43

Conread position: 3-661
Cow position:
Alignm length: 683
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 156

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 3-661
Cow position:
Alignm length: 691
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-661
Cow position:
Alignm length: 690
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 213

Conread position: 3-661
Cow position:
Alignm length: 687
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 240

Conread position: 3-661
Cow position:
Alignm length: 702
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 536

Conread position: 3-661
Cow position:
Alignm length: 693
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 3-662
Cow position:
Alignm length: 700
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 109

Conread position: 4-640
Cow position:
Alignm length: 677
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 69

Conread position: 4-661
Cow position:
Alignm length: 686
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 4-662
Cow position:
Alignm length: 691
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 226

Conread position: 5-352
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 62

Conread position: 5-421
Cow position:
Alignm length: 447
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 214

Conread position: 5-604
Cow position:
Alignm length: 628
Alignm identity: 407
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 74, 104

Conread position: 5-661
Cow position:
Alignm length: 693
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 550

Conread position: 5-662
Cow position:
Alignm length: 698
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 51

Conread position: 11-165
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 101

Conread position: 13-609
Cow position:
Alignm length: 619
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 15-344
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 110

Conread position: 16-525
Cow position:
Alignm length: 559
Alignm identity: 368
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 59

Conread position: 16-555
Cow position:
Alignm length: 579
Alignm identity: 383
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 95

Conread position: 17-661
Cow position:
Alignm length: 669
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 353

Conread position: 17-662
Cow position:
Alignm length: 676
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 18-649
Cow position:
Alignm length: 652
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 18-661
Cow position:
Alignm length: 680
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 103

Conread position: 18-661
Cow position:
Alignm length: 678
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 533

Conread position: 18-661
Cow position:
Alignm length: 667
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 340

Conread position: 18-661
Cow position:
Alignm length: 668
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 243

Conread position: 19-445
Cow position:
Alignm length: 455
Alignm identity: 303
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 19, 211

Conread position: 19-661
Cow position:
Alignm length: 688
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 293

Conread position: 20-360
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 20-662
Cow position:
Alignm length: 670
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 32-661
Cow position:
Alignm length: 683
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 363

Conread position: 33-616
Cow position:
Alignm length: 621
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 76

Conread position: 33-661
Cow position:
Alignm length: 661
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 350

Conread position: 33-661
Cow position:
Alignm length: 657
Alignm identity: 417
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 14

Conread position: 35-649
Cow position:
Alignm length: 650
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 161

Conread position: 35-661
Cow position:
Alignm length: 659
Alignm identity: 411
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 72

Conread position: 50-661
Cow position:
Alignm length: 629
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 486

Conread position: 82-661
Cow position:
Alignm length: 607
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 82-661
Cow position:
Alignm length: 603
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 82-662
Cow position:
Alignm length: 607
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 85-661
Cow position:
Alignm length: 606
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 17

Conread position: 85-662
Cow position:
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 119-662
Cow position:
Alignm length: 564
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 247

Conread position: 121-615
Cow position:
Alignm length: 514
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 251

Conread position: 130-661
Cow position:
Alignm length: 549
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 115

Conread position: 130-661
Cow position:
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 12

Conread position: 136-661
Cow position:
Alignm length: 543
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 31

Conread position: 136-661
Cow position:
Alignm length: 530
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 53

Conread position: 143-661
Cow position:
Alignm length: 534
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 5

Conread position: 148-662
Cow position:
Alignm length: 536
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 64

Conread position: 157-661
Cow position:
Alignm length: 528
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 157-661
Cow position:
Alignm length: 525
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 380

Conread position: 188-661
Cow position:
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 189-607
Cow position:
Alignm length: 434
Alignm identity: 281
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 347

Conread position: 190-661
Cow position:
Alignm length: 492
Alignm identity: 319
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 9

Conread position: 196-661
Cow position:
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 341

Conread position: 196-661
Cow position:
Alignm length: 486
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 341

Conread position: 214-661
Cow position:
Alignm length: 465
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 322

Conread position: 219-662
Cow position:
Alignm length: 459
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 240-607
Cow position:
Alignm length: 383
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 223

Conread position: 267-613
Cow position:
Alignm length: 358
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 238

Conread position: 282-662
Cow position:
Alignm length: 391
Alignm identity: 248
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 249

Conread position: 283-661
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 239

Conread position: 291-659
Cow position:
Alignm length: 372
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 184, 18

Conread position: 297-615
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 44

Conread position: 362-660
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 116, 161

Conread position: 370-661
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 107, 0

Conread position: 385-658
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 147

Conread position: 403-661
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 120

Conread position: 403-661
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 25

Conread position: 403-661
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 120

Show alignments to all cow chromosomes.